CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY66405	Canola	cytosol	96.6	96.6
CDY30364	Canola	cytosol	84.8	82.97
CDY26809	Canola	nucleus	87.8	82.21
AT2G17440.1	Thale cress	cytosol	81.8	77.76
CDX72539	Canola	nucleus	53.2	67.68
CDX69142	Canola	cytosol	69.2	63.6
CDX75505	Canola	cytosol	68.4	63.33
CDY40632	Canola	nucleus	68.0	62.39
KRH28950	Soybean	cytosol	66.6	58.73
KRH76512	Soybean	nucleus	67.2	58.54
VIT_07s0031g02310.t01	Wine grape	cytosol	64.8	58.17
KRH39397	Soybean	nucleus	63.8	57.89
KRH07815	Soybean	cytosol	62.4	56.93
GSMUA_Achr5P23850_001	Banana	cytosol	61.8	56.08
GSMUA_Achr8P25490_001	Banana	nucleus	61.6	55.7
PGSC0003DMT400059678	Potato	nucleus	62.6	55.01
PGSC0003DMT400035497	Potato	cytosol	62.6	54.72
Solyc02g082350.2.1	Tomato	nucleus	62.8	54.42
Os08t0511700-00	Rice	plasma membrane	55.6	48.43
EES14257	Sorghum	nucleus	55.4	47.92
TraesCS7B01G143600.3	Wheat	nucleus	53.8	47.44
Zm00001d031470_P001	Maize	plasma membrane	54.2	46.97
TraesCS7D01G246700.1	Wheat	nucleus	52.8	46.32
TraesCS7A01G247900.2	Wheat	cytosol	52.8	46.32
CDY30187	Canola	nucleus	17.6	31.54
CDX73881	Canola	cytosol	25.4	29.53
CDY00732	Canola	cytosol	25.2	29.3
CDY69629	Canola	cytosol	19.0	27.94
CDY26604	Canola	cytosol	25.2	27.21
CDY16042	Canola	cytosol	25.2	27.21
CDY14024	Canola	mitochondrion	14.2	27.0
CDY40770	Canola	cytosol	14.2	26.89
CDY46713	Canola	nucleus	19.6	26.78
CDX78316	Canola	cytosol, mitochondrion, nucleus	14.0	26.72
CDX81078	Canola	mitochondrion	14.0	26.72
CDY48988	Canola	cytosol	25.2	26.64
CDX89369	Canola	cytosol, plastid	21.2	26.63
CDX70122	Canola	cytosol	25.6	26.5
CDX98871	Canola	cytosol	25.6	26.5
CDX94383	Canola	cytosol	21.0	26.38
CDY42760	Canola	cytosol, plastid	20.6	26.08
CDX82667	Canola	nucleus, plastid	20.0	26.04
CDY39144	Canola	nucleus, plastid	20.0	26.04
CDY01012	Canola	plastid	24.8	25.94
CDY08535	Canola	plastid	25.6	25.75
CDX92748	Canola	cytosol, plasma membrane, plastid	18.6	24.87
GSMUA_Achr6P03430_001	Banana	nucleus	21.4	22.67
CDX97851	Canola	cytosol	13.6	18.73
CDY29703	Canola	cytosol	13.6	18.73
CDY56828	Canola	nucleus	18.6	15.9
CDX97667	Canola	nucleus	18.2	15.56

Protein Annotations

Gene3D:3.80.10.10	MapMan:35.1	UniProt:A0A078F7X8	EnsemblPlants:CDY07843	ProteinID:CDY07843	ProteinID:CDY07843.1
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:GSBRNA2T00125001001	InterPro:IPR001611	InterPro:IPR032675
InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	PFAM:PF00560	PFAM:PF13855	PRINTS:PR00019
PFscan:PS51450	PANTHER:PTHR44513	PANTHER:PTHR44513:SF1	SMART:SM00364	SMART:SM00365	SMART:SM00369
SUPFAM:SSF52058	UniParc:UPI0004EE8CFC	SEG:seg	:	:	:

Description

BnaC03g47790DBnaC03g47790D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F7X8]

Coordinates

chrLK031981:-:450268..452435

Molecular Weight (calculated)

55654.1 Da

IEP (calculated)

5.573

GRAVY (calculated)

-0.256

Length

500 amino acids

Sequence
(BLAST)

001: MDKRLDSMNQ VVEEIMRIHR SLPSRPEIDD VEAATSLIQN VEKDDQNRLD AIDRQVKSSE VPRELFDVLR EMKRGLVRFQ SKEQKIEAAK VLDLESAHVL
101: FDELIQRASN CIASPPSSNV TTAKEPAPAP VKSSLHSDSF LAPRKPLDST LEAKKLNGHD GEKMSLIKLA TLIEVSAKKG TQELNLQHKL MDSLEWLPDS
201: VGKLLSLVRL DLSENCIMAL PETIGGLLSL TMLDLHSNRI SQLPESIGDL LNLVNLNLSG NQLTSLPSSF SRLINLEELD LSSNSLSVLP ESISSLVSLK
301: KLDVETNNIE EIPHSISGCS SLKELRADYN RLKALPGAVG KIATLEILSI RYNNIRQLPT TMSSMANLKE LDVSFNELES VPESLCYATT LVKLNIGNNF
401: ANLRSLPGLI GNLEKLEELD MSNNQIRFLP FSFKALSQLR VLHTQQNPLE ELPRDVIQKG AQAVVQYMNE LVEARNTKSQ STKQKKSWVD SICFLCKSTN

Best Arabidopsis Sequence Match ( AT2G17440.1 )
(BLAST)

001: MDSKEMVVEE IMRIHRSLPL RPEIDDVETA TSLIQNVEKE DRNRLEAIDK LVKTSSSEVP LELFNVFKEM KKSLVRFQST EQTREATKIL DLESVHVVFD
101: ELIQRASFCI ASPNSTTALP RSVPVPAPVV SSDEIPFKSK EIISRDDTFV KKAKSSFYSD GLLAPSKPQV LDSTLHQAKN VAGNDGEKLS LIKLASLIEV
201: SAKKATQELN LQHRLMDQLE WLPDSLGKLS SLVRLDLSEN CIMVLPATIG GLISLTRLDL HSNRIGQLPE SIGDLLNLVN LNLSGNQLSS LPSSFNRLIH
301: LEELDLSSNS LSILPESIGS LVSLKKLDVE TNNIEEIPHS ISGCSSMEEL RADYNRLKAL PEAVGKLSTL EILTVRYNNI RQLPTTMSSM ANLKELDVSF
401: NELESVPESL CYAKTLVKLN IGNNFANLRS LPGLIGNLEK LEELDMSNNQ IRFLPYSFKT LSNLRVLQTE QNPLEELPRD ITEKGAQAVV QYMNDLVEAR
501: NTKSQRTKPK KSWVNSICFF CKSSTN

Arabidopsis Description

PIRL5Plant intracellular Ras-group-related LRR protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q5G5E0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.