Factsheet for Solyc08g006970.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 1
cytosol 2
extracellular 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400052889	Potato	cytosol	79.13	94.15
VIT_02s0012g01010.t01	Wine grape	cytosol	60.24	57.41
KRH04326	Soybean	cytosol	56.5	55.41
GSMUA_Achr4P19230_001	Banana	cytosol	56.1	54.7
GSMUA_Achr4P21530_001	Banana	cytosol	55.31	52.92
Os10t0572300-01	Rice	plasma membrane	54.33	50.83
TraesCS1D01G194700.1	Wheat	cytosol	52.95	50.47
Zm00001d030062_P001	Maize	cytosol	43.11	50.46
TraesCS1A01G190500.1	Wheat	cytosol	52.76	50.19
TraesCS1B01G205800.2	Wheat	cytosol	52.76	50.09
KXG38871	Sorghum	cytosol	52.36	49.44
Zm00001d047045_P001	Maize	extracellular, mitochondrion, plasma membrane	51.97	49.44
HORVU1Hr1G049900.1	Barley	cytosol, extracellular, mitochondrion, plastid	53.35	47.29
Solyc02g082350.2.1	Tomato	nucleus	47.44	41.77
KRH58211	Soybean	mitochondrion	17.91	38.56
Solyc03g115410.2.1	Tomato	cytosol	14.17	27.8
Solyc12g040320.1.1	Tomato	mitochondrion	13.19	25.67
Solyc12g017480.1.1	Tomato	cytosol	17.72	24.73
Solyc03g112270.2.1	Tomato	cytosol, nucleus, plastid	25.0	24.14
Solyc06g007250.2.1	Tomato	cytosol	14.76	20.0
Solyc10g006930.2.1	Tomato	cytosol	15.55	13.53

Protein Annotations

Gene3D:3.80.10.10	MapMan:35.1	ncoils:Coil	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150
GO:GO:0009416	GO:GO:0009628	GO:GO:0009987	GO:GO:0016020	InterPro:IPR001611	InterPro:IPR032675
UniProt:K4CII4	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	PFAM:PF13855	PFscan:PS51450
PANTHER:PTHR44513	PANTHER:PTHR44513:SF3	SMART:SM00364	SMART:SM00369	SUPFAM:SSF52058	EnsemblPlantsGene:Solyc08g006970.2
EnsemblPlants:Solyc08g006970.2.1	UniParc:UPI000276C249	:	:	:	:

Description

No Description!

Coordinates

chr8:+:1548922..1552302

Molecular Weight (calculated)

57431.9 Da

IEP (calculated)

5.170

GRAVY (calculated)

-0.199

Length

508 amino acids

Sequence
(BLAST)

001: MATPITKPPS PACTKIIEEI TRIYKSLPPR PSILEIEASI SVVKSVETEE KIELDEISKR RVEIEESVPA ELYSVLEKVR KAMVLFQSKE QKKEAVELIE
101: LDKTYQDFDE LIQEATELVC EDTQMGKINS FEDPMVEIGK KDEVLKKGLV TSGELINVSS SGIKHKEKYS LMKVAALIEN AAKTRARVVD LQNKLMDKIE
201: WLPLSLGKLV NVTELNVADN QIMALPTTIG SLNGLTKLDL HSNQIINLPD SFGELINLTD LDLHANRLKS LPASFRNLVN LIDLDLGSNR FTHLPDFVGN
301: LTSLKRLNVE TNQLEELPYT IGFCSSLVEL RLDFNQLKAL PEAMGMLEHL EILTLHINRI KGLPTTMGNL SRLRELDVSF NEVENIPETF CFAVSLEKLN
401: LANNFADLKT LPRSIGNLEN LEELDISNSQ IRTLPDSFRL LSKLKTFRAD ETPLEVPPRQ IIKLGAQVVV EYMAEFVTKN ELQLQRPKRR PFFCPSCLFP
501: KTEGKRRI

Best Arabidopsis Sequence Match ( AT4G35470.1 )
(BLAST)

001: MDLMQMDKRL DSTEQVVEEI MRIHRSLPAR PGIDEVEAAK GLIDNVEKED QACLEAIARQ RKSSEVPGEL FMVLQEMKKG YVQFRSKEQI REALKLLDLE
101: SVHSLFDDFI QRASNCIASP SSNGSVSSRP PLPPATTTAA RSDSQSSLNF SERAPVRPKD MVSRDDSFVT KSKPSSLYSD GFAAPPRRPQ ILDSTLTTGN
201: DGEKLSLIKL ASLIEVSAKK ATQEINLQNK LTEQLEWLPD SLGKLSSLTS LDLSENHIVV LPNTIGGLSS LTKLDLHSNR IGQLPESIGE LLNLVYLNLG
301: SNQLSSLPSA FSRLVRLEEL DLSCNNLPIL PESIGSLVSL KKLDVETNDI EEIPYSIGGC SSLIELRADY NKLKALPEAI GKITTLEILS VRYNNIRQLP
401: TTMSSLASLK ELDVSFNELE SVPESLCFAT TLVKLNIGNN FADMVSLPRS IGNLEMLEEL DISNNQIRVL PDSFKMLTKL RVFRAQENPL HIPPRDIAEK
501: GPQAVVQYMN DLVETRNAKS LMVKPKKSWV QMCFFSKSNK RKQSSMEIV

Arabidopsis Description

PIRL4Plant intracellular Ras-group-related LRR protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SVW8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.