Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra024119.1-P | Field mustard | cytosol | 86.86 | 88.52 |
| CDY46713 | Canola | nucleus | 86.6 | 88.25 |
| CDY30187 | Canola | nucleus | 65.68 | 87.81 |
| AT2G19330.1 | Thale cress | nucleus, plastid | 80.97 | 79.47 |
| VIT_11s0052g00390.t01 | Wine grape | cytosol | 55.23 | 66.88 |
| KRH02753 | Soybean | cytosol | 62.47 | 64.72 |
| KRH37361 | Soybean | cytosol | 57.91 | 60.85 |
| KRH12356 | Soybean | cytosol | 57.1 | 58.68 |
| GSMUA_AchrUn_... | Banana | nucleus | 53.08 | 58.24 |
| PGSC0003DMT400016538 | Potato | mitochondrion | 56.57 | 58.13 |
| GSMUA_Achr1P23570_001 | Banana | nucleus | 53.08 | 57.73 |
| Solyc12g017480.1.1 | Tomato | cytosol | 55.23 | 56.59 |
| AT4G26050.1 | Thale cress | cytosol | 56.57 | 55.09 |
| Zm00001d002399_P001 | Maize | nucleus | 36.73 | 54.58 |
| Os04t0605300-01 | Rice | nucleus | 49.6 | 52.56 |
| Zm00001d002402_P001 | Maize | cytosol, nucleus, plastid | 50.4 | 51.79 |
| KXG27059 | Sorghum | cytosol, nucleus, plastid | 50.13 | 51.52 |
| TraesCS2A01G432800.1 | Wheat | cytosol, nucleus, plastid | 49.33 | 50.41 |
| TraesCS2D01G430800.1 | Wheat | cytosol, nucleus, plastid | 48.79 | 50.28 |
| TraesCS2B01G454100.1 | Wheat | cytosol, nucleus, plastid | 48.53 | 50.0 |
| HORVU2Hr1G101090.6 | Barley | plastid | 49.87 | 44.08 |
| AT3G11330.1 | Thale cress | plastid | 34.32 | 25.65 |
| AT5G05850.1 | Thale cress | plastid | 34.05 | 25.1 |
| AT1G12970.1 | Thale cress | cytosol | 30.29 | 24.35 |
| AT3G26500.1 | Thale cress | cytosol | 28.42 | 22.51 |
| AT5G07910.1 | Thale cress | cytosol | 15.01 | 21.37 |
| AT2G17440.1 | Thale cress | cytosol | 26.81 | 19.01 |
| AT4G35470.1 | Thale cress | nucleus | 27.61 | 18.76 |
| AT2G30105.1 | Thale cress | cytosol | 15.82 | 15.78 |
| AT3G15410.2 | Thale cress | cytosol, mitochondrion, nucleus | 24.13 | 15.25 |
Protein Annotations
| Gene3D:3.80.10.10 | MapMan:35.1 | EntrezGene:829110 | UniProt:A0A178UXC0 | ProteinID:AEE85688.1 | ArrayExpress:AT4G29880 |
| EnsemblPlantsGene:AT4G29880 | RefSeq:AT4G29880 | TAIR:AT4G29880 | RefSeq:AT4G29880-TAIR-G | EnsemblPlants:AT4G29880.1 | TAIR:AT4G29880.1 |
| EMBL:AY849577 | ProteinID:CAB43663.1 | ProteinID:CAB79746.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR001611 | InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt | InterPro:Leu-rich_rpt_typical-subtyp | RefSeq:NP_194717.2 |
| ProteinID:OAO98263.1 | PFAM:PF13855 | Symbol:PIRL7 | PO:PO:0000293 | PFscan:PS51450 | PANTHER:PTHR44997 |
| UniProt:Q5G5D8 | SMART:SM00364 | SMART:SM00369 | SUPFAM:SSF52058 | UniParc:UPI00004C5BB6 | SEG:seg |
Description
PIRL7PIRL7 [Source:UniProtKB/TrEMBL;Acc:A0A178UXC0]
Coordinates
chr4:-:14606926..14608478
Molecular Weight (calculated)
41992.5 Da
IEP (calculated)
8.918
GRAVY (calculated)
-0.140
Length
373 amino acids
Sequence
(BLAST)
(BLAST)
001: MICEDAYQYQ QLHGQKDHMM TMMMMDLSTS PPSSPLSPSL SPKSPSYNNN EEERLEVVNL SGMALQSLPN PSLNLANICK LDLSNNHIKK IPESLTARLL
101: NLIALDIHSN QIKALPNSIG CLSKLKILNV SGNFLVSLPQ TIQNCRSLEE LNANFNELIR LPDNIGLELT NLKKLCVNSN KLISLPATIT CLTSLRVLDA
201: RLNCLMILPE DLENLINLEI LNVSQNFQYL SALPSSIGLL LNLLELDISY NKITVLPESI GCMRRLRKLS AEGNPLVSPP IEVVEQSLHA VREYLSQKMN
301: GKLVNTAAKK KTWGFRKLVK YGTFNGRSRV WTREEREGLI MPEYRPIDIL TSTKFPVTCS PRRLFSPRTY FSR
101: NLIALDIHSN QIKALPNSIG CLSKLKILNV SGNFLVSLPQ TIQNCRSLEE LNANFNELIR LPDNIGLELT NLKKLCVNSN KLISLPATIT CLTSLRVLDA
201: RLNCLMILPE DLENLINLEI LNVSQNFQYL SALPSSIGLL LNLLELDISY NKITVLPESI GCMRRLRKLS AEGNPLVSPP IEVVEQSLHA VREYLSQKMN
301: GKLVNTAAKK KTWGFRKLVK YGTFNGRSRV WTREEREGLI MPEYRPIDIL TSTKFPVTCS PRRLFSPRTY FSR
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.