Factsheet for HORVU1Hr1G049900.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, extracellular, cytosol

Predictor Summary:

plastid 1
mitochondrion 2
cytosol 1
extracellular 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular, mitochondrion, plastid
Any Predictor:	cytosol, mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
TargetP:	mitochondrion
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G205800.2	Wheat	cytosol	90.75	97.2
TraesCS1A01G190500.1	Wheat	cytosol	90.58	97.19
TraesCS1D01G194700.1	Wheat	cytosol	89.88	96.62
KXG38871	Sorghum	cytosol	73.3	78.07
Zm00001d047045_P001	Maize	extracellular, mitochondrion, plasma membrane	72.08	77.34
Os10t0572300-01	Rice	plasma membrane	72.95	76.98
Zm00001d030062_P001	Maize	cytosol	58.29	76.96
GSMUA_Achr4P21530_001	Banana	cytosol	57.07	61.58
GSMUA_Achr4P19230_001	Banana	cytosol	55.85	61.42
VIT_02s0012g01010.t01	Wine grape	cytosol	52.71	56.66
PGSC0003DMT400052889	Potato	cytosol	41.54	55.74
KRH04326	Soybean	cytosol	49.04	54.25
Solyc08g006970.2.1	Tomato	cytosol	47.29	53.35
KRH58211	Soybean	mitochondrion	17.63	42.8
HORVU7Hr1G066320.3	Barley	cytosol	15.01	30.71
HORVU2Hr1G082540.6	Barley	cytosol, mitochondrion	19.37	27.07
HORVU4Hr1G068710.2	Barley	cytosol, mitochondrion, nucleus, plastid	12.04	26.34
HORVU2Hr1G101090.6	Barley	plastid	18.5	25.12
HORVU6Hr1G053210.1	Barley	cytosol, plastid	22.16	24.61
HORVU6Hr1G093360.11	Barley	nucleus	14.31	22.1
HORVU1Hr1G037810.14	Barley	cytosol, nucleus, peroxisome	13.96	21.45
HORVU6Hr1G093540.7	Barley	cytosol	0.52	1.26

Protein Annotations

Gene3D:3.80.10.10	MapMan:35.1	UniProt:A0A287FHX2	ncoils:Coil	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0008150	GO:GO:0009416	GO:GO:0009628	EnsemblPlantsGene:HORVU1Hr1G049900	EnsemblPlants:HORVU1Hr1G049900.1
InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	PFAM:PF00560
PFAM:PF13855	PFscan:PS51450	PANTHER:PTHR44513	PANTHER:PTHR44513:SF3	SMART:SM00364	SMART:SM00369
SUPFAM:SSF52058	UniParc:UPI000B470C01	SEG:seg	:	:	:

Description

No Description!

Coordinates

chrchr1H:-:369363272..369367399

Molecular Weight (calculated)

62895.7 Da

IEP (calculated)

4.995

GRAVY (calculated)

-0.062

Length

573 amino acids

Sequence
(BLAST)

001: ATLPVFPLLY TKAHHTRSYS RPAPLSLGRF CFSVWFAEMA AAAATADVVE ELTRVYRELP PRPAVEEVEA AAAVLASADA EEEARLADVA REEAARLREA
101: EGVPRELLSV LREARRAAVR LRALQQRKEA AHVVELERRF KLLDGLIQRA SRVVSPSDEG SSGGGGGVEM EEVVEEMDAK RIDVAAAAAA VGEIERGNRG
201: VGFGLDSKAV SSLLRNGSTG SDMVDQKLSL IQVASLIESS AKRGTTELNL RGKLLDQIEW LPVSLGKLQD VTELDISENR IMALPSTVGS LRYLTKLDLH
301: SNQLINLPDT FGELCSLIDL DLHANQLKSL PASFGNLTSL ANLDLSSNQF KILPDCIGKL MNLRRLIAET NELEELPYTI GSCISLVELR LDFNQLKALP
401: EGIGKLEKLE ILTLHYNRIK GLPTTIGSLT RLRELDVSFN EVEGIPESIC FATSLVKLNV SRNFADLRAL PRSIGNLEML EELDISSNQI RMLPDSFEFL
501: AKLRVFHADE TPLEVPPREV IKLGAQAVVQ YVADMVASRG ASQKKTDGTS FWAWFRSLFG CCKKDEELGL VPA

Best Arabidopsis Sequence Match ( AT4G35470.1 )
(BLAST)

001: MDLMQMDKRL DSTEQVVEEI MRIHRSLPAR PGIDEVEAAK GLIDNVEKED QACLEAIARQ RKSSEVPGEL FMVLQEMKKG YVQFRSKEQI REALKLLDLE
101: SVHSLFDDFI QRASNCIASP SSNGSVSSRP PLPPATTTAA RSDSQSSLNF SERAPVRPKD MVSRDDSFVT KSKPSSLYSD GFAAPPRRPQ ILDSTLTTGN
201: DGEKLSLIKL ASLIEVSAKK ATQEINLQNK LTEQLEWLPD SLGKLSSLTS LDLSENHIVV LPNTIGGLSS LTKLDLHSNR IGQLPESIGE LLNLVYLNLG
301: SNQLSSLPSA FSRLVRLEEL DLSCNNLPIL PESIGSLVSL KKLDVETNDI EEIPYSIGGC SSLIELRADY NKLKALPEAI GKITTLEILS VRYNNIRQLP
401: TTMSSLASLK ELDVSFNELE SVPESLCFAT TLVKLNIGNN FADMVSLPRS IGNLEMLEEL DISNNQIRVL PDSFKMLTKL RVFRAQENPL HIPPRDIAEK
501: GPQAVVQYMN DLVETRNAKS LMVKPKKSWV QMCFFSKSNK RKQSSMEIV

Arabidopsis Description

PIRL4Plant intracellular Ras-group-related LRR protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SVW8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.