Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU7Hr1G066320.3 | Barley | cytosol | 49.51 | 72.5 |
| TraesCS2D01G335800.1 | Wheat | cytosol, plastid | 78.29 | 63.94 |
| TraesCS2A01G327100.1 | Wheat | cytosol, plastid | 78.29 | 63.82 |
| TraesCS2B01G354900.1 | Wheat | plastid | 78.05 | 63.74 |
| EES10994 | Sorghum | plastid | 66.34 | 53.23 |
| Zm00001d025681_P001 | Maize | plasma membrane | 64.63 | 52.79 |
| VIT_17s0000g09230.t01 | Wine grape | cytosol | 47.8 | 43.65 |
| GSMUA_Achr1P13500_001 | Banana | plastid | 51.46 | 43.15 |
| HORVU6Hr1G053210.1 | Barley | cytosol, plastid | 53.9 | 42.83 |
| GSMUA_Achr8P28520_001 | Banana | cytosol, nucleus, plastid | 51.95 | 42.52 |
| CDY00732 | Canola | cytosol | 44.15 | 42.09 |
| CDX73881 | Canola | cytosol | 43.66 | 41.63 |
| KRH74520 | Soybean | cytosol | 45.61 | 40.56 |
| CDX70122 | Canola | cytosol | 46.1 | 39.13 |
| CDX98871 | Canola | cytosol | 46.1 | 39.13 |
| Bra032935.1-P | Field mustard | plastid | 42.2 | 38.79 |
| CDY01012 | Canola | plastid | 45.12 | 38.7 |
| KRH63625 | Soybean | nucleus | 48.05 | 38.4 |
| KRH57134 | Soybean | plastid | 47.32 | 37.96 |
| CDY08535 | Canola | plastid | 45.61 | 37.63 |
| Bra034849.1-P | Field mustard | plastid | 45.61 | 37.63 |
| CDY16042 | Canola | cytosol | 42.44 | 37.58 |
| CDY26604 | Canola | cytosol | 42.44 | 37.58 |
| Bra026944.1-P | Field mustard | cytosol | 42.44 | 37.58 |
| Bra009140.1-P | Field mustard | cytosol | 46.1 | 37.5 |
| AT1G12970.1 | Thale cress | cytosol | 42.44 | 37.5 |
| AT3G11330.1 | Thale cress | plastid | 45.12 | 37.07 |
| PGSC0003DMT400046655 | Potato | cytosol | 46.83 | 36.5 |
| CDY48988 | Canola | cytosol | 41.95 | 36.36 |
| Solyc03g112270.2.1 | Tomato | cytosol, nucleus, plastid | 46.59 | 36.31 |
| AT5G05850.1 | Thale cress | plastid | 44.63 | 36.17 |
| Bra001399.1-P | Field mustard | plastid | 43.66 | 35.94 |
| AT3G26500.1 | Thale cress | cytosol | 41.22 | 35.88 |
| CDY69629 | Canola | cytosol | 27.56 | 33.24 |
| HORVU4Hr1G068710.2 | Barley | cytosol, mitochondrion, nucleus, plastid | 16.1 | 25.19 |
| HORVU2Hr1G101090.6 | Barley | plastid | 25.85 | 25.12 |
| HORVU6Hr1G093360.11 | Barley | nucleus | 20.0 | 22.1 |
| HORVU1Hr1G037810.14 | Barley | cytosol, nucleus, peroxisome | 18.29 | 20.11 |
| HORVU1Hr1G049900.1 | Barley | cytosol, extracellular, mitochondrion, plastid | 27.07 | 19.37 |
| HORVU6Hr1G093540.7 | Barley | cytosol | 2.93 | 5.02 |
Protein Annotations
| Gene3D:3.80.10.10 | MapMan:35.1 | UniProt:A0A287INE6 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | EnsemblPlantsGene:HORVU2Hr1G082540 | EnsemblPlants:HORVU2Hr1G082540.6 | InterPro:IPR001611 | InterPro:IPR032675 | InterPro:LRR_dom_sf |
| InterPro:Leu-rich_rpt | InterPro:Leu-rich_rpt_typical-subtyp | PFAM:PF00560 | PFAM:PF13855 | PFscan:PS51450 | PANTHER:PTHR44373 |
| PANTHER:PTHR44373:SF2 | SMART:SM00364 | SMART:SM00369 | SUPFAM:SSF52058 | UniParc:UPI000B465F08 | SEG:seg |
Description
No Description!
