Factsheet for Bra009140.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX98871	Canola	cytosol	95.44	99.59
CDX70122	Canola	cytosol	95.44	99.59
AT5G05850.1	Thale cress	plastid	92.66	92.29
Bra034850.1-P	Field mustard	nucleus	9.52	76.19
Bra001399.1-P	Field mustard	plastid	72.42	73.29
Bra034849.1-P	Field mustard	plastid	71.23	72.23
VIT_17s0000g09230.t01	Wine grape	cytosol	53.97	60.58
GSMUA_Achr1P13500_001	Banana	plastid	58.73	60.53
GSMUA_Achr8P28520_001	Banana	cytosol, nucleus, plastid	57.94	58.28
KRH57134	Soybean	plastid	58.13	57.34
KRH63625	Soybean	nucleus	58.13	57.12
PGSC0003DMT400046655	Potato	cytosol	55.36	53.04
Zm00001d025681_P001	Maize	plasma membrane	52.78	52.99
Solyc03g112270.2.1	Tomato	cytosol, nucleus, plastid	54.76	52.47
TraesCS2D01G335800.1	Wheat	cytosol, plastid	51.39	51.59
TraesCS2B01G354900.1	Wheat	plastid	51.39	51.59
TraesCS2A01G327100.1	Wheat	cytosol, plastid	51.39	51.49
EES10994	Sorghum	plastid	52.18	51.47
Os02t0593600-01	Rice	plasma membrane	50.79	51.1
TraesCS6D01G191800.1	Wheat	plastid	49.8	50.91
EES05350	Sorghum	plastid	49.21	49.3
HORVU7Hr1G066320.3	Barley	cytosol	27.18	48.93
HORVU6Hr1G053210.1	Barley	cytosol, plastid	49.6	48.45
Bra032935.1-P	Field mustard	plastid	41.87	47.31
Bra026944.1-P	Field mustard	cytosol	43.45	47.3
Zm00001d017071_P002	Maize	plastid	49.21	46.88
HORVU2Hr1G082540.6	Barley	cytosol, mitochondrion	37.5	46.1
Bra019126.1-P	Field mustard	cytosol, plastid	26.39	33.67
Bra024119.1-P	Field mustard	cytosol	24.01	33.06
Bra013944.1-P	Field mustard	cytosol, plastid	25.99	32.91
Bra038857.1-P	Field mustard	nucleus, plastid	24.01	31.51
Bra028680.1-P	Field mustard	cytosol	15.08	28.79
Bra005960.1-P	Field mustard	cytosol, mitochondrion, nucleus	14.68	28.24
Bra011617.1-P	Field mustard	cytosol	24.8	27.35
Bra024514.1-P	Field mustard	cytosol	25.99	26.2
Bra037271.1-P	Field mustard	cytosol	26.19	25.63
Bra017712.1-P	Field mustard	nucleus	26.79	24.77
Bra021606.1-P	Field mustard	cytosol	15.48	21.49
Bra027245.1-P	Field mustard	nucleus	20.24	17.44

Protein Annotations

Gene3D:3.80.10.10	MapMan:35.1	EnsemblPlantsGene:Bra009140	EnsemblPlants:Bra009140.1	EnsemblPlants:Bra009140.1-P	ncoils:Coil
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0007275	GO:GO:0008150	GO:GO:0009555
GO:GO:0055046	InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp
UniProt:M4CY43	PFAM:PF13855	PFscan:PS51450	PANTHER:PTHR44373	SMART:SM00364	SMART:SM00369
SUPFAM:SSF52058	UniParc:UPI0002544C5C	SEG:seg	:	:	:

Description

AT5G05850 (E=5e-229) | leucine-rich repeat family protein

Coordinates

chrA10:-:15394708..15396841

Molecular Weight (calculated)

56153.7 Da

IEP (calculated)

4.452

GRAVY (calculated)

-0.308

Length

504 amino acids

Sequence
(BLAST)

001: MATELNPNNF PVLSYVLDRL PSFTAKSSSD GDKPPSKSDP SSSSSHSIEI VTQMPHLAHP DVLASMTSAI ADVSQTRSVL RTLGPRPDHE TVDKARARLA
101: EIDASLSESF EEIALSANDV DVAEKEQKRR EAVDQEKTWY NSILKLNELH ESYEKLLKEG EERLVRIYES AEKNAAAVAE EEAKEVEVSE EVVSILQQAE
201: EKPLDRVDLS GRKLKLLPEA FGRIQGLLVL NLYNNQLEAI PDSIAGLHSL LELDLSTNFL ETLPDSIGLL SKLKILNVSC NKLTTLPDSI CKCGSLVVLD
301: ASYNNLTYLP TNIGFELVHL EKLLIHLNKI RSLPTSVGEM RSLRYLDAHF NELNGLPESF GMLTNLEYLN LSSNFSDLQD LPASFGDLIS LQELDLSNNQ
401: IHSLPDAFGT LVNLTKLNLD QNPLVVPPEE VVKQGVDAVK MYMGKRWVSM LEEEEKMANM KEEMEQANAD WLARTTSKLK TYVTEVSEYL GSNSPKDPFL
501: DQQL

Best Arabidopsis Sequence Match ( AT5G05850.1 )
(BLAST)

001: MATELNPKNF PVLSYVLDRL PSFTAKSSSS SDVEPPPSKS DPSSSSNHSI EIVTQMPHLA HPDVLASMTN ATADVSQTRS VLRTLGPRPD HETVDRARAR
101: LREIDASLSE SFEEIALSPN DIDVAEKEQK RREAVEQEKI WYKSILKLNE LHESYEKLLK EAEERLVRIY ESAEKNAAAV AEEEAAEVEV NEEVVSILQQ
201: AAENPLDRVD LSGRKLKLLP EAFGKIQGLL VLNLYNNQLQ AIPDSIAGLH NLLELDVSTN FLETLPDSIG LLSKLKILNV SCNKLTTLPD SICHCGSLVV
301: LDASYNNLTY LPTNIGFELV KLEKLLIHLN KIRSLPTSIG EMRSLRYLDA HFNELNGLPN SFGLLTNLEY LNLSSNFSDL QDLPASFGDL ISLQELDLSN
401: NQIHSLPDAF GTLVNLTKLN LDQNPLVVPP DEVVKQGVDA VKMYMGKRWV SMLEEEEKMA NMKDEMDQTN TDWLTRTTSK LKTYVTEVSE YLGSNPPRDP
501: YLDQQL

Arabidopsis Description

PIRL1Plant intracellular Ras-group-related LRR protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FFJ3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.