Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- extracellular 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_19s0014g03000.t01 | Wine grape | cytosol, mitochondrion | 72.6 | 72.6 |
| KRH22120 | Soybean | cytosol | 70.21 | 70.33 |
| KRH27219 | Soybean | cytosol | 70.38 | 70.14 |
| Bra027245.1-P | Field mustard | nucleus | 69.18 | 69.06 |
| CDY56828 | Canola | nucleus | 68.84 | 68.72 |
| CDX97667 | Canola | nucleus | 68.66 | 68.55 |
| GSMUA_Achr4P04360_001 | Banana | cytosol | 67.81 | 67.69 |
| AT3G15410.2 | Thale cress | cytosol, mitochondrion, nucleus | 67.81 | 67.12 |
| Os02t0826600-01 | Rice | cytosol | 66.27 | 66.04 |
| EES07794 | Sorghum | cytosol | 64.21 | 63.99 |
| TraesCS6B01G456300.1 | Wheat | cytosol | 63.53 | 63.42 |
| TraesCS6D01G393300.1 | Wheat | cytosol | 63.53 | 63.31 |
| HORVU6Hr1G093360.11 | Barley | nucleus | 39.9 | 62.8 |
| Zm00001d018525_P004 | Maize | cytosol | 64.21 | 60.1 |
| TraesCS6A01G410200.1 | Wheat | cytosol, plasma membrane, plastid | 63.53 | 57.25 |
| Solyc03g115410.2.1 | Tomato | cytosol | 12.5 | 28.19 |
| Solyc12g040320.1.1 | Tomato | mitochondrion | 11.82 | 26.44 |
| Solyc12g017480.1.1 | Tomato | cytosol | 13.18 | 21.15 |
| Solyc06g007250.2.1 | Tomato | cytosol | 11.99 | 18.67 |
| Solyc03g112270.2.1 | Tomato | cytosol, nucleus, plastid | 16.44 | 18.25 |
| Solyc02g082350.2.1 | Tomato | nucleus | 16.61 | 16.81 |
| Solyc08g006970.2.1 | Tomato | cytosol | 13.53 | 15.55 |
Protein Annotations
| EnsemblPlants:Solyc10g006930.2.1 | EnsemblPlantsGene:Solyc10g006930.2 | Gene3D:3.80.10.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR001611 | InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt | InterPro:Leu-rich_rpt_typical-subtyp | PANTHER:PTHR44126 |
| PFAM:PF13855 | PFscan:PS51450 | PRINTS:PR00019 | SEG:seg | SMART:SM00364 | SMART:SM00365 |
| SMART:SM00369 | SUPFAM:SSF52058 | UniParc:UPI000276AFB9 | UniProt:K4CXM3 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr10:-:1360016..1371881
Molecular Weight (calculated)
63743.2 Da
IEP (calculated)
5.750
GRAVY (calculated)
-0.039
Length
584 amino acids
Sequence
(BLAST)
(BLAST)
001: MDRVIKAART SGSLNLSNRS LSEVPIDIYK SLDAASEDEK WWEAVELQKL ILAHNDIETL QEDIRNLPLL SVLNVSHNKL THLPSAIGEL HMLKSLDVSF
101: NLIVNIPEEI GTAASLVKLD CSNNQLNDLP NSLGRCVELS DLKASNNSIS SLSADLAKCS KLTKLDVEGN KLTTLPESLV ASCRMLTELN ASKNLLNSIP
