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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • mitochondrion 3
  • cytosol 2
  • extracellular 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, extracellular, mitochondrion, nucleus, plastid
BaCelLo:nucleus
iPSORT:mitochondrion
MultiLoc:cytosol
Plant-mPloc:extracellular
PProwler:mitochondrion
TargetP:plastid
WoLF PSORT:mitochondrion
YLoc:cytosol
plasma membrane: 27800704
plasma membrane: 28056797
extracellular: 28232208
msms PMID: 27800704 doi
J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
msms PMID: 28056797 doi
N Yang, T Wang
Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.
msms PMID: 28232208 doi
Y Wang, R Gupta, W Song, HH Huh, SE Lee, J Wu, GK Agrawal, R Rakwal, KY Kang, SR Park, ST Kim
Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang 627-707, South Korea., Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang 627-707, South Korea. Electronic address: stkim71@pusan.ac.kr., Department of Plant Microbe Interactions, Max Planck Institute for Plant Breeding Research, Carl-von-Linneweg 10, Cologne 50829, Germany., Division of Applied Life Science (BK21 Program), Gyeongsang National University, Jinju, South Korea., National Academy of Agricultural Science, Rural Development Administration, Suwon 441-707, South Korea. Electronic address: srpark@korea.kr., Plant Proteomics Group, Max Planck Institute for Plant Breeding Research, Carl-von-Linneweg 10, Cologne 50829, Germany., Research Laboratory for Biotechnology and Biochemistry (RLABB), GPO 13265, Kathmandu 44600, Nepal; GRADE (Global Research Arch for Developing Education) Academy, Pvt. Ltd, Adarsh Nagar-13, Birgunj 44300, Nepal., Research Laboratory for Biotechnology and Biochemistry (RLABB), GPO 13265, Kathmandu 44600, Nepal; GRADE (Global Research Arch for Developing Education) Academy, Pvt. Ltd, Adarsh Nagar-13, Birgunj 44300, Nepal; Faculty of Health and Sport Sciences, Tsukuba International Academy for Sport Studies (TIAS), University of Tsukuba, 1-1-1 Tennodai, Tsukuba, 305-8574, Ibaraki, Japan.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr4P03280_001 Banana plastid 59.15 58.74
EER95291 Sorghum cytosol 88.03 47.71
HORVU4Hr1G068710.2 Barley cytosol, mitochondrion, nucleus, plastid 86.62 46.95
TraesCS4B01G249200.1 Wheat cytosol, nucleus, plastid 86.62 46.95
TraesCS4D01G249500.1 Wheat cytosol, mitochondrion 85.92 46.56
Zm00001d028191_P002 Maize cytosol 85.92 36.75
TraesCS4A01G055400.1 Wheat nucleus 87.32 36.58
AT5G07910.1 Thale cress cytosol 57.04 30.92
CDY14024 Canola mitochondrion 57.04 30.8
Bra028680.1-P Field mustard cytosol 57.04 30.68
CDY40770 Canola cytosol 57.04 30.68
VIT_17s0000g06940.t01 Wine grape cytosol 56.34 30.65
Solyc12g040320.1.1 Tomato mitochondrion 55.63 30.27
Bra005960.1-P Field mustard cytosol, mitochondrion, nucleus 55.63 30.15
CDX78316 Canola cytosol, mitochondrion, nucleus 55.63 30.15
KRH63260 Soybean cytosol 54.93 29.89
KRH54661 Soybean cytosol 54.93 29.89
CDX81078 Canola mitochondrion 54.23 29.39
Solyc03g115410.2.1 Tomato cytosol 53.52 29.34
PGSC0003DMT400063105 Potato cytosol 49.3 26.72
PGSC0003DMT400013776 Potato cytosol 33.8 21.15
Os10t0572300-01 Rice plasma membrane 30.99 8.1
Os08t0511700-00 Rice plasma membrane 28.87 7.14
Os02t0593600-01 Rice plasma membrane 22.54 6.39
GSMUA_Achr4P03290_001 Banana cytosol 5.63 5.84
Os04t0605300-01 Rice nucleus 14.08 5.68
Os02t0826600-01 Rice cytosol 22.54 5.46
Protein Annotations
EnsemblPlants:Os03t0212200-01EnsemblPlantsGene:Os03g0212200Gene3D:3.80.10.10GO:GO:0003674GO:GO:0005488GO:GO:0005515
InterPro:IPR001611InterPro:IPR032675InterPro:LRR_dom_sfInterPro:Leu-rich_rptInterPro:Leu-rich_rpt_typical-subtypPANTHER:PTHR45289
PANTHER:PTHR45289:SF2PFAM:PF13855PFscan:PS51450ProteinID:BAS82926.1SEG:segSMART:SM00369
SUPFAM:SSF52058UniParc:UPI000224CF1AMapMan:35.1:::
Description
intracellular Ras-group-related LRR protein 7Leucine-rich repeat domain containing protein. (Os03t0212200-01)
Coordinates
chr3:+:5853962..5857465
Molecular Weight (calculated)
15529.9 Da
IEP (calculated)
10.651
GRAVY (calculated)
-0.121
Length
142 amino acids
Sequence
(BLAST)
001: MGCCSSRSAD SPASRVTRWR STGIVALRDA RLKVVPNEVL QVGNSLRILD LTNNKIAEIP QEVGTLVNMQ RLVLAGNLVE SIPANIGYLR NLKILTLDRN
101: KISVLPEELG SLSNLQQLSI SQNSLSRLPK SVGDLRNNQI NS
Best Arabidopsis Sequence Match ( AT5G07910.1 )
(BLAST)
001: MGCCASNTAG GSKANRISRW RSTGIVGLRD SKLKTFPDEV IEMERAVRTL DLTHNKIADV PGEISKLINM QRLLIADNLV ERLPGNLGKL QSLKVLMLDG
101: NRISCLPDEL GQLVRLEQLS ISRNMLIYLP DTIGSLRNLL LLNVSNNRLK SLPESVGSCA SLEEVQANDN VVEELPASLC NLIQLKSLSL DNNQVNQIPD
201: GLLIHCKSLQ NLSLHNNPIS MDQFQLMEGY QDFEERRKKK FDKQIDSNVM MGSKALDVGV DK
Arabidopsis Description
Leucine-rich repeat (LRR) family protein [Source:UniProtKB/TrEMBL;Acc:Q8RWI2]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.