CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY00732	Canola	cytosol	97.91	97.91
Bra001399.1-P	Field mustard	plastid	99.3	85.74
CDY01012	Canola	plastid	81.86	73.64
AT3G11330.1	Thale cress	plastid	84.42	72.75
CDY08535	Canola	plastid	83.02	71.83
CDX70122	Canola	cytosol	76.05	67.7
CDX98871	Canola	cytosol	76.05	67.7
VIT_17s0000g09230.t01	Wine grape	cytosol	61.4	58.8
GSMUA_Achr1P13500_001	Banana	plastid	60.0	52.76
KRH63625	Soybean	nucleus	61.86	51.85
GSMUA_Achr8P28520_001	Banana	cytosol, nucleus, plastid	59.53	51.1
KRH57134	Soybean	plastid	59.07	49.71
Zm00001d025681_P001	Maize	plasma membrane	56.28	48.21
PGSC0003DMT400046655	Potato	cytosol	58.6	47.91
HORVU7Hr1G066320.3	Barley	cytosol	30.7	47.14
TraesCS6D01G191800.1	Wheat	plastid	53.49	46.65
Solyc03g112270.2.1	Tomato	cytosol, nucleus, plastid	56.98	46.58
EES10994	Sorghum	plastid	55.12	46.38
Os02t0593600-01	Rice	plasma membrane	53.95	46.31
TraesCS2D01G335800.1	Wheat	cytosol, plastid	53.26	45.62
TraesCS2B01G354900.1	Wheat	plastid	52.79	45.22
TraesCS2A01G327100.1	Wheat	cytosol, plastid	52.79	45.13
CDY26604	Canola	cytosol	48.37	44.92
CDY16042	Canola	cytosol	48.37	44.92
HORVU6Hr1G053210.1	Barley	cytosol, plastid	53.72	44.77
CDY69629	Canola	cytosol	35.35	44.71
HORVU2Hr1G082540.6	Barley	cytosol, mitochondrion	41.63	43.66
EES05350	Sorghum	plastid	49.53	42.35
CDY48988	Canola	cytosol	46.51	42.28
Zm00001d017071_P002	Maize	plastid	51.16	41.59
CDY30187	Canola	nucleus	25.35	39.07
CDY39144	Canola	nucleus, plastid	29.3	32.81
CDX82667	Canola	nucleus, plastid	29.3	32.81
CDX89369	Canola	cytosol, plastid	30.23	32.66
CDY42760	Canola	cytosol, plastid	30.0	32.66
CDY46713	Canola	nucleus	27.67	32.51
CDX94383	Canola	cytosol	29.77	32.16
CDX92748	Canola	cytosol, plasma membrane, plastid	27.21	31.28
CDX72539	Canola	nucleus	25.81	28.24
CDY14024	Canola	mitochondrion	16.28	26.62
CDY40770	Canola	cytosol	16.05	26.14
CDX81078	Canola	mitochondrion	15.81	25.95
CDX78316	Canola	cytosol, mitochondrion, nucleus	15.81	25.95
CDY07843	Canola	nucleus	29.53	25.4
CDY66405	Canola	cytosol	29.07	25.0
CDY30364	Canola	cytosol	29.53	24.85
CDX69142	Canola	cytosol	30.0	23.71
CDY26809	Canola	nucleus	29.3	23.6
CDX75505	Canola	cytosol	29.53	23.52
CDY40632	Canola	nucleus	29.53	23.3
CDY29703	Canola	cytosol	18.14	21.49
CDX97851	Canola	cytosol	18.14	21.49
CDX97667	Canola	nucleus	22.79	16.75
CDY56828	Canola	nucleus	22.09	16.24

Protein Annotations

EnsemblPlants:CDX73881	EnsemblPlantsGene:GSBRNA2T00111598001	Gene3D:3.80.10.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	PANTHER:PTHR44373
PFAM:PF13855	PFscan:PS51450	PRINTS:PR00019	ProteinID:CDX73881	ProteinID:CDX73881.1	SEG:seg
SMART:SM00364	SMART:SM00369	SUPFAM:SSF52058	UniParc:UPI0004EE1005	MapMan:35.1	:

Description

BnaA03g31660D

Coordinates

chrLK031800:+:377289..380298

Molecular Weight (calculated)

48033.6 Da

IEP (calculated)

4.507

GRAVY (calculated)

-0.220

Length

430 amino acids

Sequence
(BLAST)

001: MPHLAEPGVL ASMTKAITDV AETRSVLRTL GPRPDHEAVD RARAKLNEIE GMLSERREMD QEKTWCESIL KLDEVHGSYE KLLSEAEERL VRIYEFAEKK
101: AKVEEGEGGV EEVEVNEEVV GILREALANP VERVDLSGRK LSLLPEAFGR IQGLLVLNLS NNQLQAIPDS IAGLHGLVEL DVSGNLLETL PDSIGLLSKL
201: KILNVSTNKL TALPDSICRC GSLVVLDVSF NRLTYLPTNI GSELVNLEKL MIQYNKIRSL PSSIGEMRSL TYLDAHFNEL HGLPDSFVLL TNLEYLNLSS
301: NFSDLKDLPS SFGDLISLQK LDLSNNQIHA LPDTFGTLES LVELNVDQNP LVVPPVEVVN EGVVAVKMYM GKRRITMLEE EERRRVEEEM EQANAGWLTR
401: TTSKLKSYVS DVSEYLNPSS PRDPYLEREL

Best Arabidopsis Sequence Match ( AT1G12970.1 )
(BLAST)

001: MDHDLEIFPL LSYVLHHSDP ASHAPPSLAI QQSLANRYPL LTNPYVISSL IESIPSTITQ TLFVFGSLGP RPDPLAVSSA RSKIREIKEN DSLSPEDAAK
101: EEQVYAAVVS LEEVHEGYEK QLRDLEEEIG RVYASAVESL SGGDEVNEEV LAVIKDAEDG GVVERIDLSD HELKLLPDAL GKIVGLVSLN VSRNNLRFLP
201: DTISGLEKLE ELDLSSNRLV FLPDSIGLLL NLRILNVTGN KLTLLPESIA QCRSLVELDA SFNNLTSLPA NFGYGLLNLE RLSIQLNKIR FFPNSICEMR
301: SLRYLDAHMN EIHGLPIAIG RLTNLEVMNL SSNFSDLIEL PDTISDLANL RELDLSNNQI RVLPDSFFRL EKLEKLNLDQ NPLEYPPQEM VNQSAEAVRE
401: FMRKRWEEMV EEEQLRSVIE AEKQQGGATG WLSWGSSIVT SLFSGGTHGG AAKKPKNSFL DEQL

Arabidopsis Description

PIRL3Plant intracellular Ras-group-related LRR protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8W4Q3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.