Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 3
- cytosol 2
- extracellular 1
- plastid 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
plasma membrane:
27800704
plasma membrane: 28056797 extracellular: 28232208 |
msms PMID:
27800704
doi
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
msms PMID:
28056797
doi
Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.
msms PMID:
28232208
doi
Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang 627-707, South Korea., Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang 627-707, South Korea. Electronic address: stkim71@pusan.ac.kr., Department of Plant Microbe Interactions, Max Planck Institute for Plant Breeding Research, Carl-von-Linneweg 10, Cologne 50829, Germany., Division of Applied Life Science (BK21 Program), Gyeongsang National University, Jinju, South Korea., National Academy of Agricultural Science, Rural Development Administration, Suwon 441-707, South Korea. Electronic address: srpark@korea.kr., Plant Proteomics Group, Max Planck Institute for Plant Breeding Research, Carl-von-Linneweg 10, Cologne 50829, Germany., Research Laboratory for Biotechnology and Biochemistry (RLABB), GPO 13265, Kathmandu 44600, Nepal; GRADE (Global Research Arch for Developing Education) Academy, Pvt. Ltd, Adarsh Nagar-13, Birgunj 44300, Nepal., Research Laboratory for Biotechnology and Biochemistry (RLABB), GPO 13265, Kathmandu 44600, Nepal; GRADE (Global Research Arch for Developing Education) Academy, Pvt. Ltd, Adarsh Nagar-13, Birgunj 44300, Nepal; Faculty of Health and Sport Sciences, Tsukuba International Academy for Sport Studies (TIAS), University of Tsukuba, 1-1-1 Tennodai, Tsukuba, 305-8574, Ibaraki, Japan.
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
GSMUA_Achr4P03280_001 | Banana | plastid | 59.15 | 58.74 |
EER95291 | Sorghum | cytosol | 88.03 | 47.71 |
HORVU4Hr1G068710.2 | Barley | cytosol, mitochondrion, nucleus, plastid | 86.62 | 46.95 |
TraesCS4B01G249200.1 | Wheat | cytosol, nucleus, plastid | 86.62 | 46.95 |
TraesCS4D01G249500.1 | Wheat | cytosol, mitochondrion | 85.92 | 46.56 |
Zm00001d028191_P002 | Maize | cytosol | 85.92 | 36.75 |
TraesCS4A01G055400.1 | Wheat | nucleus | 87.32 | 36.58 |
AT5G07910.1 | Thale cress | cytosol | 57.04 | 30.92 |
CDY14024 | Canola | mitochondrion | 57.04 | 30.8 |
Bra028680.1-P | Field mustard | cytosol | 57.04 | 30.68 |
CDY40770 | Canola | cytosol | 57.04 | 30.68 |
VIT_17s0000g06940.t01 | Wine grape | cytosol | 56.34 | 30.65 |
Solyc12g040320.1.1 | Tomato | mitochondrion | 55.63 | 30.27 |
Bra005960.1-P | Field mustard | cytosol, mitochondrion, nucleus | 55.63 | 30.15 |
CDX78316 | Canola | cytosol, mitochondrion, nucleus | 55.63 | 30.15 |
KRH63260 | Soybean | cytosol | 54.93 | 29.89 |
KRH54661 | Soybean | cytosol | 54.93 | 29.89 |
CDX81078 | Canola | mitochondrion | 54.23 | 29.39 |
Solyc03g115410.2.1 | Tomato | cytosol | 53.52 | 29.34 |
PGSC0003DMT400063105 | Potato | cytosol | 49.3 | 26.72 |
PGSC0003DMT400013776 | Potato | cytosol | 33.8 | 21.15 |
Os10t0572300-01 | Rice | plasma membrane | 30.99 | 8.1 |
Os08t0511700-00 | Rice | plasma membrane | 28.87 | 7.14 |
Os02t0593600-01 | Rice | plasma membrane | 22.54 | 6.39 |
GSMUA_Achr4P03290_001 | Banana | cytosol | 5.63 | 5.84 |
Os04t0605300-01 | Rice | nucleus | 14.08 | 5.68 |
Os02t0826600-01 | Rice | cytosol | 22.54 | 5.46 |
Protein Annotations
EnsemblPlants:Os03t0212200-01 | EnsemblPlantsGene:Os03g0212200 | Gene3D:3.80.10.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
InterPro:IPR001611 | InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt | InterPro:Leu-rich_rpt_typical-subtyp | PANTHER:PTHR45289 |
PANTHER:PTHR45289:SF2 | PFAM:PF13855 | PFscan:PS51450 | ProteinID:BAS82926.1 | SEG:seg | SMART:SM00369 |
SUPFAM:SSF52058 | UniParc:UPI000224CF1A | MapMan:35.1 | : | : | : |
Description
intracellular Ras-group-related LRR protein 7Leucine-rich repeat domain containing protein. (Os03t0212200-01)
Coordinates
chr3:+:5853962..5857465
Molecular Weight (calculated)
15529.9 Da
IEP (calculated)
10.651
GRAVY (calculated)
-0.121
Length
142 amino acids
Sequence
(BLAST)
(BLAST)
001: MGCCSSRSAD SPASRVTRWR STGIVALRDA RLKVVPNEVL QVGNSLRILD LTNNKIAEIP QEVGTLVNMQ RLVLAGNLVE SIPANIGYLR NLKILTLDRN
101: KISVLPEELG SLSNLQQLSI SQNSLSRLPK SVGDLRNNQI NS
101: KISVLPEELG SLSNLQQLSI SQNSLSRLPK SVGDLRNNQI NS
001: MGCCASNTAG GSKANRISRW RSTGIVGLRD SKLKTFPDEV IEMERAVRTL DLTHNKIADV PGEISKLINM QRLLIADNLV ERLPGNLGKL QSLKVLMLDG
101: NRISCLPDEL GQLVRLEQLS ISRNMLIYLP DTIGSLRNLL LLNVSNNRLK SLPESVGSCA SLEEVQANDN VVEELPASLC NLIQLKSLSL DNNQVNQIPD
201: GLLIHCKSLQ NLSLHNNPIS MDQFQLMEGY QDFEERRKKK FDKQIDSNVM MGSKALDVGV DK
101: NRISCLPDEL GQLVRLEQLS ISRNMLIYLP DTIGSLRNLL LLNVSNNRLK SLPESVGSCA SLEEVQANDN VVEELPASLC NLIQLKSLSL DNNQVNQIPD
201: GLLIHCKSLQ NLSLHNNPIS MDQFQLMEGY QDFEERRKKK FDKQIDSNVM MGSKALDVGV DK
Arabidopsis Description
Leucine-rich repeat (LRR) family protein [Source:UniProtKB/TrEMBL;Acc:Q8RWI2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.