Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, plastid, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- plastid 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G393300.1 | Wheat | cytosol | 88.27 | 97.61 |
| TraesCS6B01G456300.1 | Wheat | cytosol | 86.73 | 96.07 |
| HORVU6Hr1G093360.11 | Barley | nucleus | 54.94 | 95.96 |
| EES07794 | Sorghum | cytosol | 76.85 | 84.98 |
| Os02t0826600-01 | Rice | cytosol | 73.77 | 81.57 |
| Zm00001d018525_P004 | Maize | cytosol | 76.85 | 79.81 |
| GSMUA_Achr4P04360_001 | Banana | cytosol | 63.12 | 69.91 |
| KRH22120 | Soybean | cytosol | 58.64 | 65.18 |
| KRH27219 | Soybean | cytosol | 58.8 | 65.02 |
| VIT_19s0014g03000.t01 | Wine grape | cytosol, mitochondrion | 58.02 | 64.38 |
| Solyc10g006930.2.1 | Tomato | cytosol | 57.25 | 63.53 |
| Bra027245.1-P | Field mustard | nucleus | 57.1 | 63.25 |
| CDY56828 | Canola | nucleus | 56.94 | 63.08 |
| CDX97667 | Canola | nucleus | 56.79 | 62.91 |
| AT3G15410.2 | Thale cress | cytosol, mitochondrion, nucleus | 56.94 | 62.54 |
| TraesCS2A01G432800.1 | Wheat | cytosol, nucleus, plastid | 12.65 | 22.47 |
| TraesCS4A01G055400.1 | Wheat | nucleus | 10.8 | 20.65 |
| TraesCS2A01G327100.1 | Wheat | cytosol, plastid | 14.66 | 18.89 |
| TraesCS1A01G142500.1 | Wheat | cytosol | 10.8 | 18.77 |
| TraesCS1A01G190500.1 | Wheat | cytosol | 13.27 | 16.1 |
| TraesCS7A01G247900.2 | Wheat | cytosol | 14.04 | 15.96 |
Protein Annotations
| EnsemblPlants:TraesCS6A01G410200.1 | EnsemblPlantsGene:TraesCS6A01G410200 | Gene3D:3.80.10.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR001611 | InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt | InterPro:Leu-rich_rpt_typical-subtyp | ncoils:Coil |
| PANTHER:PTHR44126 | PFAM:PF13855 | PFscan:PS51450 | PRINTS:PR00019 | SEG:seg | SMART:SM00364 |
| SMART:SM00369 | SUPFAM:SSF52058 | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr6A:-:613615858..613622703
Molecular Weight (calculated)
70347.5 Da
IEP (calculated)
6.681
GRAVY (calculated)
-0.029
Length
648 amino acids
Sequence
(BLAST)
(BLAST)
001: MLERILTIEP VDPLDFCFPK PLAAGPAGLL LPAALPLLLA VAIAARRQWR SEGPPSAGSS TRMERILKSA RESGSLNLSN RSLSEVPGEV YNNLDTGSLD
101: DKWWEGVDLQ KLILAHNNLE VLREDLRNLS SLVVLNISHN QISSLPAAIG DLPLLKSLDA SFNQIKLIPE EVGLATALVK VDFSNNCLTE LPASLGRCLN
201: LSELKASNNN ISRLPDELAG CCKLSKFDLE GNKLVLLPEN MFTSWTLLTE LNAAKNQLTA IPASIGALSK LVRMDLHQNK ITSIPSSIKG CSSLAEFYMG
