Factsheet for GSMUA_Achr4P19230_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P21530_001	Banana	cytosol	82.53	80.98
Os10t0572300-01	Rice	plasma membrane	63.92	61.33
TraesCS1D01G194700.1	Wheat	cytosol	62.19	60.79
VIT_02s0012g01010.t01	Wine grape	cytosol	61.8	60.41
KXG38871	Sorghum	cytosol	62.38	60.41
Zm00001d030062_P001	Maize	cytosol	50.29	60.37
TraesCS1B01G205800.2	Wheat	cytosol	61.8	60.19
TraesCS1A01G190500.1	Wheat	cytosol	61.61	60.11
Zm00001d047045_P001	Maize	extracellular, mitochondrion, plasma membrane	61.23	59.74
KRH04326	Soybean	cytosol	57.77	58.11
PGSC0003DMT400052889	Potato	cytosol	47.6	58.08
Solyc08g006970.2.1	Tomato	cytosol	54.7	56.1
HORVU1Hr1G049900.1	Barley	cytosol, extracellular, mitochondrion, plastid	61.42	55.85
GSMUA_Achr8P25490_001	Banana	nucleus	53.93	50.81
GSMUA_Achr5P23850_001	Banana	cytosol	53.17	50.27
KRH58211	Soybean	mitochondrion	19.0	41.95
GSMUA_Achr4P03280_001	Banana	plastid	8.64	31.47
GSMUA_Achr1P23570_001	Banana	nucleus	19.77	30.03
GSMUA_AchrUn_...	Banana	nucleus	19.39	29.71
GSMUA_Achr1P13500_001	Banana	plastid	26.3	28.02
GSMUA_Achr8P28520_001	Banana	cytosol, nucleus, plastid	26.1	27.15
GSMUA_Achr6P03430_001	Banana	nucleus	22.07	24.36
GSMUA_Achr4P03290_001	Banana	cytosol	6.33	24.09
GSMUA_Achr5P07410_001	Banana	cytosol	12.86	17.63
GSMUA_Achr4P04360_001	Banana	cytosol	17.27	15.38

Protein Annotations

Gene3D:3.80.10.10	MapMan:35.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:GSMUA_Achr4G19230_001
EnsemblPlants:GSMUA_Achr4P19230_001	EnsemblPlants:GSMUA_Achr4T19230_001	InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt
InterPro:Leu-rich_rpt_typical-subtyp	UniProt:M0SQ86	PFAM:PF13855	PRINTS:PR00019	PFscan:PS51450	PANTHER:PTHR44513
PANTHER:PTHR44513:SF3	SMART:SM00364	SMART:SM00365	SMART:SM00369	SUPFAM:SSF52058	UniParc:UPI0002968B33
SEG:seg	:	:	:	:	:

Description

Putative Leucine-rich repeat-containing protein 1 [Source:GMGC_GENE;Acc:GSMUA_Achr4G19230_001]

Coordinates

chr4:-:20276653..20278927

Molecular Weight (calculated)

57875.6 Da

IEP (calculated)

4.607

GRAVY (calculated)

-0.178

Length

521 amino acids

Sequence
(BLAST)

001: MGTPSKPRPP GVVEAVEEIM RIYRSLPPRP SIEEVEAAMA VIRTADSEEE ARIAEIGKIQ KPPDVPEELF LVLQEVRNNL ILLQGQEQRR EAMTVVELDK
101: RFQVFDELIQ RASELVSSEE GGGVCEEKEF KADFNVEVPR IGRSLSLVKE ETDEKGEQDV SHVLVHSSSK SQVPSANGDT KKLSLIQVAS LIETSAKKGI
201: GILDLQGKLM DQIEWLPNSL GKLQDVVELN LSENRIMALP TSIGSLRSLK KLDIHSNQLI NLPDSFGELS NLVDLDLHAN RLKSLPSTFG NLTSLANLDL
301: SSNQLSVLPE TIGNLTNLRS LNVETNELEE LPYTIGSCTA LVELRLDFNH LKALPEAVGK LECLEILILH YNRVKSLPTT MASLSKLKEL DVSFNELESI
401: PESLCFATSL VKLDVGRNFA DLTALPRSIG NLEMLEELDI SSNQIRTLPD SFRLLSKLRV FNADETPLEV PPRHVVKLGA QAVVQYMADL VSGRTANVEQ
501: ARRPRGFWFW LCSLCTTSEE E

Best Arabidopsis Sequence Match ( AT4G35470.1 )
(BLAST)

001: MDLMQMDKRL DSTEQVVEEI MRIHRSLPAR PGIDEVEAAK GLIDNVEKED QACLEAIARQ RKSSEVPGEL FMVLQEMKKG YVQFRSKEQI REALKLLDLE
101: SVHSLFDDFI QRASNCIASP SSNGSVSSRP PLPPATTTAA RSDSQSSLNF SERAPVRPKD MVSRDDSFVT KSKPSSLYSD GFAAPPRRPQ ILDSTLTTGN
201: DGEKLSLIKL ASLIEVSAKK ATQEINLQNK LTEQLEWLPD SLGKLSSLTS LDLSENHIVV LPNTIGGLSS LTKLDLHSNR IGQLPESIGE LLNLVYLNLG
301: SNQLSSLPSA FSRLVRLEEL DLSCNNLPIL PESIGSLVSL KKLDVETNDI EEIPYSIGGC SSLIELRADY NKLKALPEAI GKITTLEILS VRYNNIRQLP
401: TTMSSLASLK ELDVSFNELE SVPESLCFAT TLVKLNIGNN FADMVSLPRS IGNLEMLEEL DISNNQIRVL PDSFKMLTKL RVFRAQENPL HIPPRDIAEK
501: GPQAVVQYMN DLVETRNAKS LMVKPKKSWV QMCFFSKSNK RKQSSMEIV

Arabidopsis Description

PIRL4Plant intracellular Ras-group-related LRR protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SVW8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.