CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 3
cytosol 2
extracellular 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH63260	Soybean	cytosol	98.08	98.08
VIT_17s0000g06940.t01	Wine grape	cytosol	83.52	83.52
Solyc03g115410.2.1	Tomato	cytosol	77.01	77.61
Bra028680.1-P	Field mustard	cytosol	77.39	76.52
CDY40770	Canola	cytosol	77.39	76.52
CDY14024	Canola	mitochondrion	77.01	76.43
Solyc12g040320.1.1	Tomato	mitochondrion	75.86	75.86
PGSC0003DMT400063105	Potato	cytosol	74.71	74.43
CDX81078	Canola	mitochondrion	74.71	74.43
AT5G07910.1	Thale cress	cytosol	74.71	74.43
Bra005960.1-P	Field mustard	cytosol, mitochondrion, nucleus	74.33	74.05
CDX78316	Canola	cytosol, mitochondrion, nucleus	74.33	74.05
GSMUA_Achr4P03290_001	Banana	cytosol	37.55	71.53
PGSC0003DMT400013776	Potato	cytosol	60.15	69.16
TraesCS4B01G249200.1	Wheat	cytosol, nucleus, plastid	63.22	62.98
TraesCS4D01G249500.1	Wheat	cytosol, mitochondrion	62.84	62.6
EER95291	Sorghum	cytosol	62.84	62.6
HORVU4Hr1G068710.2	Barley	cytosol, mitochondrion, nucleus, plastid	62.45	62.21
GSMUA_Achr4P03280_001	Banana	plastid	33.33	60.84
Os03t0212200-01	Rice	plasma membrane	29.89	54.93
Zm00001d028191_P002	Maize	cytosol	62.45	49.1
TraesCS4A01G055400.1	Wheat	nucleus	63.6	48.97
KRH74520	Soybean	cytosol	28.35	16.05
KRH28950	Soybean	cytosol	34.48	15.87
KRH76512	Soybean	nucleus	33.72	15.33
KRH07815	Soybean	cytosol	31.8	15.15
KRH39397	Soybean	nucleus	31.8	15.06
KRH37361	Soybean	cytosol	20.31	14.93
KRH63625	Soybean	nucleus	29.12	14.81
KRH12356	Soybean	cytosol	20.31	14.6
KRH02753	Soybean	cytosol	19.92	14.44
KRH57134	Soybean	plastid	27.59	14.09
KRH04326	Soybean	cytosol	27.59	13.9
KRH22120	Soybean	cytosol	28.35	12.69
KRG98234	Soybean	cytosol	18.01	12.53
KRH27219	Soybean	cytosol	27.97	12.46
KRH30190	Soybean	cytosol, nucleus, peroxisome, plastid	14.56	12.06
KRH58211	Soybean	mitochondrion	10.73	11.86

Protein Annotations

EntrezGene:100807758	Gene3D:3.80.10.10	MapMan:35.1	EMBL:ACUP02003560	EnsemblPlantsGene:GLYMA_06G201600	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	UniProt:I1KCZ0	InterPro:IPR001611	InterPro:IPR032675	EnsemblPlants:KRH54661
ProteinID:KRH54661	ProteinID:KRH54661.1	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	PFAM:PF13855
PFscan:PS51450	PANTHER:PTHR45289	PANTHER:PTHR45289:SF1	SMART:SM00364	SMART:SM00369	SUPFAM:SSF52058
UniParc:UPI0001BA89D8	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr6:-:18552625..18560234

Molecular Weight (calculated)

29068.3 Da

IEP (calculated)

7.348

GRAVY (calculated)

-0.163

Length

261 amino acids

Sequence
(BLAST)

001: MGCFASKNAD TKASRAARWR STGIVALRDS KLKTFPDEIL ELDRSVRTLD LTHNRIVDIP VEISKLINVQ RLILAENLIE RLPVNLGKLQ SLKLMNLDGN
101: RITSLPDELG QLVRLERISI SGNLLTSLPA TIGSLRNLVL LNVSNNKLQS LPESVGSCFS LEELQANDNL IEDLPSSVCN LSHLKSLCLD NNNVKQIPLN
201: LLKDCKALQN ISLHANPISM DQFQLMEGFQ EFEARRKKKF DKQIDSNVMI GSKGLDEGVD L

Best Arabidopsis Sequence Match ( AT5G07910.1 )
(BLAST)

001: MGCCASNTAG GSKANRISRW RSTGIVGLRD SKLKTFPDEV IEMERAVRTL DLTHNKIADV PGEISKLINM QRLLIADNLV ERLPGNLGKL QSLKVLMLDG
101: NRISCLPDEL GQLVRLEQLS ISRNMLIYLP DTIGSLRNLL LLNVSNNRLK SLPESVGSCA SLEEVQANDN VVEELPASLC NLIQLKSLSL DNNQVNQIPD
201: GLLIHCKSLQ NLSLHNNPIS MDQFQLMEGY QDFEERRKKK FDKQIDSNVM MGSKALDVGV DK

Arabidopsis Description

Leucine-rich repeat (LRR) family protein [Source:UniProtKB/TrEMBL;Acc:Q8RWI2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.