Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY26604 | Canola | cytosol | 98.49 | 98.49 |
| AT1G12970.1 | Thale cress | cytosol | 82.94 | 82.76 |
| CDY69629 | Canola | cytosol | 48.16 | 65.59 |
| CDY48988 | Canola | cytosol | 63.71 | 62.37 |
| KRH74520 | Soybean | cytosol | 53.35 | 53.58 |
| GSMUA_Achr1P13500_001 | Banana | plastid | 51.4 | 48.67 |
| CDY00732 | Canola | cytosol | 45.14 | 48.6 |
| CDX73881 | Canola | cytosol | 44.92 | 48.37 |
| HORVU7Hr1G066320.3 | Barley | cytosol | 29.16 | 48.21 |
| CDX70122 | Canola | cytosol | 47.52 | 45.55 |
| CDX98871 | Canola | cytosol | 47.52 | 45.55 |
| CDY01012 | Canola | plastid | 46.87 | 45.4 |
| GSMUA_Achr8P28520_001 | Banana | cytosol, nucleus, plastid | 48.38 | 44.71 |
| CDY08535 | Canola | plastid | 46.87 | 43.66 |
| TraesCS6D01G191800.1 | Wheat | plastid | 46.22 | 43.41 |
| TraesCS2A01G327100.1 | Wheat | cytosol, plastid | 47.08 | 43.34 |
| TraesCS2B01G354900.1 | Wheat | plastid | 46.87 | 43.23 |
| TraesCS2D01G335800.1 | Wheat | cytosol, plastid | 46.87 | 43.23 |
| HORVU2Hr1G082540.6 | Barley | cytosol, mitochondrion | 37.58 | 42.44 |
| EES05350 | Sorghum | plastid | 46.0 | 42.35 |
| Os02t0593600-01 | Rice | plasma membrane | 45.57 | 42.12 |
| Zm00001d025681_P001 | Maize | plasma membrane | 45.14 | 41.63 |
| EES10994 | Sorghum | plastid | 45.57 | 41.29 |
| Zm00001d017071_P002 | Maize | plastid | 46.65 | 40.83 |
| HORVU6Hr1G053210.1 | Barley | cytosol, plastid | 45.14 | 40.5 |
| CDY30187 | Canola | nucleus | 22.89 | 37.99 |
| CDY46713 | Canola | nucleus | 25.49 | 32.24 |
| CDX82667 | Canola | nucleus, plastid | 26.35 | 31.77 |
| CDY39144 | Canola | nucleus, plastid | 26.35 | 31.77 |
| CDY42760 | Canola | cytosol, plastid | 26.13 | 30.63 |
| CDX89369 | Canola | cytosol, plastid | 25.27 | 29.4 |
| CDX94383 | Canola | cytosol | 25.05 | 29.15 |
| CDX92748 | Canola | cytosol, plasma membrane, plastid | 23.54 | 29.14 |
| CDX72539 | Canola | nucleus | 24.41 | 28.75 |
| CDX81078 | Canola | mitochondrion | 15.33 | 27.1 |
| CDY14024 | Canola | mitochondrion | 15.33 | 27.0 |
| CDX78316 | Canola | cytosol, mitochondrion, nucleus | 15.12 | 26.72 |
| CDY40770 | Canola | cytosol | 15.12 | 26.52 |
| CDY07843 | Canola | nucleus | 27.21 | 25.2 |
| CDY66405 | Canola | cytosol | 27.0 | 25.0 |
| CDY30364 | Canola | cytosol | 27.0 | 24.46 |
| CDX75505 | Canola | cytosol | 27.86 | 23.89 |
| CDX69142 | Canola | cytosol | 27.86 | 23.71 |
| CDY26809 | Canola | nucleus | 27.0 | 23.41 |
| CDY40632 | Canola | nucleus | 27.21 | 23.12 |
| CDX97851 | Canola | cytosol | 16.41 | 20.94 |
| CDY29703 | Canola | cytosol | 16.2 | 20.66 |
| CDX97667 | Canola | nucleus | 20.73 | 16.41 |
| CDY56828 | Canola | nucleus | 20.3 | 16.07 |
Protein Annotations
