CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
extracellular 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr1P13500_001	Banana	plastid	58.35	55.01
AT1G12970.1	Thale cress	cytosol	54.45	54.09
CDY16042	Canola	cytosol	53.58	53.35
Bra026944.1-P	Field mustard	cytosol	53.36	53.13
CDY26604	Canola	cytosol	53.36	53.13
Bra032935.1-P	Field mustard	plastid	49.89	51.57
CDY69629	Canola	cytosol	37.96	51.47
GSMUA_Achr8P28520_001	Banana	cytosol, nucleus, plastid	55.31	50.9
CDY48988	Canola	cytosol	51.84	50.53
AT3G26500.1	Thale cress	cytosol	51.19	50.11
KRH63625	Soybean	nucleus	54.23	48.73
KRH57134	Soybean	plastid	52.28	47.16
HORVU7Hr1G066320.3	Barley	cytosol	28.63	47.14
Zm00001d025681_P001	Maize	plasma membrane	50.54	46.41
TraesCS6D01G191800.1	Wheat	plastid	49.46	46.25
HORVU2Hr1G082540.6	Barley	cytosol, mitochondrion	40.56	45.61
TraesCS2D01G335800.1	Wheat	cytosol, plastid	49.46	45.42
TraesCS2A01G327100.1	Wheat	cytosol, plastid	49.24	45.13
TraesCS2B01G354900.1	Wheat	plastid	49.02	45.02
EES10994	Sorghum	plastid	49.89	45.01
Os02t0593600-01	Rice	plasma membrane	47.72	43.91
EES05350	Sorghum	plastid	47.51	43.54
HORVU6Hr1G053210.1	Barley	cytosol, plastid	48.16	43.02
Zm00001d017071_P002	Maize	plastid	48.16	41.97
KRH02753	Soybean	cytosol	27.77	35.56
KRH37361	Soybean	cytosol	26.03	33.8
KRH12356	Soybean	cytosol	25.38	32.23
KRH54661	Soybean	cytosol	16.05	28.35
KRH63260	Soybean	cytosol	15.84	27.97
KRH58211	Soybean	mitochondrion	14.1	27.54
KRH39397	Soybean	nucleus	29.28	24.5
KRH07815	Soybean	cytosol	28.42	23.91
KRH28950	Soybean	cytosol	29.07	23.63
KRH76512	Soybean	nucleus	29.28	23.52
KRH04326	Soybean	cytosol	25.38	22.59
KRG98234	Soybean	cytosol	17.79	21.87
KRH30190	Soybean	cytosol, nucleus, peroxisome, plastid	13.67	20.0
KRH27219	Soybean	cytosol	21.91	17.24
KRH22120	Soybean	cytosol	21.69	17.15

Protein Annotations

Gene3D:1.10.10.2190	EntrezGene:100797180	Gene3D:3.80.10.10	MapMan:35.1	EMBL:ACUP02000043	EnsemblPlantsGene:GLYMA_01G025600
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	UniProt:I1J534	InterPro:IPR001611	InterPro:IPR032675
EnsemblPlants:KRH74520	ProteinID:KRH74520	ProteinID:KRH74520.1	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp
PFAM:PF13855	PFscan:PS51450	PANTHER:PTHR44373	PANTHER:PTHR44373:SF1	SMART:SM00364	SMART:SM00369
SUPFAM:SSF52058	UniParc:UPI0002336FE1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:2702813..2706006

Molecular Weight (calculated)

50961.2 Da

IEP (calculated)

5.114

GRAVY (calculated)

-0.145

Length

461 amino acids

Sequence
(BLAST)

001: MNPNPNTNDF PLLSHLLNHL DPQTHPPLPA ELDQSLLTQF PHLNHPSVLS SLARHASTLN VTPTLSLLRT LGPRPDPSAV AAARARIADP HAREDGGEAH
101: VVHALVRVDD THEECVKQLR ASEKKLLEAY AESVKGVVEE VSEGVVRVLK KAESEEVERV DLSGSHLRIL PEAFGKIRGL VVLNLSQNQL EVIPDSIAGL
201: QRLVELDVSS NVLESLPDSI GLLVNLKIFN VSANKLTALP ESIALCRSLV ELDASFNNLM CLPTNMGFGL VNLEKLLIHL NKIRFLPASI GEMKSLRHLD
301: VHFNELHGLP QSIGKLTNLE YLNVSSNFSD MTELPETLGD LVNLRELDLS NNQIRALPYS FGRLEKLTKL NLDQNPIIVP PIEVVNQGAE AVKEFMAKWW
401: LDLIEEAQQK SMSETQNQQA QTGWLAWGAS LLNNVAEVSE SVAEYFGAKK APRDPWLDQQ L

Best Arabidopsis Sequence Match ( AT1G12970.1 )
(BLAST)

001: MDHDLEIFPL LSYVLHHSDP ASHAPPSLAI QQSLANRYPL LTNPYVISSL IESIPSTITQ TLFVFGSLGP RPDPLAVSSA RSKIREIKEN DSLSPEDAAK
101: EEQVYAAVVS LEEVHEGYEK QLRDLEEEIG RVYASAVESL SGGDEVNEEV LAVIKDAEDG GVVERIDLSD HELKLLPDAL GKIVGLVSLN VSRNNLRFLP
201: DTISGLEKLE ELDLSSNRLV FLPDSIGLLL NLRILNVTGN KLTLLPESIA QCRSLVELDA SFNNLTSLPA NFGYGLLNLE RLSIQLNKIR FFPNSICEMR
301: SLRYLDAHMN EIHGLPIAIG RLTNLEVMNL SSNFSDLIEL PDTISDLANL RELDLSNNQI RVLPDSFFRL EKLEKLNLDQ NPLEYPPQEM VNQSAEAVRE
401: FMRKRWEEMV EEEQLRSVIE AEKQQGGATG WLSWGSSIVT SLFSGGTHGG AAKKPKNSFL DEQL

Arabidopsis Description

PIRL3Plant intracellular Ras-group-related LRR protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8W4Q3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.