CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
extracellular 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, extracellular, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	extracellular
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d018525_P004	Maize	cytosol	96.76	90.87
Os02t0826600-01	Rice	cytosol	87.54	87.54
TraesCS6D01G393300.1	Wheat	cytosol	84.3	84.3
HORVU6Hr1G093360.11	Barley	nucleus	53.07	83.83
TraesCS6B01G456300.1	Wheat	cytosol	83.62	83.76
TraesCS6A01G410200.1	Wheat	cytosol, plasma membrane, plastid	84.98	76.85
GSMUA_Achr4P04360_001	Banana	cytosol	70.14	70.26
VIT_19s0014g03000.t01	Wine grape	cytosol, mitochondrion	65.19	65.41
KRH22120	Soybean	cytosol	64.33	64.67
Solyc10g006930.2.1	Tomato	cytosol	63.99	64.21
KRH27219	Soybean	cytosol	64.16	64.16
Bra027245.1-P	Field mustard	nucleus	63.82	63.93
CDY56828	Canola	nucleus	63.48	63.59
CDX97667	Canola	nucleus	63.31	63.42
AT3G15410.2	Thale cress	cytosol, mitochondrion, nucleus	63.65	63.22
EER95291	Sorghum	cytosol	11.6	25.95
KXG27059	Sorghum	cytosol, nucleus, plastid	14.68	23.69
EER94139	Sorghum	cytosol	12.46	19.52
EES10994	Sorghum	plastid	16.21	18.59
EES05350	Sorghum	plastid	15.87	18.49
KXG38871	Sorghum	cytosol	14.33	15.61
EES14257	Sorghum	nucleus	15.19	15.4

Protein Annotations

Gene3D:3.80.10.10	MapMan:35.1	EntrezGene:8084446	UniProt:C5XWM7	ncoils:Coil	EnsemblPlants:EES07794
ProteinID:EES07794	ProteinID:EES07794.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0009987
GO:GO:0016020	InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp
PFAM:PF13855	PRINTS:PR00019	PFscan:PS51450	PANTHER:PTHR44126	SMART:SM00364	SMART:SM00369
EnsemblPlantsGene:SORBI_3004G353400	SUPFAM:SSF52058	unigene:Sbi.1041	UniParc:UPI0001A86158	RefSeq:XP_002454818.1	SEG:seg

Description

hypothetical protein

Coordinates

chr4:-:68146887..68152858

Molecular Weight (calculated)

63859.5 Da

IEP (calculated)

6.538

GRAVY (calculated)

-0.060

Length

586 amino acids

Sequence
(BLAST)

001: MERILKSARE SGSLNLSNRS LREIPKEVYN NLDTGSQDEK WWEGVDLQKL ILAHNNLEVL REDLRNLSSL VVLNISHNNI SSLPAAIGDL PLLKSLDISF
101: NQINTLPEEI GLATALVKVD FSNNFLTELP PSLAKCPDLS ELKASNNNIS RIPDVLAGCS KLSKLDLEGN KLVMLSENMF VSWTMLTELN LAKNLLTAIP
201: SSIGALPKLI RLDMHQNKIT SIPPSIKGCS SLAEFYMGNN LLSSIPADIG MLSKLGILDL HSNQLKEYPV GACNLKLSFL DLSNNSLSGL PAELGKMTTL
301: RKLLLTGNPM RTLRSSLVSG PTTTLLKYLR SRLSSDEEAS GSGSTPTKDD QIAAARRLSL SSKELDLSGL GVTSVPAAAW ETSDVVKLDL SKNSIEDLPN
401: ELSLCSSLQS LVLSNNKIKK WPRTVVSSLP SLSSLKLDNN PLVEISSTDL VPLSKLEVLD LSGNASALPE PSAVSALPQL HELYLRRMKL HEFPNGLLGL
501: KQLRILDLSQ NSLTTVPEGI KNFTALIELD LSDNNITALP AELGLLEANL QVLKLDGNPL RSIRRTLLER GTKAILKYLK EKLPAE

Best Arabidopsis Sequence Match ( AT3G15410.1 )
(BLAST)

001: MDRILKAART SGSLNLSNRS LKDVPTEVYQ CLETTGEGEN WWEAVDLQKL ILAHNDIEVL REDLKNLACL VVLNVSHNKL SQLPAAIGEL TAMKSLDVSF
101: NSISELPEQI GSAISLVKLD CSSNRLKELP DSIGRCLDLS DLKATNNQIS SLPEDMVNCS KLSKLDVEGN KLTALSENHI ASWTMLAELN ACKNMLGVLP
201: QNIGSLSRLI RLDLHQNKIS SVPPSIGGCS SLVEFYLGIN SLSTLPAEIG DLSRLGTLDL RSNQLKEYPV GACKLKLSYL DLSNNSLTGL HPELGNMTTL
301: RKLVLVGNPL RTLRSSLVNG PTAALLKYLR SRLSNSEETS ASTPTKENVI ASAARMSISS KELSLEGLNL SDVPSEVWES GEITKVNLSK NSIEELPAQL
401: STSVSLQTLI LSRNKIKDWP GAILKSLPNL MCLKLDNNPL NQIPLDGFQV VSGLQILDLS VNAVSFREHP KFCHLPQLRE LYLSRIQLSE VPEDILNLSN
501: LIILDLNQNS LQSIPKGIKN MTSLKHLDIS NNNISSLPPE LGLLEPTLEV LRLDGNPLRS IRRPILERGT KAVLNYLKDR LPDQ

Arabidopsis Description

Leucine-rich repeat (LRR) family protein [Source:UniProtKB/TrEMBL;Acc:F4IYR7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.