Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- extracellular 1
- mitochondrion 1
- plastid 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
plasma membrane:
18260611
plasma membrane: 27800704 |
msms PMID:
27800704
doi
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Zm00001d030062_P001 | Maize | cytosol | 64.27 | 80.41 |
TraesCS1D01G194700.1 | Wheat | cytosol | 77.53 | 78.99 |
TraesCS1B01G205800.2 | Wheat | cytosol | 77.53 | 78.69 |
TraesCS1A01G190500.1 | Wheat | cytosol | 76.98 | 78.28 |
KXG38871 | Sorghum | cytosol | 77.16 | 77.88 |
Zm00001d047045_P001 | Maize | extracellular, mitochondrion, plasma membrane | 76.24 | 77.53 |
HORVU1Hr1G049900.1 | Barley | cytosol, extracellular, mitochondrion, plastid | 76.98 | 72.95 |
GSMUA_Achr4P19230_001 | Banana | cytosol | 61.33 | 63.92 |
GSMUA_Achr4P21530_001 | Banana | cytosol | 62.06 | 63.47 |
PGSC0003DMT400052889 | Potato | cytosol | 45.3 | 57.61 |
VIT_02s0012g01010.t01 | Wine grape | cytosol | 55.8 | 56.85 |
KRH04326 | Soybean | cytosol | 52.85 | 55.41 |
Solyc08g006970.2.1 | Tomato | cytosol | 50.83 | 54.33 |
Os08t0511700-00 | Rice | plasma membrane | 47.88 | 45.3 |
KRH58211 | Soybean | mitochondrion | 17.86 | 41.1 |
Os03t0212200-01 | Rice | plasma membrane | 8.1 | 30.99 |
Os04t0605300-01 | Rice | nucleus | 19.52 | 30.11 |
Os02t0593600-01 | Rice | plasma membrane | 25.78 | 27.94 |
Os02t0826600-01 | Rice | cytosol | 16.21 | 15.02 |
Protein Annotations
Gene3D:3.80.10.10 | MapMan:35.1 | EntrezGene:4349464 | ProteinID:AAL86486.1 | ProteinID:AAP55113.1 | ProteinID:ABB48010.1 |
EMBL:AK102709 | ProteinID:BAF27299.2 | ProteinID:BAT12165.1 | ncoils:Coil | ProteinID:EAZ17053.1 | GO:GO:0003674 |
GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0007154 |
GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009416 | GO:GO:0009628 | GO:GO:0009987 | GO:GO:0016020 |
InterPro:IPR001611 | InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt | InterPro:Leu-rich_rpt_typical-subtyp | EnsemblPlantsGene:Os10g0572300 |
EnsemblPlants:Os10t0572300-01 | PFAM:PF13855 | PFscan:PS51450 | PANTHER:PTHR44513 | PANTHER:PTHR44513:SF3 | UniProt:Q8S7M7 |
SMART:SM00364 | SMART:SM00369 | SUPFAM:SSF52058 | UniParc:UPI00000AA87A | RefSeq:XP_015614719.1 | SEG:seg |
Description
intracellular Ras-group-related LRR protein 5Leucine-rich repeat, typical subtype containing protein. (Os10t0572300-01);Similar to Protein lap4. (Os10t0572300-02)
Coordinates
chr10:+:22690792..22695147
Molecular Weight (calculated)
59208.1 Da
IEP (calculated)
4.873
GRAVY (calculated)
