Factsheet for Zm00001d047045_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plasma membrane, extracellular

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, mitochondrion, plasma membrane
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

extracellular: 20408568
plasma membrane: 23353019
mitochondrion: 27297264

msms PMID: 23353019 doi

D Hopff, S Wienkoop, S Lüthje

University of Hamburg, Biocenter Klein Flottbek and Botanical Garden, Plant Physiology, Ohnhorststraße 18, D-22609 Hamburg, Germany.

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG38871	Sorghum	cytosol	91.95	91.26
Zm00001d030062_P001	Maize	cytosol	73.97	91.01
TraesCS1D01G194700.1	Wheat	cytosol	77.15	77.3
TraesCS1B01G205800.2	Wheat	cytosol	77.34	77.2
TraesCS1A01G190500.1	Wheat	cytosol	76.78	76.78
Os10t0572300-01	Rice	plasma membrane	77.53	76.24
HORVU1Hr1G049900.1	Barley	cytosol, extracellular, mitochondrion, plastid	77.34	72.08
GSMUA_Achr4P19230_001	Banana	cytosol	59.74	61.23
GSMUA_Achr4P21530_001	Banana	cytosol	59.18	59.51
PGSC0003DMT400052889	Potato	cytosol	44.38	55.5
VIT_02s0012g01010.t01	Wine grape	cytosol	54.12	54.22
KRH04326	Soybean	cytosol	51.87	53.47
Solyc08g006970.2.1	Tomato	cytosol	49.44	51.97
Zm00001d031470_P001	Maize	plasma membrane	47.57	44.02
KRH58211	Soybean	mitochondrion	17.6	39.83
Zm00001d002399_P001	Maize	nucleus	15.36	32.67
Zm00001d002402_P001	Maize	cytosol, nucleus, plastid	19.85	29.2
Zm00001d017071_P002	Maize	plastid	25.28	25.52
Zm00001d025681_P001	Maize	plasma membrane	23.41	24.9
Zm00001d028191_P002	Maize	cytosol	12.55	20.18
Zm00001d018525_P004	Maize	cytosol	16.29	13.94

Protein Annotations

Gene3D:3.80.10.10	MapMan:35.1	UniProt:A0A1D6P6J2	ProteinID:AQL05473.1	ncoils:Coil	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt
InterPro:Leu-rich_rpt_typical-subtyp	PFAM:PF00560	PFAM:PF13855	PFscan:PS51450	PANTHER:PTHR44513	PANTHER:PTHR44513:SF3
SMART:SM00364	SMART:SM00369	SUPFAM:SSF52058	UniParc:UPI000843FB82	EnsemblPlantsGene:Zm00001d047045	EnsemblPlants:Zm00001d047045_P001
EnsemblPlants:Zm00001d047045_T001	SEG:seg	:	:	:	:

Description

Plant intracellular Ras-group-related LRR protein 4

Coordinates

chr9:-:116591439..116594352

Molecular Weight (calculated)

58314.0 Da

IEP (calculated)

5.162

GRAVY (calculated)

-0.184

Length

534 amino acids

Sequence
(BLAST)

001: MAAAGPTTSP ATAGAVEELT RLYRELPPRP AVEEVEAAAA VLASAAAEEE ARLAEIDREE ALARGGAPPE LLDVLWEARR SSVRLRALQQ RKEAAHVLEL
101: ERRFRLFDDL IQRASRLLSP GGGAGARSGT GGAAVDHDEV VEVDATRNTE LDAAPAEIGR GSKGGLGLEP KSVSSLRRAA SAGTDTEKLG LIQVASLIES
201: SAKKGTTELN LRGKLVDQVE WLPVSLGKLQ DVTELDLSEN RIMALPSTIG SLRYLTKLDL HSNQLINLPD TFGELSSLID LDLRANQLKS LPTSFGNLTS
301: LANLDLSSNL LKVLPDCLGK LKNLRRLIAE TNELEELPYT IGSCTSLVEL RLDFNQLKAL PEAIGKLENL EILTLHYNRI KGLPTTIGHL TRLRELDVSF
401: NEVETIPENI CFAASLVKLN VSRNFADLRA LPKSIGELEM LEELDISSNQ IRVLPDSFGH LSKLRVFHAD ETPLEVPPKE VVKLGAQELV NYMKNMVAAR
501: EVSQNQTDKR SFWTWLRSLF GCYKKNQGLG PVPA

Best Arabidopsis Sequence Match ( AT4G35470.1 )
(BLAST)

001: MDLMQMDKRL DSTEQVVEEI MRIHRSLPAR PGIDEVEAAK GLIDNVEKED QACLEAIARQ RKSSEVPGEL FMVLQEMKKG YVQFRSKEQI REALKLLDLE
101: SVHSLFDDFI QRASNCIASP SSNGSVSSRP PLPPATTTAA RSDSQSSLNF SERAPVRPKD MVSRDDSFVT KSKPSSLYSD GFAAPPRRPQ ILDSTLTTGN
201: DGEKLSLIKL ASLIEVSAKK ATQEINLQNK LTEQLEWLPD SLGKLSSLTS LDLSENHIVV LPNTIGGLSS LTKLDLHSNR IGQLPESIGE LLNLVYLNLG
301: SNQLSSLPSA FSRLVRLEEL DLSCNNLPIL PESIGSLVSL KKLDVETNDI EEIPYSIGGC SSLIELRADY NKLKALPEAI GKITTLEILS VRYNNIRQLP
401: TTMSSLASLK ELDVSFNELE SVPESLCFAT TLVKLNIGNN FADMVSLPRS IGNLEMLEEL DISNNQIRVL PDSFKMLTKL RVFRAQENPL HIPPRDIAEK
501: GPQAVVQYMN DLVETRNAKS LMVKPKKSWV QMCFFSKSNK RKQSSMEIV

Arabidopsis Description

PIRL4Plant intracellular Ras-group-related LRR protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SVW8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.