Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY26604 | Canola | cytosol | 82.76 | 82.94 |
| CDY16042 | Canola | cytosol | 82.76 | 82.94 |
| Bra026944.1-P | Field mustard | cytosol | 82.76 | 82.94 |
| AT3G26500.1 | Thale cress | cytosol | 67.67 | 66.67 |
| KRH74520 | Soybean | cytosol | 54.09 | 54.45 |
| GSMUA_Achr1P13500_001 | Banana | plastid | 52.37 | 49.69 |
| HORVU7Hr1G066320.3 | Barley | cytosol | 28.88 | 47.86 |
| GSMUA_Achr8P28520_001 | Banana | cytosol, nucleus, plastid | 48.49 | 44.91 |
| AT5G05850.1 | Thale cress | plastid | 47.2 | 43.28 |
| TraesCS2A01G327100.1 | Wheat | cytosol, plastid | 46.77 | 43.14 |
| TraesCS2B01G354900.1 | Wheat | plastid | 46.55 | 43.03 |
| TraesCS2D01G335800.1 | Wheat | cytosol, plastid | 46.55 | 43.03 |
| EES05350 | Sorghum | plastid | 46.55 | 42.94 |
| TraesCS6D01G191800.1 | Wheat | plastid | 45.47 | 42.8 |
| Os02t0593600-01 | Rice | plasma membrane | 46.12 | 42.71 |
| AT3G11330.1 | Thale cress | plastid | 45.91 | 42.69 |
| HORVU2Hr1G082540.6 | Barley | cytosol, mitochondrion | 37.5 | 42.44 |
| Zm00001d025681_P001 | Maize | plasma membrane | 45.91 | 42.43 |
| EES10994 | Sorghum | plastid | 46.12 | 41.88 |
| Zm00001d017071_P002 | Maize | plastid | 46.98 | 41.21 |
| HORVU6Hr1G053210.1 | Barley | cytosol, plastid | 45.26 | 40.7 |
| AT4G29880.1 | Thale cress | nucleus | 24.35 | 30.29 |
| AT4G26050.1 | Thale cress | cytosol | 25.0 | 30.29 |
| AT2G19330.1 | Thale cress | nucleus, plastid | 23.92 | 29.21 |
| AT5G07910.1 | Thale cress | cytosol | 14.66 | 25.95 |
| AT2G17440.1 | Thale cress | cytosol | 26.29 | 23.19 |
| AT4G35470.1 | Thale cress | nucleus | 26.72 | 22.59 |
| AT2G30105.1 | Thale cress | cytosol | 17.46 | 21.66 |
| AT3G15410.2 | Thale cress | cytosol, mitochondrion, nucleus | 20.04 | 15.76 |
Protein Annotations
| Gene3D:3.80.10.10 | MapMan:35.1 | EntrezGene:837855 | ProteinID:AAF78502.1 | ProteinID:AEE28955.1 | ArrayExpress:AT1G12970 |
| EnsemblPlantsGene:AT1G12970 | RefSeq:AT1G12970 | TAIR:AT1G12970 | RefSeq:AT1G12970-TAIR-G | EnsemblPlants:AT1G12970.1 | TAIR:AT1G12970.1 |
| EMBL:AY062103 | EMBL:AY124880 | EMBL:AY849573 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006464 | GO:GO:0007275 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016740 | GO:GO:0019538 | GO:GO:0046777 |
| GO:GO:0055046 | InterPro:IPR001611 | InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt | InterPro:Leu-rich_rpt_typical-subtyp |
| RefSeq:NP_563921.1 | PFAM:PF00560 | PFAM:PF13855 | Symbol:PIRL3 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020090 | PO:PO:0020100 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PRINTS:PR00019 |
| PFscan:PS51450 | PANTHER:PTHR44373 | PANTHER:PTHR44373:SF1 | UniProt:Q8W4Q3 | SMART:SM00364 | SMART:SM00369 |
| SUPFAM:SSF52058 | UniParc:UPI00000AAFCB | : | : | : | : |
Description
PIRL3Plant intracellular Ras-group-related LRR protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8W4Q3]
Coordinates
chr1:+:4423540..4425936
Molecular Weight (calculated)
51650.5 Da
IEP (calculated)
4.413
GRAVY (calculated)
-0.186
Length
464 amino acids
Sequence
(BLAST)
(BLAST)
001: MDHDLEIFPL LSYVLHHSDP ASHAPPSLAI QQSLANRYPL LTNPYVISSL IESIPSTITQ TLFVFGSLGP RPDPLAVSSA RSKIREIKEN DSLSPEDAAK
101: EEQVYAAVVS LEEVHEGYEK QLRDLEEEIG RVYASAVESL SGGDEVNEEV LAVIKDAEDG GVVERIDLSD HELKLLPDAL GKIVGLVSLN VSRNNLRFLP
201: DTISGLEKLE ELDLSSNRLV FLPDSIGLLL NLRILNVTGN KLTLLPESIA QCRSLVELDA SFNNLTSLPA NFGYGLLNLE RLSIQLNKIR FFPNSICEMR
301: SLRYLDAHMN EIHGLPIAIG RLTNLEVMNL SSNFSDLIEL PDTISDLANL RELDLSNNQI RVLPDSFFRL EKLEKLNLDQ NPLEYPPQEM VNQSAEAVRE
401: FMRKRWEEMV EEEQLRSVIE AEKQQGGATG WLSWGSSIVT SLFSGGTHGG AAKKPKNSFL DEQL
101: EEQVYAAVVS LEEVHEGYEK QLRDLEEEIG RVYASAVESL SGGDEVNEEV LAVIKDAEDG GVVERIDLSD HELKLLPDAL GKIVGLVSLN VSRNNLRFLP
201: DTISGLEKLE ELDLSSNRLV FLPDSIGLLL NLRILNVTGN KLTLLPESIA QCRSLVELDA SFNNLTSLPA NFGYGLLNLE RLSIQLNKIR FFPNSICEMR
301: SLRYLDAHMN EIHGLPIAIG RLTNLEVMNL SSNFSDLIEL PDTISDLANL RELDLSNNQI RVLPDSFFRL EKLEKLNLDQ NPLEYPPQEM VNQSAEAVRE
401: FMRKRWEEMV EEEQLRSVIE AEKQQGGATG WLSWGSSIVT SLFSGGTHGG AAKKPKNSFL DEQL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.