Factsheet for Zm00001d028191_P002

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 2
cytosol 2
plastid 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER95291	Sorghum	cytosol	73.8	93.51
HORVU4Hr1G068710.2	Barley	cytosol, mitochondrion, nucleus, plastid	68.07	86.26
TraesCS4D01G249500.1	Wheat	cytosol, mitochondrion	68.07	86.26
Os03t0212200-01	Rice	plasma membrane	36.75	85.92
TraesCS4B01G249200.1	Wheat	cytosol, nucleus, plastid	67.77	85.88
GSMUA_Achr4P03290_001	Banana	cytosol	29.52	71.53
TraesCS4A01G055400.1	Wheat	nucleus	68.07	66.67
VIT_17s0000g06940.t01	Wine grape	cytosol	51.51	65.52
KRH54661	Soybean	cytosol	49.1	62.45
KRH63260	Soybean	cytosol	49.1	62.45
GSMUA_Achr4P03280_001	Banana	plastid	26.81	62.24
Solyc03g115410.2.1	Tomato	cytosol	48.49	62.16
Solyc12g040320.1.1	Tomato	mitochondrion	47.89	60.92
CDX81078	Canola	mitochondrion	47.59	60.31
AT5G07910.1	Thale cress	cytosol	47.59	60.31
CDY14024	Canola	mitochondrion	47.29	59.7
Bra028680.1-P	Field mustard	cytosol	47.29	59.47
CDY40770	Canola	cytosol	47.29	59.47
CDX78316	Canola	cytosol, mitochondrion, nucleus	46.39	58.78
Bra005960.1-P	Field mustard	cytosol, mitochondrion, nucleus	46.39	58.78
PGSC0003DMT400063105	Potato	cytosol	46.08	58.4
PGSC0003DMT400013776	Potato	cytosol	38.86	56.83
Zm00001d002399_P001	Maize	nucleus	13.25	17.53
Zm00001d002402_P001	Maize	cytosol, nucleus, plastid	18.98	17.36
Zm00001d030062_P001	Maize	cytosol	19.28	14.75
Zm00001d017071_P002	Maize	plastid	22.29	13.99
Zm00001d025681_P001	Maize	plasma membrane	20.78	13.74
Zm00001d031470_P001	Maize	plasma membrane	23.49	13.52
Zm00001d047045_P001	Maize	extracellular, mitochondrion, plasma membrane	20.18	12.55
Zm00001d018525_P004	Maize	cytosol	20.48	10.9

Protein Annotations

EntrezGene:100281951	Gene3D:3.80.10.10	MapMan:35.1	UniProt:A0A1D6JSQ3	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0016020	InterPro:IPR001611
InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	ProteinID:ONL94936.1	PFscan:PS51450
PANTHER:PTHR45289	PANTHER:PTHR45289:SF2	SMART:SM00364	SMART:SM00369	SUPFAM:SSF52058	UniParc:UPI000844D998
EnsemblPlantsGene:Zm00001d028191	EnsemblPlants:Zm00001d028191_P002	EnsemblPlants:Zm00001d028191_T002	SEG:seg	:	:

Description

LAP4 protein

Coordinates

chr1:+:25791635..25805381

Molecular Weight (calculated)

36153.4 Da

IEP (calculated)

6.977

GRAVY (calculated)

-0.218

Length

332 amino acids

Sequence
(BLAST)

001: MGCCSSRSSD SPASRVTRWR STGIVALRDA RLKEVPNEVL QVGNSLRTLD LTNNKLVEIP QEIGTLANMQ RLVLAGNLIE IIPANIGYLQ NLKILTLDRN
101: RISILPEELG SLSNLQQLSV PQNFLLCLPK SIGDLRNSSS SGPFLLKNGR SSLDTGACCS SLLLSILSGL DHSRDLLQKR SFVVGHRHGG DGRMSVLNVS
201: DNKLKELPES IGGCSSLEEF QANASPTSGT DLEAKYSGNA IEDVPASICN LVCLKSLSLN GNKIRQLPQN LLKDCTALQS LSLHDNPITM DQFQQMDGFG
301: EFEARRRKKF DKQIDSGVMM GSTALDEGVD FH

Best Arabidopsis Sequence Match ( AT5G07910.1 )
(BLAST)

001: MGCCASNTAG GSKANRISRW RSTGIVGLRD SKLKTFPDEV IEMERAVRTL DLTHNKIADV PGEISKLINM QRLLIADNLV ERLPGNLGKL QSLKVLMLDG
101: NRISCLPDEL GQLVRLEQLS ISRNMLIYLP DTIGSLRNLL LLNVSNNRLK SLPESVGSCA SLEEVQANDN VVEELPASLC NLIQLKSLSL DNNQVNQIPD
201: GLLIHCKSLQ NLSLHNNPIS MDQFQLMEGY QDFEERRKKK FDKQIDSNVM MGSKALDVGV DK

Arabidopsis Description

Leucine-rich repeat (LRR) family protein [Source:UniProtKB/TrEMBL;Acc:Q8RWI2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.