CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
extracellular 1
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH27219	Soybean	cytosol	95.37	94.88
VIT_19s0014g03000.t01	Wine grape	cytosol, mitochondrion	76.33	76.2
Bra027245.1-P	Field mustard	nucleus	71.18	70.94
CDX97667	Canola	nucleus	70.84	70.6
CDY56828	Canola	nucleus	70.5	70.26
Solyc10g006930.2.1	Tomato	cytosol	70.33	70.21
AT3G15410.2	Thale cress	cytosol, mitochondrion, nucleus	71.01	70.17
GSMUA_Achr4P04360_001	Banana	cytosol	67.58	67.35
HORVU6Hr1G093360.11	Barley	nucleus	41.85	65.77
TraesCS6D01G393300.1	Wheat	cytosol	65.35	65.02
TraesCS6B01G456300.1	Wheat	cytosol	65.18	64.96
EES07794	Sorghum	cytosol	64.67	64.33
Os02t0826600-01	Rice	cytosol	64.49	64.16
Zm00001d018525_P004	Maize	cytosol	64.49	60.26
TraesCS6A01G410200.1	Wheat	cytosol, plasma membrane, plastid	65.18	58.64
KRH54661	Soybean	cytosol	12.69	28.35
KRH63260	Soybean	cytosol	12.52	27.97
KRH37361	Soybean	cytosol	13.72	22.54
KRH58211	Soybean	mitochondrion	8.92	22.03
KRH02753	Soybean	cytosol	13.55	21.94
KRH12356	Soybean	cytosol	13.55	21.76
KRH74520	Soybean	cytosol	17.15	21.69
KRH63625	Soybean	nucleus	17.67	20.08
KRH57134	Soybean	plastid	16.81	19.18
KRH39397	Soybean	nucleus	17.5	18.51
KRH07815	Soybean	cytosol	17.15	18.25
KRH04326	Soybean	cytosol	15.95	17.95
KRH28950	Soybean	cytosol	17.15	17.64
KRG98234	Soybean	cytosol	11.32	17.6
KRH76512	Soybean	nucleus	17.15	17.42
KRH30190	Soybean	cytosol, nucleus, peroxisome, plastid	8.75	16.19

Protein Annotations

EntrezGene:100781571	Gene3D:3.80.10.10	MapMan:35.1	EMBL:ACUP02008380	EnsemblPlantsGene:GLYMA_13G278800	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0007154
GO:GO:0007165	GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	UniProt:I1M3A7	InterPro:IPR001611
InterPro:IPR032675	EnsemblPlants:KRH22120	ProteinID:KRH22120	ProteinID:KRH22120.1	InterPro:LRR_5	InterPro:LRR_dom_sf
InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	PFAM:PF00560	PFAM:PF13306	PFAM:PF13855	PRINTS:PR00019
PFscan:PS51450	PANTHER:PTHR44126	SMART:SM00364	SMART:SM00369	SUPFAM:SSF52058	UniParc:UPI000233B956
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr13:+:37989524..37997368

Molecular Weight (calculated)

63806.5 Da

IEP (calculated)

5.431

GRAVY (calculated)

-0.059

Length

583 amino acids

Sequence
(BLAST)

001: MDRILKAARA SGSLNLSNRS LTEIPDEVYR NLEGLGGDDK WWEAAELQKL ILAHNSIASL KEDLRNLPFL SVLNLSHNSL SQLPAAIGEL PQLKMLDVSF
101: NSIVKIPEEI GSAVSLVKLD CSNNRLTELP SSLGRCLELS DLKGSNNLIT NLPEDLANCS KLSKLDMEGN RLTVMSENLI SSWTMLTEFN SSKNLLNGIP
201: TSIGGLSRLI RLDLHQNRIS AIPSSIIGCH SLTELYLGNN NISTLPVEIG ALSRLGTLDL HSNQLKDYPV EACKLSLLVL DLSNNSLSGL PPEMGKMTTL
301: RKLLLSGNPM RTLRSSLVSG PTPALLKFLR SRLSEDEDSE AVTTTKEVIT MATRLSISSK ELSMEELGLS AVPSEVWESG EVIKLNLSRN SIQELPVELS
401: SCVSLQTLIL SKNQIKDWPG SILKSLSSLS CLKLDNNPLR QIPSDGFEMV PKLQILDLSG NAASLLDGPA FSSLPYLQEL YLRRMRLSEV PSDIVGLHQL
501: RILDLSQNSL QSIPVGLKAL TSLQELDLSN NNIAVLPPEL GLLEPSLQAL RLDGNPLRSI RRTVLDKGTK AVLQYLKDKL PEQ

Best Arabidopsis Sequence Match ( AT3G15410.1 )
(BLAST)

001: MDRILKAART SGSLNLSNRS LKDVPTEVYQ CLETTGEGEN WWEAVDLQKL ILAHNDIEVL REDLKNLACL VVLNVSHNKL SQLPAAIGEL TAMKSLDVSF
101: NSISELPEQI GSAISLVKLD CSSNRLKELP DSIGRCLDLS DLKATNNQIS SLPEDMVNCS KLSKLDVEGN KLTALSENHI ASWTMLAELN ACKNMLGVLP
201: QNIGSLSRLI RLDLHQNKIS SVPPSIGGCS SLVEFYLGIN SLSTLPAEIG DLSRLGTLDL RSNQLKEYPV GACKLKLSYL DLSNNSLTGL HPELGNMTTL
301: RKLVLVGNPL RTLRSSLVNG PTAALLKYLR SRLSNSEETS ASTPTKENVI ASAARMSISS KELSLEGLNL SDVPSEVWES GEITKVNLSK NSIEELPAQL
401: STSVSLQTLI LSRNKIKDWP GAILKSLPNL MCLKLDNNPL NQIPLDGFQV VSGLQILDLS VNAVSFREHP KFCHLPQLRE LYLSRIQLSE VPEDILNLSN
501: LIILDLNQNS LQSIPKGIKN MTSLKHLDIS NNNISSLPPE LGLLEPTLEV LRLDGNPLRS IRRPILERGT KAVLNYLKDR LPDQ

Arabidopsis Description

Leucine-rich repeat (LRR) family protein [Source:UniProtKB/TrEMBL;Acc:F4IYR7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.