201: ENIGSLSRLI RLDLHQNRIS LIPSSIKDCS SLLEFYIGNN ALTSLPVEIG TLNRLGIFDL HSNQLKEYPA EACKLQLSML DLSNNSLSGL PPDIGLMTTL
301: RKLLLAGNPI RTLRSSLVNG PTPALLRFLR SRLPTDEESA TSTPGKDDVV AKAARLSLSS KELSLGGLGL TAVPSDVWKS NDISKCDLSG NSIEELPLEL
401: SSCISLEALI LSKNKIKDWP GSVLTSLPAL TCLKLDNNSL RQIPSSAFQA VSKLQVLDLS GNIGSLPEHP VFSCLAELQE LYLRRMRVSV FPSDIINLKQ
501: LRILDLSQNS LQSIPQGIEN LTSLAELDLS DNNISSLPPE LGLLEPSLQV LKLEGNPLRS IRRAILDRGT KGVLKYLKER IVEH
101: NLIVNIPEEI GTAASLVKLD CSNNQLNDLP NSLGRCVELS DLKASNNSIS SLSADLAKCS KLTKLDVEGN KLTTLPESLV ASCRMLTELN ASKNLLNSIP
201: ENIGSLSRLI RLDLHQNRIS LIPSSIKDCS SLLEFYIGNN ALTSLPVEIG TLNRLGIFDL HSNQLKEYPA EACKLQLSML DLSNNSLSGL PPDIGLMTTL
301: RKLLLAGNPI RTLRSSLVNG PTPALLRFLR SRLPTDEESA TSTPGKDDVV AKAARLSLSS KELSLGGLGL TAVPSDVWKS NDISKCDLSG NSIEELPLEL
401: SSCISLEALI LSKNKIKDWP GSVLTSLPAL TCLKLDNNSL RQIPSSAFQA VSKLQVLDLS GNIGSLPEHP VFSCLAELQE LYLRRMRVSV FPSDIINLKQ
501: LRILDLSQNS LQSIPQGIEN LTSLAELDLS DNNISSLPPE LGLLEPSLQV LKLEGNPLRS IRRAILDRGT KGVLKYLKER IVEH
001: MDRILKAART SGSLNLSNRS LKDVPTEVYQ CLETTGEGEN WWEAVDLQKL ILAHNDIEVL REDLKNLACL VVLNVSHNKL SQLPAAIGEL TAMKSLDVSF
101: NSISELPEQI GSAISLVKLD CSSNRLKELP DSIGRCLDLS DLKATNNQIS SLPEDMVNCS KLSKLDVEGN KLTALSENHI ASWTMLAELN ACKNMLGVLP
201: QNIGSLSRLI RLDLHQNKIS SVPPSIGGCS SLVEFYLGIN SLSTLPAEIG DLSRLGTLDL RSNQLKEYPV GACKLKLSYL DLSNNSLTGL HPELGNMTTL
301: RKLVLVGNPL RTLRSSLVNG PTAALLKYLR SRLSNSEETS ASTPTKENVI ASAARMSISS KELSLEGLNL SDVPSEVWES GEITKVNLSK NSIEELPAQL
401: STSVSLQTLI LSRNKIKDWP GAILKSLPNL MCLKLDNNPL NQIPLDGFQV VSGLQILDLS VNAVSFREHP KFCHLPQLRE LYLSRIQLSE VPEDILNLSN
501: LIILDLNQNS LQSIPKGIKN MTSLKHLDIS NNNISSLPPE LGLLEPTLEV LRLDGNPLRS IRRPILERGT KAVLNYLKDR LPDQ
101: NSISELPEQI GSAISLVKLD CSSNRLKELP DSIGRCLDLS DLKATNNQIS SLPEDMVNCS KLSKLDVEGN KLTALSENHI ASWTMLAELN ACKNMLGVLP
201: QNIGSLSRLI RLDLHQNKIS SVPPSIGGCS SLVEFYLGIN SLSTLPAEIG DLSRLGTLDL RSNQLKEYPV GACKLKLSYL DLSNNSLTGL HPELGNMTTL
301: RKLVLVGNPL RTLRSSLVNG PTAALLKYLR SRLSNSEETS ASTPTKENVI ASAARMSISS KELSLEGLNL SDVPSEVWES GEITKVNLSK NSIEELPAQL
401: STSVSLQTLI LSRNKIKDWP GAILKSLPNL MCLKLDNNPL NQIPLDGFQV VSGLQILDLS VNAVSFREHP KFCHLPQLRE LYLSRIQLSE VPEDILNLSN
501: LIILDLNQNS LQSIPKGIKN MTSLKHLDIS NNNISSLPPE LGLLEPTLEV LRLDGNPLRS IRRPILERGT KAVLNYLKDR LPDQ
Arabidopsis Description
Leucine-rich repeat (LRR) family protein [Source:UniProtKB/TrEMBL;Acc:F4IYR7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.