CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
extracellular 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, extracellular, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	extracellular
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d030062_P001	Maize	cytosol	74.54	92.4
Zm00001d047045_P001	Maize	extracellular, mitochondrion, plasma membrane	91.26	91.95
TraesCS1D01G194700.1	Wheat	cytosol	78.07	78.8
TraesCS1B01G205800.2	Wheat	cytosol	78.25	78.69
TraesCS1A01G190500.1	Wheat	cytosol	77.88	78.46
Os10t0572300-01	Rice	plasma membrane	77.88	77.16
HORVU1Hr1G049900.1	Barley	cytosol, extracellular, mitochondrion, plastid	78.07	73.3
GSMUA_Achr4P19230_001	Banana	cytosol	60.41	62.38
GSMUA_Achr4P21530_001	Banana	cytosol	60.41	61.21
VIT_02s0012g01010.t01	Wine grape	cytosol	55.2	55.72
PGSC0003DMT400052889	Potato	cytosol	43.49	54.8
KRH04326	Soybean	cytosol	51.67	53.67
Solyc08g006970.2.1	Tomato	cytosol	49.44	52.36
EES14257	Sorghum	nucleus	48.14	44.81
KRH58211	Soybean	mitochondrion	17.47	39.83
KXG27059	Sorghum	cytosol, nucleus, plastid	19.52	28.93
EER95291	Sorghum	cytosol	13.2	27.1
EES05350	Sorghum	plastid	25.09	26.84
EES10994	Sorghum	plastid	23.42	24.66
EER94139	Sorghum	cytosol	15.43	22.19
EES07794	Sorghum	cytosol	15.61	14.33

Protein Annotations

Gene3D:3.80.10.10	MapMan:35.1	EntrezGene:8055156	UniProt:C5WRD0	ProteinID:EER94453.1	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0007154
GO:GO:0007165	GO:GO:0008150	GO:GO:0009416	GO:GO:0009628	GO:GO:0009987	GO:GO:0016020
InterPro:IPR001611	InterPro:IPR032675	EnsemblPlants:KXG38871	ProteinID:KXG38871	ProteinID:KXG38871.1	InterPro:LRR_dom_sf
InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	PFAM:PF00560	PFAM:PF13855	PFscan:PS51450	PANTHER:PTHR44513
PANTHER:PTHR44513:SF3	SMART:SM00364	SMART:SM00369	EnsemblPlantsGene:SORBI_3001G290200	SUPFAM:SSF52058	UniParc:UPI0001A82EB3
RefSeq:XP_002467455.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:56720149..56724719

Molecular Weight (calculated)

58745.7 Da

IEP (calculated)

5.169

GRAVY (calculated)

-0.106

Length

538 amino acids

Sequence
(BLAST)

001: MAAAGGMTPA TVDAVEELTR LYRELPPRPA VEEVEAAAAV LASADAEEEA RLAEIAREEE AARARAPAQG VAAELFDVLL EARRNSVRLR ALQQRKEAAH
101: VVELERRFKL FDELIQRASR VVSPGGGGGA RGGGGVAVVD HEVVEVEARR NPALVAAAAT EIDRGSRGGL GLEPTSVSSL RRAASAGTDT EKLGLIQVAS
201: LIESSARKGT TELNLRGKLV DQVEWLPVSL GKLQDVTELD LSENRIMALP STIGSLRYLT KLDLHSNQLI NLPDTFGELS CLIDLDLRAN QLKSLPTSFG
301: NLTSLANLDL SSNLLKVLPD CLGKLKNLRR LIAETNELEE LPYTIGSCTS LVELRLDFNQ LKALPEAIGK LENLEILTLH YNRIKGLPTT IGHLTRLREL
401: DVSFNEVETI PENICFAASL VKLNVSRNFA DLRALPKSIG ELEMLEELDI SSNQIRVLPD SFGHLSKLRV FHADETPLEV PPKEVVKLGA QELVNYMKNM
501: VAAREVSQNQ TNKRSFWTWF VSLFGCCKKN EGLGPVPV

Best Arabidopsis Sequence Match ( AT4G35470.1 )
(BLAST)

001: MDLMQMDKRL DSTEQVVEEI MRIHRSLPAR PGIDEVEAAK GLIDNVEKED QACLEAIARQ RKSSEVPGEL FMVLQEMKKG YVQFRSKEQI REALKLLDLE
101: SVHSLFDDFI QRASNCIASP SSNGSVSSRP PLPPATTTAA RSDSQSSLNF SERAPVRPKD MVSRDDSFVT KSKPSSLYSD GFAAPPRRPQ ILDSTLTTGN
201: DGEKLSLIKL ASLIEVSAKK ATQEINLQNK LTEQLEWLPD SLGKLSSLTS LDLSENHIVV LPNTIGGLSS LTKLDLHSNR IGQLPESIGE LLNLVYLNLG
301: SNQLSSLPSA FSRLVRLEEL DLSCNNLPIL PESIGSLVSL KKLDVETNDI EEIPYSIGGC SSLIELRADY NKLKALPEAI GKITTLEILS VRYNNIRQLP
401: TTMSSLASLK ELDVSFNELE SVPESLCFAT TLVKLNIGNN FADMVSLPRS IGNLEMLEEL DISNNQIRVL PDSFKMLTKL RVFRAQENPL HIPPRDIAEK
501: GPQAVVQYMN DLVETRNAKS LMVKPKKSWV QMCFFSKSNK RKQSSMEIV

Arabidopsis Description

PIRL4Plant intracellular Ras-group-related LRR protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SVW8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.