Factsheet for Zm00001d025681_P001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

plasma membrane: 23508561

msms PMID: 23508561 doi

Z Zhang, P Voothuluru, M Yamaguchi, RE Sharp, SC Peck

Division of Biochemistry, University of Missouri Columbia, MO, USA ; Christopher S. Bond Life Sciences Center, University of Missouri Columbia, MO, USA ; Interdisciplinary Plant Group, University of Missouri Columbia, MO, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES10994	Sorghum	plastid	90.84	89.24
TraesCS2D01G335800.1	Wheat	cytosol, plastid	79.08	79.08
TraesCS2B01G354900.1	Wheat	plastid	78.69	78.69
TraesCS2A01G327100.1	Wheat	cytosol, plastid	78.69	78.53
HORVU2Hr1G082540.6	Barley	cytosol, mitochondrion	52.79	64.63
HORVU7Hr1G066320.3	Barley	cytosol	33.86	60.71
Zm00001d017071_P002	Maize	plastid	62.95	59.74
GSMUA_Achr1P13500_001	Banana	plastid	57.37	58.9
GSMUA_Achr8P28520_001	Banana	cytosol, nucleus, plastid	57.57	57.68
CDX73881	Canola	cytosol	48.21	56.28
CDY00732	Canola	cytosol	47.81	55.81
CDY01012	Canola	plastid	52.59	55.23
CDX70122	Canola	cytosol	52.99	55.07
CDX98871	Canola	cytosol	52.99	55.07
VIT_17s0000g09230.t01	Wine grape	cytosol	49.0	54.79
Bra034849.1-P	Field mustard	plastid	52.99	53.52
CDY08535	Canola	plastid	52.79	53.32
Bra009140.1-P	Field mustard	cytosol	52.99	52.78
AT3G11330.1	Thale cress	plastid	51.99	52.3
Bra001399.1-P	Field mustard	plastid	51.59	52.01
KRH63625	Soybean	nucleus	52.99	51.85
AT5G05850.1	Thale cress	plastid	51.79	51.38
KRH57134	Soybean	plastid	52.19	51.27
Solyc03g112270.2.1	Tomato	cytosol, nucleus, plastid	52.99	50.57
KRH74520	Soybean	cytosol	46.41	50.54
PGSC0003DMT400046655	Potato	cytosol	52.59	50.19
AT1G12970.1	Thale cress	cytosol	42.43	45.91
CDY16042	Canola	cytosol	41.63	45.14
CDY26604	Canola	cytosol	41.43	44.92
Bra026944.1-P	Field mustard	cytosol	41.43	44.92
Bra032935.1-P	Field mustard	plastid	39.84	44.84
CDY69629	Canola	cytosol	29.88	44.12
AT3G26500.1	Thale cress	cytosol	41.04	43.74
CDY48988	Canola	cytosol	41.04	43.55
Zm00001d002399_P001	Maize	nucleus	17.93	35.86
Zm00001d002402_P001	Maize	cytosol, nucleus, plastid	23.9	33.06
Zm00001d030062_P001	Maize	cytosol	20.32	23.5
Zm00001d047045_P001	Maize	extracellular, mitochondrion, plasma membrane	24.9	23.41
Zm00001d031470_P001	Maize	plasma membrane	26.89	23.4
Zm00001d028191_P002	Maize	cytosol	13.74	20.78
Zm00001d018525_P004	Maize	cytosol	18.33	14.74

Protein Annotations

EntrezGene:100283123	Gene3D:3.80.10.10	MapMan:35.1	ProteinID:AQK44252.1	EMBL:BT064200	UniProt:C0P7D1
ncoils:Coil	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR001611	InterPro:IPR032675
InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	PFAM:PF13855	PFscan:PS51450	PANTHER:PTHR44373
PANTHER:PTHR44373:SF2	SMART:SM00364	SMART:SM00369	SUPFAM:SSF52058	UniParc:UPI0001948DFD	EnsemblPlantsGene:Zm00001d025681
EnsemblPlants:Zm00001d025681_P001	EnsemblPlants:Zm00001d025681_T001	SEG:seg	:	:	:

Description

Plant intracellular Ras-group-related LRR protein 3

Coordinates

chr10:+:126111325..126114597

Molecular Weight (calculated)

55251.9 Da

IEP (calculated)

4.661

GRAVY (calculated)

-0.233

Length

502 amino acids

Sequence
(BLAST)

001: MDPAPQTHPI LSYVLSRIPN LSMTKTPTAE FDIEQPPVHT PSPRTPSSAG EFELVERMPG LRHPSVLRAM TRAVADVSAA RSALQVLGPR PDHELVDSSR
101: AIVAAAEAGD SRIPAGDVEA CRAVVRLDET HDAYEALLHE AESRLERVYR SAMEGTDLDD EAAESVKDQG PVAGPEGGDA AVGEEVVAVL KQAEEGKPVD
201: SVRLVDRQLR HLPEAFGRIL GLRVLDVSRN QLEVIPDAIG GLGHLEELFL TANDLVSLPD TIGLLSNLKI LNVSSNRLRA LPDSISKCRS LVELNVSYNG
301: LTYLPTNIGY DLVNLRKLWI HMNKLRSLPS SVCEMRSLYL LDAHFNELCG LPSLFGKLSG LEILNLSSNF SDLKELPPSF GDLLNLRELD LSNNQIHALP
401: DTFGRLDKLE KLNLEQNPLV MPPEDIVNKG VDAVKEYMSK RWLDILLEEE QRRIAAETPE MSSTPKAWLT RSVSWVTDVS ESLAGYLGGN KSEKDAYLDQ
501: QF

Best Arabidopsis Sequence Match ( AT3G11330.1 )
(BLAST)

001: MAAEPNPKNF PVLSYVLARL PSFTAKSPSS SVPPFDIEQP PPSSSSSSIE IVTQMPHLTQ PDVLASMTSA ISDVAETRSI LRTLGPRPDH ESVDKARAKL
101: SEIESFLSES FEDIALTDAA AKDEKRRQEM DQEKTWCESI LKLDEVHASY EKLLKEAEER LVRIYESAEK NAAEDEENVA AVEVNEEVVG ILQHASANPV
201: DRVDLSGRKL RLLPEAFGRI QGLLVLNLSN NKLESIPDSI AGLHSLVELD VSTNSLETLP DSIGLLSKLK ILNVSTNKLT SLPDSICRCG SLVILDVSFN
301: RLTYLPTNIG PELVNLEKLL VQYNKIRSFP TSIGEMRSLK HLDAHFNELN GLPDSFVLLT NLEYLNLSSN FSDLKDLPFS FGELISLQEL DLSNNQIHAL
401: PDTFGTLDSL TKLNVDQNPL VVPPEEVVKE GVEAVKTYMG QRRISMLEEE EKKKMEEEME QANAGWLTRT TSKLKTYVAD VSEYLGSNSP RDPYLERQL

Arabidopsis Description

PIRL9Plant intracellular Ras-group-related LRR protein 9 [Source:UniProtKB/Swiss-Prot;Acc:Q8VYG9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.