CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
extracellular 1
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH22120	Soybean	cytosol	94.88	95.37
VIT_19s0014g03000.t01	Wine grape	cytosol, mitochondrion	76.45	76.71
Bra027245.1-P	Field mustard	nucleus	71.5	71.62
CDX97667	Canola	nucleus	70.99	71.11
CDY56828	Canola	nucleus	70.82	70.94
AT3G15410.2	Thale cress	cytosol, mitochondrion, nucleus	71.33	70.85
Solyc10g006930.2.1	Tomato	cytosol	70.14	70.38
GSMUA_Achr4P04360_001	Banana	cytosol	68.6	68.72
HORVU6Hr1G093360.11	Barley	nucleus	41.47	65.5
TraesCS6D01G393300.1	Wheat	cytosol	65.19	65.19
TraesCS6B01G456300.1	Wheat	cytosol	64.85	64.96
Os02t0826600-01	Rice	cytosol	64.51	64.51
EES07794	Sorghum	cytosol	64.16	64.16
Zm00001d018525_P004	Maize	cytosol	63.99	60.1
TraesCS6A01G410200.1	Wheat	cytosol, plasma membrane, plastid	65.02	58.8
KRH54661	Soybean	cytosol	12.46	27.97
KRH63260	Soybean	cytosol	12.29	27.59
KRH74520	Soybean	cytosol	17.24	21.91
KRH37361	Soybean	cytosol	13.14	21.69
KRH02753	Soybean	cytosol	13.14	21.39
KRH58211	Soybean	mitochondrion	8.53	21.19
KRH12356	Soybean	cytosol	12.97	20.94
KRH63625	Soybean	nucleus	17.41	19.88
KRH57134	Soybean	plastid	16.55	18.98
KRH39397	Soybean	nucleus	17.75	18.87
KRH07815	Soybean	cytosol	17.41	18.61
KRG98234	Soybean	cytosol	11.26	17.6
KRH28950	Soybean	cytosol	16.72	17.28
KRH04326	Soybean	cytosol	15.19	17.18
KRH76512	Soybean	nucleus	16.72	17.07
KRH30190	Soybean	cytosol, nucleus, peroxisome, plastid	8.7	16.19

Protein Annotations

EntrezGene:100788118	Gene3D:3.80.10.10	MapMan:35.1	EMBL:ACUP02007787	EnsemblPlantsGene:GLYMA_12G222700	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0007154
GO:GO:0007165	GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	UniProt:I1LUZ1	InterPro:IPR001611
InterPro:IPR032675	EnsemblPlants:KRH27219	ProteinID:KRH27219	ProteinID:KRH27219.1	InterPro:LRR_5	InterPro:LRR_dom_sf
InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	PFAM:PF00560	PFAM:PF13306	PFAM:PF13855	PRINTS:PR00019
PFscan:PS51450	PANTHER:PTHR44126	SMART:SM00364	SMART:SM00369	SUPFAM:SSF52058	UniParc:UPI000233CA32
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr12:-:38238390..38251827

Molecular Weight (calculated)

64082.9 Da

IEP (calculated)

5.189

GRAVY (calculated)

-0.022

Length

586 amino acids

Sequence
(BLAST)

001: MDRLLKAARA SGSLNLSNRS LTEIPDEVYR NLEGLGGGDD KWWEAVELQK LILAHNSIAS LKEDLRNLPF LAVLNLSHNS LSQLPAAIGE LPQLKMLDVS
101: FNSIVNIPEE IGSAMSLVKL DCSNNQLTEL PSSLGRCLEL SDLKGSNNLI TSLPEDLANC SKLSKLDMEG NKLTVISENL ISSWTMLTEF NASKNLLNGI
201: PTSIGGLSRL IRVYVHQNRI SAIPSSIIGC HSLTELYLGN NNISTLPVEI GALSRLGTLD LHSNQLKDYP VEACKLSLLV LDLSNNSLSG LPPEMGKMTT
301: LRKLLLSGNP MRTLRSSLVS GPTPALLKFL RSRLSEDEDS EAVTTTKEVI AMATRLSITS KELSMEGLGL SAVPSEVWES GEVIKLNLSR NSIQELPVEL
401: SSCVSLQTLI LSKNQIKEWP GSILKSLSSL SCLKLDNNPL KQIPLDGFEV VPKLQILDLS GNAASLLDVP AFSSLPYLQE LYLRRMRLSE VPSDIVGLQQ
501: LRILDLSQNS LQSIPVGLKD LTSLKELDLS NNNISVLLPE LGLLEPSLQA LRLDGNPLRS IRRTVLDRGT KAVLQYLKDK LPEQEQ

Best Arabidopsis Sequence Match ( AT3G15410.1 )
(BLAST)

001: MDRILKAART SGSLNLSNRS LKDVPTEVYQ CLETTGEGEN WWEAVDLQKL ILAHNDIEVL REDLKNLACL VVLNVSHNKL SQLPAAIGEL TAMKSLDVSF
101: NSISELPEQI GSAISLVKLD CSSNRLKELP DSIGRCLDLS DLKATNNQIS SLPEDMVNCS KLSKLDVEGN KLTALSENHI ASWTMLAELN ACKNMLGVLP
201: QNIGSLSRLI RLDLHQNKIS SVPPSIGGCS SLVEFYLGIN SLSTLPAEIG DLSRLGTLDL RSNQLKEYPV GACKLKLSYL DLSNNSLTGL HPELGNMTTL
301: RKLVLVGNPL RTLRSSLVNG PTAALLKYLR SRLSNSEETS ASTPTKENVI ASAARMSISS KELSLEGLNL SDVPSEVWES GEITKVNLSK NSIEELPAQL
401: STSVSLQTLI LSRNKIKDWP GAILKSLPNL MCLKLDNNPL NQIPLDGFQV VSGLQILDLS VNAVSFREHP KFCHLPQLRE LYLSRIQLSE VPEDILNLSN
501: LIILDLNQNS LQSIPKGIKN MTSLKHLDIS NNNISSLPPE LGLLEPTLEV LRLDGNPLRS IRRPILERGT KAVLNYLKDR LPDQ

Arabidopsis Description

Leucine-rich repeat (LRR) family protein [Source:UniProtKB/TrEMBL;Acc:F4IYR7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.