| Gene3D:3.80.10.10 | MapMan:35.1 | UniProt:A0A078FT91 | EnsemblPlants:CDY16042 | ProteinID:CDY16042 | ProteinID:CDY16042.1 |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | EnsemblPlantsGene:GSBRNA2T00090436001 | InterPro:IPR001611 |
| InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt | InterPro:Leu-rich_rpt_typical-subtyp | PFAM:PF13855 | PFscan:PS51450 |
| PANTHER:PTHR44373 | PANTHER:PTHR44373:SF1 | SMART:SM00364 | SMART:SM00369 | SUPFAM:SSF52058 | UniParc:UPI0004EF2E0D |
| SEG:seg | : | : | : | : | : |
Description
BnaC08g40810DBnaC08g40810D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FT91]
Coordinates
chrLK032060:+:305154..307141
Molecular Weight (calculated)
51530.1 Da
IEP (calculated)
4.390
GRAVY (calculated)
-0.290
Length
463 amino acids
Sequence
(BLAST)
(BLAST)
001: MDHDLEIFPL LSYALHHSDP ASHAPPSLSI QHSLANRYPL LTNPHVISTL IESIPSTITQ TLHVFTSLGP RPDPSSVSSA RAKIAQIRET DPSSLSTEDA
101: AKEEQIYVTV VKLEEVHEGY EKQLRDLEEK LSEVYDSAVE SLDGGDEVNE EVLEILNGGG VERIDLSDRR LKLLPEALGN NVSLVSLNLS RNDLKLLPDT
201: ISGLEKLEEL DVSSNLLESL PDSFGLLLNL RVLNVSGNKL TYLPESITQC RSLVELDASF NNLASLPANI GYGLLNLERL SIHLNKLRFF PNSICEMRSL
301: RYLDAHMNEI HGLPIAIGRL TSLEVLNLSS NFSDLTELPD TISDLANLKE LDVSNNQIRV LPDSFFRLEK LEKLNLDQNP LEFPPQEMVN QGAEGVREYM
401: RKRWEEMVEE EQMRSVIEAE KQQGGVTGWL SWGSSIVSNL LSGGTQSGGA NKPKEDSYMD QLL
101: AKEEQIYVTV VKLEEVHEGY EKQLRDLEEK LSEVYDSAVE SLDGGDEVNE EVLEILNGGG VERIDLSDRR LKLLPEALGN NVSLVSLNLS RNDLKLLPDT
201: ISGLEKLEEL DVSSNLLESL PDSFGLLLNL RVLNVSGNKL TYLPESITQC RSLVELDASF NNLASLPANI GYGLLNLERL SIHLNKLRFF PNSICEMRSL
301: RYLDAHMNEI HGLPIAIGRL TSLEVLNLSS NFSDLTELPD TISDLANLKE LDVSNNQIRV LPDSFFRLEK LEKLNLDQNP LEFPPQEMVN QGAEGVREYM
401: RKRWEEMVEE EQMRSVIEAE KQQGGVTGWL SWGSSIVSNL LSGGTQSGGA NKPKEDSYMD QLL
001: MDHDLEIFPL LSYVLHHSDP ASHAPPSLAI QQSLANRYPL LTNPYVISSL IESIPSTITQ TLFVFGSLGP RPDPLAVSSA RSKIREIKEN DSLSPEDAAK
101: EEQVYAAVVS LEEVHEGYEK QLRDLEEEIG RVYASAVESL SGGDEVNEEV LAVIKDAEDG GVVERIDLSD HELKLLPDAL GKIVGLVSLN VSRNNLRFLP
201: DTISGLEKLE ELDLSSNRLV FLPDSIGLLL NLRILNVTGN KLTLLPESIA QCRSLVELDA SFNNLTSLPA NFGYGLLNLE RLSIQLNKIR FFPNSICEMR
301: SLRYLDAHMN EIHGLPIAIG RLTNLEVMNL SSNFSDLIEL PDTISDLANL RELDLSNNQI RVLPDSFFRL EKLEKLNLDQ NPLEYPPQEM VNQSAEAVRE
401: FMRKRWEEMV EEEQLRSVIE AEKQQGGATG WLSWGSSIVT SLFSGGTHGG AAKKPKNSFL DEQL
101: EEQVYAAVVS LEEVHEGYEK QLRDLEEEIG RVYASAVESL SGGDEVNEEV LAVIKDAEDG GVVERIDLSD HELKLLPDAL GKIVGLVSLN VSRNNLRFLP
201: DTISGLEKLE ELDLSSNRLV FLPDSIGLLL NLRILNVTGN KLTLLPESIA QCRSLVELDA SFNNLTSLPA NFGYGLLNLE RLSIQLNKIR FFPNSICEMR
301: SLRYLDAHMN EIHGLPIAIG RLTNLEVMNL SSNFSDLIEL PDTISDLANL RELDLSNNQI RVLPDSFFRL EKLEKLNLDQ NPLEYPPQEM VNQSAEAVRE
401: FMRKRWEEMV EEEQLRSVIE AEKQQGGATG WLSWGSSIVT SLFSGGTHGG AAKKPKNSFL DEQL
Arabidopsis Description
PIRL3Plant intracellular Ras-group-related LRR protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8W4Q3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.