Coordinates
chrchr2H:+:598760193..598779113
Molecular Weight (calculated)
37233.7 Da
IEP (calculated)
5.128
GRAVY (calculated)
-0.097
Length
410 amino acids
Sequence
(BLAST)
(BLAST)
001: PRPRGPRRVA AAAASDVVXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XVLKQAEEGK
101: PVESVLLVDR QLRYLPEAFG RILGLRVLDV SHNQLQVIPD AIGGLEHLEE LRLASNALVS LPDTVGFLSN LKILNVSTNK LRTLPDSISK CRSLVELDAS
201: YNGLTYLPTN IGYELINLRK LWVHMNKLRS FPSSICEMQS LYLLDAHFNE LCGLPSAIGK LSSLEILNLS SNFSDMKELP FSFGDLLNLR EVDLSNNQIH
301: ALPDSFGRLD KLEKLNLEQN PLSMPSAEVV KEGVEAVKEY MSKRWLDALL EEEQRSMAEA AAAESLQAST PKAWLARSVS WVSDVGGSFV GYVSGGQTKS
401: EKDSILDQQF
101: PVESVLLVDR QLRYLPEAFG RILGLRVLDV SHNQLQVIPD AIGGLEHLEE LRLASNALVS LPDTVGFLSN LKILNVSTNK LRTLPDSISK CRSLVELDAS
201: YNGLTYLPTN IGYELINLRK LWVHMNKLRS FPSSICEMQS LYLLDAHFNE LCGLPSAIGK LSSLEILNLS SNFSDMKELP FSFGDLLNLR EVDLSNNQIH
301: ALPDSFGRLD KLEKLNLEQN PLSMPSAEVV KEGVEAVKEY MSKRWLDALL EEEQRSMAEA AAAESLQAST PKAWLARSVS WVSDVGGSFV GYVSGGQTKS
401: EKDSILDQQF
001: MDHDLEIFPL LSYVLHHSDP ASHAPPSLAI QQSLANRYPL LTNPYVISSL IESIPSTITQ TLFVFGSLGP RPDPLAVSSA RSKIREIKEN DSLSPEDAAK
101: EEQVYAAVVS LEEVHEGYEK QLRDLEEEIG RVYASAVESL SGGDEVNEEV LAVIKDAEDG GVVERIDLSD HELKLLPDAL GKIVGLVSLN VSRNNLRFLP
201: DTISGLEKLE ELDLSSNRLV FLPDSIGLLL NLRILNVTGN KLTLLPESIA QCRSLVELDA SFNNLTSLPA NFGYGLLNLE RLSIQLNKIR FFPNSICEMR
301: SLRYLDAHMN EIHGLPIAIG RLTNLEVMNL SSNFSDLIEL PDTISDLANL RELDLSNNQI RVLPDSFFRL EKLEKLNLDQ NPLEYPPQEM VNQSAEAVRE
401: FMRKRWEEMV EEEQLRSVIE AEKQQGGATG WLSWGSSIVT SLFSGGTHGG AAKKPKNSFL DEQL
101: EEQVYAAVVS LEEVHEGYEK QLRDLEEEIG RVYASAVESL SGGDEVNEEV LAVIKDAEDG GVVERIDLSD HELKLLPDAL GKIVGLVSLN VSRNNLRFLP
201: DTISGLEKLE ELDLSSNRLV FLPDSIGLLL NLRILNVTGN KLTLLPESIA QCRSLVELDA SFNNLTSLPA NFGYGLLNLE RLSIQLNKIR FFPNSICEMR
301: SLRYLDAHMN EIHGLPIAIG RLTNLEVMNL SSNFSDLIEL PDTISDLANL RELDLSNNQI RVLPDSFFRL EKLEKLNLDQ NPLEYPPQEM VNQSAEAVRE
401: FMRKRWEEMV EEEQLRSVIE AEKQQGGATG WLSWGSSIVT SLFSGGTHGG AAKKPKNSFL DEQL
Arabidopsis Description
PIRL3Plant intracellular Ras-group-related LRR protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8W4Q3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.