Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU2Hr1G101090.6 | Barley | plastid | 7.95 | 4.5 |
| HORVU4Hr1G068710.2 | Barley | cytosol, mitochondrion, nucleus, plastid | 3.77 | 3.44 |
| HORVU2Hr1G082540.6 | Barley | cytosol, mitochondrion | 5.02 | 2.93 |
| HORVU6Hr1G093360.11 | Barley | nucleus | 4.18 | 2.7 |
| HORVU6Hr1G053210.1 | Barley | cytosol, plastid | 3.77 | 1.74 |
| HORVU1Hr1G037810.14 | Barley | cytosol, nucleus, peroxisome | 2.51 | 1.61 |
| HORVU7Hr1G066320.3 | Barley | cytosol | 0.84 | 0.71 |
| HORVU1Hr1G049900.1 | Barley | cytosol, extracellular, mitochondrion, plastid | 1.26 | 0.52 |
Protein Annotations
| EnsemblPlants:HORVU6Hr1G093540.7 | EnsemblPlantsGene:HORVU6Hr1G093540 | Gene3D:3.80.10.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR001611 | InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt | InterPro:Leu-rich_rpt_typical-subtyp | PANTHER:PTHR44126 |
| PFAM:PF13855 | PFscan:PS51450 | SMART:SM00369 | SUPFAM:SSF52058 | UniParc:UPI000B47E72B | UniProt:A0A287V8L1 |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr6H:-:579643210..579645388
Molecular Weight (calculated)
25879.4 Da
IEP (calculated)
5.327
GRAVY (calculated)
0.014
Length
239 amino acids
Sequence
(BLAST)
(BLAST)
001: GLESPCHPPG TSIDSLELNL SGLGVPNVPP AAWETSDVVK LDLSKNLIED LPNELSLCSS LQALILSNNK IKKWPGMVVS SLPSLTSLKL DNNPLAAISS
101: TDVESLSKLE VLDLSGNASS LTEPSVISSL PQLHELYLRR MKLQGFPIGL FQLKHLRILS LSQNHLTTIP EGIKDFSALV ELDLSDNNIT ALPAELGLLE
201: PSLQVLKLDG NPLRSIRRTV LERGTKAVLS YLKEKLPSN
101: TDVESLSKLE VLDLSGNASS LTEPSVISSL PQLHELYLRR MKLQGFPIGL FQLKHLRILS LSQNHLTTIP EGIKDFSALV ELDLSDNNIT ALPAELGLLE
201: PSLQVLKLDG NPLRSIRRTV LERGTKAVLS YLKEKLPSN
001: MDRILKAART SGSLNLSNRS LKDVPTEVYQ CLETTGEGEN WWEAVDLQKL ILAHNDIEVL REDLKNLACL VVLNVSHNKL SQLPAAIGEL TAMKSLDVSF
101: NSISELPEQI GSAISLVKLD CSSNRLKELP DSIGRCLDLS DLKATNNQIS SLPEDMVNCS KLSKLDVEGN KLTALSENHI ASWTMLAELN ACKNMLGVLP
201: QNIGSLSRLI RLDLHQNKIS SVPPSIGGCS SLVEFYLGIN SLSTLPAEIG DLSRLGTLDL RSNQLKEYPV GACKLKLSYL DLSNNSLTGL HPELGNMTTL
301: RKLVLVGNPL RTLRSSLVNG PTAALLKYLR SRLSNSEETS ASTPTKENVI ASAARMSISS KELSLEGLNL SDVPSEVWES GEITKVNLSK NSIEELPAQL
401: STSVSLQTLI LSRNKIKDWP GAILKSLPNL MCLKLDNNPL NQIPLDGFQV VSGLQILDLS VNAVSFREHP KFCHLPQLRE LYLSRIQLSE VPEDILNLSN
501: LIILDLNQNS LQSIPKGIKN MTSLKHLDIS NNNISSLPPE LGLLEPTLEV LRLDGNPLRS IRRPILERGT KAVLNYLKDR LPDQ
101: NSISELPEQI GSAISLVKLD CSSNRLKELP DSIGRCLDLS DLKATNNQIS SLPEDMVNCS KLSKLDVEGN KLTALSENHI ASWTMLAELN ACKNMLGVLP
201: QNIGSLSRLI RLDLHQNKIS SVPPSIGGCS SLVEFYLGIN SLSTLPAEIG DLSRLGTLDL RSNQLKEYPV GACKLKLSYL DLSNNSLTGL HPELGNMTTL
301: RKLVLVGNPL RTLRSSLVNG PTAALLKYLR SRLSNSEETS ASTPTKENVI ASAARMSISS KELSLEGLNL SDVPSEVWES GEITKVNLSK NSIEELPAQL
401: STSVSLQTLI LSRNKIKDWP GAILKSLPNL MCLKLDNNPL NQIPLDGFQV VSGLQILDLS VNAVSFREHP KFCHLPQLRE LYLSRIQLSE VPEDILNLSN
501: LIILDLNQNS LQSIPKGIKN MTSLKHLDIS NNNISSLPPE LGLLEPTLEV LRLDGNPLRS IRRPILERGT KAVLNYLKDR LPDQ
Arabidopsis Description
Leucine-rich repeat (LRR) family protein [Source:UniProtKB/TrEMBL;Acc:F4IYR7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.