CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
extracellular 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_02s0012g01010.t01	Wine grape	cytosol	62.36	60.6
PGSC0003DMT400052889	Potato	cytosol	48.07	58.31
GSMUA_Achr4P19230_001	Banana	cytosol	58.11	57.77
Solyc08g006970.2.1	Tomato	cytosol	55.41	56.5
GSMUA_Achr4P21530_001	Banana	cytosol	56.95	55.56
Os10t0572300-01	Rice	plasma membrane	55.41	52.85
Zm00001d030062_P001	Maize	cytosol	44.21	52.77
TraesCS1D01G194700.1	Wheat	cytosol	54.05	52.53
TraesCS1A01G190500.1	Wheat	cytosol	53.86	52.25
TraesCS1B01G205800.2	Wheat	cytosol	53.86	52.15
Zm00001d047045_P001	Maize	extracellular, mitochondrion, plasma membrane	53.47	51.87
KXG38871	Sorghum	cytosol	53.67	51.67
KRH58211	Soybean	mitochondrion	23.17	50.85
HORVU1Hr1G049900.1	Barley	cytosol, extracellular, mitochondrion, plastid	54.25	49.04
KRH07815	Soybean	cytosol	48.46	45.8
KRH39397	Soybean	nucleus	48.46	45.55
KRH28950	Soybean	cytosol	48.84	44.62
KRH76512	Soybean	nucleus	48.84	44.08
KRH37361	Soybean	cytosol	21.24	30.99
KRH02753	Soybean	cytosol	21.43	30.83
KRH12356	Soybean	cytosol	21.04	30.03
KRH54661	Soybean	cytosol	13.9	27.59
KRH63260	Soybean	cytosol	13.9	27.59
KRH63625	Soybean	nucleus	25.48	25.73
KRH57134	Soybean	plastid	25.29	25.64
KRH74520	Soybean	cytosol	22.59	25.38
KRG98234	Soybean	cytosol	14.09	19.47
KRH30190	Soybean	cytosol, nucleus, peroxisome, plastid	10.81	17.78
KRH22120	Soybean	cytosol	17.95	15.95
KRH27219	Soybean	cytosol	17.18	15.19

Protein Annotations

EntrezGene:100798442	Gene3D:3.80.10.10	MapMan:35.1	EMBL:ACUP02010400	EnsemblPlantsGene:GLYMA_17G154500	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0007154
GO:GO:0007165	GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	UniProt:I1MVE1
InterPro:IPR001611	InterPro:IPR032675	EnsemblPlants:KRH04326	ProteinID:KRH04326	ProteinID:KRH04326.1	InterPro:LRR_dom_sf
InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	PFAM:PF13855	PFscan:PS51450	PANTHER:PTHR44513	PANTHER:PTHR44513:SF3
SMART:SM00364	SMART:SM00369	SUPFAM:SSF52058	UniParc:UPI0001BA7A67	SEG:seg	:

Description

hypothetical protein

Coordinates

chr17:+:13046430..13048869

Molecular Weight (calculated)

58145.1 Da

IEP (calculated)

4.886

GRAVY (calculated)

-0.258

Length

518 amino acids

Sequence
(BLAST)

001: MATRPESEKD PPQPPSRGFL ATVQEITRIY SSLPPRPSIE EVEAATSTVD TLNNEEQIKL NEISMQQQPP HDDVPQDLFS VLQQLKKTMV LFHTHQQRRD
101: ALYLLELENM FQTFGDLIQR ASELVSGDTQ KQKLPTIPEE HAVITEESET LVKEEEGRHK NVFHVVKPSL SAGDGSTEKL SLMKVATVIE SCAGSGATIL
201: ELRGKLVDQM EWLPVSIGKL SDVTEMDLSE NRLMALPTTI VGLKALTKLD LHSNQLINLP HSFGELINLV DLDLHANKLK SLPATFGNLT NLTDLDLSSN
301: GFTDLPETIG NLSSLKRLNV ETNELEELPY TIGNCSSLSV LKLDLNQLKA LPEAIGKLEC LEILTLHYNR VKRLPSTMDN LCNLKELDVS FNELEFVPES
401: LCFATNLKKL NLGKNFADLR ALPASIGNLE MLEELDISDD QIKALPESFR FLSKLRVFRA DETPLDLPPR ELVKLGSQEV VQYMADFVTK RDAKLVPSKK
501: KKKGFWFWFC SIFCPQLK

Best Arabidopsis Sequence Match ( AT2G17440.1 )
(BLAST)

001: MDSKEMVVEE IMRIHRSLPL RPEIDDVETA TSLIQNVEKE DRNRLEAIDK LVKTSSSEVP LELFNVFKEM KKSLVRFQST EQTREATKIL DLESVHVVFD
101: ELIQRASFCI ASPNSTTALP RSVPVPAPVV SSDEIPFKSK EIISRDDTFV KKAKSSFYSD GLLAPSKPQV LDSTLHQAKN VAGNDGEKLS LIKLASLIEV
201: SAKKATQELN LQHRLMDQLE WLPDSLGKLS SLVRLDLSEN CIMVLPATIG GLISLTRLDL HSNRIGQLPE SIGDLLNLVN LNLSGNQLSS LPSSFNRLIH
301: LEELDLSSNS LSILPESIGS LVSLKKLDVE TNNIEEIPHS ISGCSSMEEL RADYNRLKAL PEAVGKLSTL EILTVRYNNI RQLPTTMSSM ANLKELDVSF
401: NELESVPESL CYAKTLVKLN IGNNFANLRS LPGLIGNLEK LEELDMSNNQ IRFLPYSFKT LSNLRVLQTE QNPLEELPRD ITEKGAQAVV QYMNDLVEAR
501: NTKSQRTKPK KSWVNSICFF CKSSTN

Arabidopsis Description

PIRL5Plant intracellular Ras-group-related LRR protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q5G5E0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.