301: NNLLSTIPDD IGMLSKLGTL DLHSNQLKEY PVGACKLKLS FLDLSNNALS GLPPELGTMT TLRKLLLSGN PMRALRSSLV SGPTSTLMKY LRSRLSADVE
401: ASGSRTTPTK DDQISAARRL SVSSKELNLS GLGVPNVPPA AWETSDVVKL DLSKNLIEDL PNELSLCSSL QSLILSNNKI KKWPGMVVSS LPSLTSLKLD
501: NNPLAEISPT DLDSLSKLEI LDLSGNASSL SEPSVVSSLP QLQELYLRRM KLQEFPIGLV QLKHLRILNL SQNNLSTIPE GIKDFSALIE LDLSDNNITR
601: LPAELGLLEP SLQVLKLDGN PLRSIRRTVL ERGTKAVLSY LKEKLPSN
101: DKWWEGVDLQ KLILAHNNLE VLREDLRNLS SLVVLNISHN QISSLPAAIG DLPLLKSLDA SFNQIKLIPE EVGLATALVK VDFSNNCLTE LPASLGRCLN
201: LSELKASNNN ISRLPDELAG CCKLSKFDLE GNKLVLLPEN MFTSWTLLTE LNAAKNQLTA IPASIGALSK LVRMDLHQNK ITSIPSSIKG CSSLAEFYMG
301: NNLLSTIPDD IGMLSKLGTL DLHSNQLKEY PVGACKLKLS FLDLSNNALS GLPPELGTMT TLRKLLLSGN PMRALRSSLV SGPTSTLMKY LRSRLSADVE
401: ASGSRTTPTK DDQISAARRL SVSSKELNLS GLGVPNVPPA AWETSDVVKL DLSKNLIEDL PNELSLCSSL QSLILSNNKI KKWPGMVVSS LPSLTSLKLD
501: NNPLAEISPT DLDSLSKLEI LDLSGNASSL SEPSVVSSLP QLQELYLRRM KLQEFPIGLV QLKHLRILNL SQNNLSTIPE GIKDFSALIE LDLSDNNITR
601: LPAELGLLEP SLQVLKLDGN PLRSIRRTVL ERGTKAVLSY LKEKLPSN
001: MDRILKAART SGSLNLSNRS LKDVPTEVYQ CLETTGEGEN WWEAVDLQKL ILAHNDIEVL REDLKNLACL VVLNVSHNKL SQLPAAIGEL TAMKSLDVSF
101: NSISELPEQI GSAISLVKLD CSSNRLKELP DSIGRCLDLS DLKATNNQIS SLPEDMVNCS KLSKLDVEGN KLTALSENHI ASWTMLAELN ACKNMLGVLP
201: QNIGSLSRLI RLDLHQNKIS SVPPSIGGCS SLVEFYLGIN SLSTLPAEIG DLSRLGTLDL RSNQLKEYPV GACKLKLSYL DLSNNSLTGL HPELGNMTTL
301: RKLVLVGNPL RTLRSSLVNG PTAALLKYLR SRLSNSEETS ASTPTKENVI ASAARMSISS KELSLEGLNL SDVPSEVWES GEITKVNLSK NSIEELPAQL
401: STSVSLQTLI LSRNKIKDWP GAILKSLPNL MCLKLDNNPL NQIPLDGFQV VSGLQILDLS VNAVSFREHP KFCHLPQLRE LYLSRIQLSE VPEDILNLSN
501: LIILDLNQNS LQSIPKGIKN MTSLKHLDIS NNNISSLPPE LGLLEPTLEV LRLDGNPLRS IRRPILERGT KAVLNYLKDR LPDQ
101: NSISELPEQI GSAISLVKLD CSSNRLKELP DSIGRCLDLS DLKATNNQIS SLPEDMVNCS KLSKLDVEGN KLTALSENHI ASWTMLAELN ACKNMLGVLP
201: QNIGSLSRLI RLDLHQNKIS SVPPSIGGCS SLVEFYLGIN SLSTLPAEIG DLSRLGTLDL RSNQLKEYPV GACKLKLSYL DLSNNSLTGL HPELGNMTTL
301: RKLVLVGNPL RTLRSSLVNG PTAALLKYLR SRLSNSEETS ASTPTKENVI ASAARMSISS KELSLEGLNL SDVPSEVWES GEITKVNLSK NSIEELPAQL
401: STSVSLQTLI LSRNKIKDWP GAILKSLPNL MCLKLDNNPL NQIPLDGFQV VSGLQILDLS VNAVSFREHP KFCHLPQLRE LYLSRIQLSE VPEDILNLSN
501: LIILDLNQNS LQSIPKGIKN MTSLKHLDIS NNNISSLPPE LGLLEPTLEV LRLDGNPLRS IRRPILERGT KAVLNYLKDR LPDQ
Arabidopsis Description
Leucine-rich repeat (LRR) family protein [Source:UniProtKB/TrEMBL;Acc:F4IYR7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.