CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 2
plastid 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra019126.1-P	Field mustard	cytosol, plastid	99.75	99.75
CDX92748	Canola	cytosol, plasma membrane, plastid	86.84	91.71
CDX89369	Canola	cytosol, plastid	90.63	89.95
CDX94383	Canola	cytosol	90.13	89.45
AT4G26050.1	Thale cress	cytosol	85.82	88.51
VIT_11s0052g00390.t01	Wine grape	cytosol	55.44	71.1
KRH02753	Soybean	cytosol	56.46	61.94
CDY30187	Canola	nucleus	43.29	61.29
KRH37361	Soybean	cytosol	54.43	60.56
PGSC0003DMT400016538	Potato	mitochondrion	54.94	59.78
GSMUA_Achr1P23570_001	Banana	nucleus	51.65	59.48
GSMUA_AchrUn_...	Banana	nucleus	51.14	59.41
Solyc12g017480.1.1	Tomato	cytosol	53.92	58.52
KRH12356	Soybean	cytosol	53.42	58.13
CDY46713	Canola	nucleus	53.67	57.92
CDX82667	Canola	nucleus, plastid	55.44	57.03
CDY39144	Canola	nucleus, plastid	55.44	57.03
Os04t0605300-01	Rice	nucleus	50.13	56.25
Zm00001d002399_P001	Maize	nucleus	34.94	54.98
KXG27059	Sorghum	cytosol, nucleus, plastid	50.38	54.82
Zm00001d002402_P001	Maize	cytosol, nucleus, plastid	50.13	54.55
TraesCS2D01G430800.1	Wheat	cytosol, nucleus, plastid	49.37	53.87
TraesCS2B01G454100.1	Wheat	cytosol, nucleus, plastid	49.11	53.59
TraesCS2A01G432800.1	Wheat	cytosol, nucleus, plastid	49.37	53.42
HORVU2Hr1G101090.6	Barley	plastid	50.13	46.92
CDX73881	Canola	cytosol	32.66	30.0
CDY00732	Canola	cytosol	32.41	29.77
CDY01012	Canola	plastid	33.42	27.62
CDX98871	Canola	cytosol	33.67	27.54
CDX70122	Canola	cytosol	33.67	27.54
CDX72539	Canola	nucleus	26.84	26.97
CDY08535	Canola	plastid	33.16	26.36
CDY26604	Canola	cytosol	30.89	26.35
CDY16042	Canola	cytosol	30.63	26.13
CDY48988	Canola	cytosol	29.11	24.31
CDY69629	Canola	cytosol	20.51	23.82
CDX81078	Canola	mitochondrion	15.7	23.66
CDY40770	Canola	cytosol	15.7	23.48
CDX78316	Canola	cytosol, mitochondrion, nucleus	15.44	23.28
CDY14024	Canola	mitochondrion	15.44	23.19
CDY66405	Canola	cytosol	26.58	21.0
CDY07843	Canola	nucleus	26.08	20.6
CDX69142	Canola	cytosol	28.1	20.4
CDX75505	Canola	cytosol	27.85	20.37
CDY30364	Canola	cytosol	25.06	19.37
CDY40632	Canola	nucleus	26.58	19.27
CDY26809	Canola	nucleus	25.06	18.54
CDY29703	Canola	cytosol	15.95	17.36
CDX97851	Canola	cytosol	15.7	17.08
CDX97667	Canola	nucleus	22.53	15.21
CDY56828	Canola	nucleus	22.03	14.87

Protein Annotations

Gene3D:3.80.10.10	MapMan:35.1	UniProt:A0A078HWA1	EnsemblPlants:CDY42760	ProteinID:CDY42760	ProteinID:CDY42760.1
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:GSBRNA2T00075307001	InterPro:IPR001611	InterPro:IPR032675
InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	PFAM:PF13855	PFscan:PS51450	PANTHER:PTHR44997
SMART:SM00364	SMART:SM00369	SUPFAM:SSF52058	UniParc:UPI0004EE8174	SEG:seg	:

Description

BnaA03g47790DBnaA03g47790D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HWA1]

Coordinates

chrLK032533:-:172600..176320

Molecular Weight (calculated)

43670.1 Da

IEP (calculated)

9.895

GRAVY (calculated)

-0.241

Length

395 amino acids

Sequence
(BLAST)

001: MMGYEQMNQM TMTTTAMMKN FNKMGPINTP HKKITTKRSV SAIDGGAAVM AGEGDRRRNL KTLDLSGMSL ASLSASSINL ASISKLDLSN NNIQQIPESL
101: VARMLNLWAL DLHSNQLKTL PNSIGCLSKL KVLNVSGNNL QHLPKTIEDC RSLEELNANF NELTMLPDTI GFELTNLAKL SVNSNKLVVL PSSLSHLTSL
201: RVLDARLNRL GSLPDDLENL VNLQVLNVSQ NFQHLKELPY SVGLLISLVE LDVSYNGITV LPDSIGCLRR IQKLSLEGNP LVSPPFEVVE QGLEAVKLYM
301: SEKMTESYKE TPMKKKLWGI GKMVKYKTFN GLSSSPGRSP GRRTGGDHHG NERGGFINVS DYRQIDGIAS PRHVSLFNPR RLLSPFSAYF SPPRY

Best Arabidopsis Sequence Match ( AT4G26050.1 )
(BLAST)

001: MMGYEQMNQM TMTTTAMMKN YNKKGLINTP QKKMTRRSVS AIDGGAAATA KEGDRRQNIK TLDLSGMSLA SLSASSINLA SISKLDLSNN NIQKIPESLV
101: ARMLNLWALD LQSNQLKTLP NSIGCLSKLK FLNVSGNYLQ SLPKTIEDCR SLEELNANFN ELTRLPDAIG FELTNLTKLS VNSNKLVLLP NSVSYLTSLR
201: VLDARLNRLS SLPEDLENLV NLQVLNVSQN FQHLTTLPYS VGLLISLVEL DVSYNGITVL PDSLGCLRRI QKLSVEGNPL ISPPFEVVEQ GLEALKQYMS
301: EKMTESYKKT PTKKKSWGIG KLVKYGLSSS PGRSTGREDG KEGFINVSDY RQIDGIASPR HVSLFNPRRL LSPLSAYFSP PRY

Arabidopsis Description

PIRL8Plant intracellular Ras-group-related LRR protein 8 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWE5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.