-0.105
Length
543 amino acids
Sequence
(BLAST)
(BLAST)
001: MASAAEAVEE LTRLYRELPP RPAVEEVEAA EAVLASADAE EAARLDEVAR EEASASASSS AAAPGRADGE LLAVLREARR NAVRLRALQQ RKEAAYVVEL
101: ERRFKVFDDL IQRASRVVSS SSDAAEAGGG TTGDGYVGVG ADSVDLEMEL RKKEAAVAAA AAVAEMERGS KGLAALGLES KPISSLRRDV SAGTDMEKLS
201: LIQVASLIES SAKKGITELS LRGKLVDQIE WLPVSLGKLQ DVTELDLSEN RIMALPSTIG SLRYLTKLDL HSNQLINLPD AFGELSNLID LDLHANQLKS
301: LPSSFGNLTS LANLDLSSNM LKALPDCLGK LANLRRLIVE TNELEELPYT IGSCTSLVEL RLDFNQLKAL PEAIGKLEKL EILTLHYNRI KGLPTTVGSL
401: SRLRELDVSF NEVEVIPENI CFATSLVKLN LSRNFADLRA LPKSIGNLEM LEELDISSNQ IRVLPDSFRC LSRLRVFHAD ETPLEFPPRE VVKLGAQAVV
501: KYMNDLNAAR GTNQKKTDRG SFWTWLFSLF GCCKKNQEVG LPV
101: ERRFKVFDDL IQRASRVVSS SSDAAEAGGG TTGDGYVGVG ADSVDLEMEL RKKEAAVAAA AAVAEMERGS KGLAALGLES KPISSLRRDV SAGTDMEKLS
201: LIQVASLIES SAKKGITELS LRGKLVDQIE WLPVSLGKLQ DVTELDLSEN RIMALPSTIG SLRYLTKLDL HSNQLINLPD AFGELSNLID LDLHANQLKS
301: LPSSFGNLTS LANLDLSSNM LKALPDCLGK LANLRRLIVE TNELEELPYT IGSCTSLVEL RLDFNQLKAL PEAIGKLEKL EILTLHYNRI KGLPTTVGSL
401: SRLRELDVSF NEVEVIPENI CFATSLVKLN LSRNFADLRA LPKSIGNLEM LEELDISSNQ IRVLPDSFRC LSRLRVFHAD ETPLEFPPRE VVKLGAQAVV
501: KYMNDLNAAR GTNQKKTDRG SFWTWLFSLF GCCKKNQEVG LPV
001: MDLMQMDKRL DSTEQVVEEI MRIHRSLPAR PGIDEVEAAK GLIDNVEKED QACLEAIARQ RKSSEVPGEL FMVLQEMKKG YVQFRSKEQI REALKLLDLE
101: SVHSLFDDFI QRASNCIASP SSNGSVSSRP PLPPATTTAA RSDSQSSLNF SERAPVRPKD MVSRDDSFVT KSKPSSLYSD GFAAPPRRPQ ILDSTLTTGN
201: DGEKLSLIKL ASLIEVSAKK ATQEINLQNK LTEQLEWLPD SLGKLSSLTS LDLSENHIVV LPNTIGGLSS LTKLDLHSNR IGQLPESIGE LLNLVYLNLG
301: SNQLSSLPSA FSRLVRLEEL DLSCNNLPIL PESIGSLVSL KKLDVETNDI EEIPYSIGGC SSLIELRADY NKLKALPEAI GKITTLEILS VRYNNIRQLP
401: TTMSSLASLK ELDVSFNELE SVPESLCFAT TLVKLNIGNN FADMVSLPRS IGNLEMLEEL DISNNQIRVL PDSFKMLTKL RVFRAQENPL HIPPRDIAEK
501: GPQAVVQYMN DLVETRNAKS LMVKPKKSWV QMCFFSKSNK RKQSSMEIV
101: SVHSLFDDFI QRASNCIASP SSNGSVSSRP PLPPATTTAA RSDSQSSLNF SERAPVRPKD MVSRDDSFVT KSKPSSLYSD GFAAPPRRPQ ILDSTLTTGN
201: DGEKLSLIKL ASLIEVSAKK ATQEINLQNK LTEQLEWLPD SLGKLSSLTS LDLSENHIVV LPNTIGGLSS LTKLDLHSNR IGQLPESIGE LLNLVYLNLG
301: SNQLSSLPSA FSRLVRLEEL DLSCNNLPIL PESIGSLVSL KKLDVETNDI EEIPYSIGGC SSLIELRADY NKLKALPEAI GKITTLEILS VRYNNIRQLP
401: TTMSSLASLK ELDVSFNELE SVPESLCFAT TLVKLNIGNN FADMVSLPRS IGNLEMLEEL DISNNQIRVL PDSFKMLTKL RVFRAQENPL HIPPRDIAEK
501: GPQAVVQYMN DLVETRNAKS LMVKPKKSWV QMCFFSKSNK RKQSSMEIV
Arabidopsis Description
PIRL4Plant intracellular Ras-group-related LRR protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SVW8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.