Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra019126.1-P | Field mustard | cytosol, plastid | 88.77 | 86.08 |
| CDY42760 | Canola | cytosol, plastid | 88.51 | 85.82 |
| Bra013944.1-P | Field mustard | cytosol, plastid | 88.25 | 84.92 |
| CDX89369 | Canola | cytosol, plastid | 87.99 | 84.67 |
| CDX94383 | Canola | cytosol | 87.47 | 84.17 |
| CDX92748 | Canola | cytosol, plasma membrane, plastid | 79.63 | 81.55 |
| VIT_11s0052g00390.t01 | Wine grape | cytosol | 55.61 | 69.16 |
| KRH02753 | Soybean | cytosol | 56.66 | 60.28 |
| PGSC0003DMT400016538 | Potato | mitochondrion | 56.14 | 59.23 |
| KRH37361 | Soybean | cytosol | 54.57 | 58.87 |
| GSMUA_AchrUn_... | Banana | nucleus | 51.96 | 58.53 |
| Solyc12g017480.1.1 | Tomato | cytosol | 55.09 | 57.97 |
| GSMUA_Achr1P23570_001 | Banana | nucleus | 51.44 | 57.43 |
| AT4G29880.1 | Thale cress | nucleus | 55.09 | 56.57 |
| KRH12356 | Soybean | cytosol | 53.26 | 56.2 |
| AT2G19330.1 | Thale cress | nucleus, plastid | 55.61 | 56.05 |
| Os04t0605300-01 | Rice | nucleus | 50.39 | 54.83 |
| TraesCS2D01G430800.1 | Wheat | cytosol, nucleus, plastid | 50.13 | 53.04 |
| Zm00001d002399_P001 | Maize | nucleus | 34.73 | 52.99 |
| Zm00001d002402_P001 | Maize | cytosol, nucleus, plastid | 50.13 | 52.89 |
| KXG27059 | Sorghum | cytosol, nucleus, plastid | 50.13 | 52.89 |
| TraesCS2B01G454100.1 | Wheat | cytosol, nucleus, plastid | 49.87 | 52.76 |
| TraesCS2A01G432800.1 | Wheat | cytosol, nucleus, plastid | 50.13 | 52.6 |
| HORVU2Hr1G101090.6 | Barley | plastid | 51.44 | 46.68 |
| AT3G11330.1 | Thale cress | plastid | 33.42 | 25.65 |
| AT5G05850.1 | Thale cress | plastid | 33.68 | 25.49 |
| AT1G12970.1 | Thale cress | cytosol | 30.29 | 25.0 |
| AT5G07910.1 | Thale cress | cytosol | 15.93 | 23.28 |
| AT3G26500.1 | Thale cress | cytosol | 27.15 | 22.08 |
| AT2G17440.1 | Thale cress | cytosol | 27.42 | 19.96 |
| AT4G35470.1 | Thale cress | nucleus | 28.2 | 19.67 |
| AT2G30105.1 | Thale cress | cytosol | 15.4 | 15.78 |
| AT3G15410.2 | Thale cress | cytosol, mitochondrion, nucleus | 24.02 | 15.59 |
Protein Annotations
| Gene3D:3.80.10.10 | MapMan:35.1 | EntrezGene:828711 | ProteinID:AEE85149.1 | ArrayExpress:AT4G26050 | EnsemblPlantsGene:AT4G26050 |
| RefSeq:AT4G26050 | TAIR:AT4G26050 | RefSeq:AT4G26050-TAIR-G | EnsemblPlants:AT4G26050.1 | TAIR:AT4G26050.1 | EMBL:AY093142 |
| EMBL:AY849578 | EMBL:BT008469 | ProteinID:CAB39670.1 | ProteinID:CAB79460.1 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0008150 | InterPro:IPR001611 | InterPro:IPR032675 | InterPro:LRR_dom_sf |
| InterPro:Leu-rich_rpt | InterPro:Leu-rich_rpt_typical-subtyp | RefSeq:NP_194335.2 | PFAM:PF13855 | Symbol:PIRL8 | PFscan:PS51450 |
| PANTHER:PTHR44997 | UniProt:Q8RWE5 | SMART:SM00364 | SMART:SM00369 | SUPFAM:SSF52058 | UniParc:UPI00000A4961 |
| SEG:seg | : | : | : | : | : |
Description
PIRL8Plant intracellular Ras-group-related LRR protein 8 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWE5]
Coordinates
chr4:+:13210230..13213477
Molecular Weight (calculated)
42442.5 Da
IEP (calculated)
9.943
GRAVY (calculated)
-0.264
Length
383 amino acids
Sequence
(BLAST)
(BLAST)
001: MMGYEQMNQM TMTTTAMMKN YNKKGLINTP QKKMTRRSVS AIDGGAAATA KEGDRRQNIK TLDLSGMSLA SLSASSINLA SISKLDLSNN NIQKIPESLV
101: ARMLNLWALD LQSNQLKTLP NSIGCLSKLK FLNVSGNYLQ SLPKTIEDCR SLEELNANFN ELTRLPDAIG FELTNLTKLS VNSNKLVLLP NSVSYLTSLR
201: VLDARLNRLS SLPEDLENLV NLQVLNVSQN FQHLTTLPYS VGLLISLVEL DVSYNGITVL PDSLGCLRRI QKLSVEGNPL ISPPFEVVEQ GLEALKQYMS
301: EKMTESYKKT PTKKKSWGIG KLVKYGLSSS PGRSTGREDG KEGFINVSDY RQIDGIASPR HVSLFNPRRL LSPLSAYFSP PRY
101: ARMLNLWALD LQSNQLKTLP NSIGCLSKLK FLNVSGNYLQ SLPKTIEDCR SLEELNANFN ELTRLPDAIG FELTNLTKLS VNSNKLVLLP NSVSYLTSLR
201: VLDARLNRLS SLPEDLENLV NLQVLNVSQN FQHLTTLPYS VGLLISLVEL DVSYNGITVL PDSLGCLRRI QKLSVEGNPL ISPPFEVVEQ GLEALKQYMS
301: EKMTESYKKT PTKKKSWGIG KLVKYGLSSS PGRSTGREDG KEGFINVSDY RQIDGIASPR HVSLFNPRRL LSPLSAYFSP PRY
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.