Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX72539 | Canola | nucleus | 62.48 | 87.28 |
| CDY40632 | Canola | nucleus | 83.06 | 83.67 |
| Bra017712.1-P | Field mustard | nucleus | 82.88 | 83.49 |
| CDX75505 | Canola | cytosol | 81.97 | 83.33 |
| CDX69142 | Canola | cytosol | 81.97 | 82.72 |
| Bra011617.1-P | Field mustard | cytosol | 65.57 | 78.77 |
| AT2G17440.1 | Thale cress | cytosol | 69.03 | 72.05 |
| KRH28950 | Soybean | cytosol | 68.67 | 66.49 |
| VIT_07s0031g02310.t01 | Wine grape | cytosol | 67.4 | 66.43 |
| KRH39397 | Soybean | nucleus | 65.76 | 65.52 |
| KRH76512 | Soybean | nucleus | 68.49 | 65.51 |
| KRH07815 | Soybean | cytosol | 64.85 | 64.96 |
| GSMUA_Achr5P23850_001 | Banana | cytosol | 63.02 | 62.79 |
| PGSC0003DMT400059678 | Potato | nucleus | 63.93 | 61.69 |
| GSMUA_Achr8P25490_001 | Banana | nucleus | 60.84 | 60.4 |
| PGSC0003DMT400035497 | Potato | cytosol | 62.11 | 59.62 |
| Solyc02g082350.2.1 | Tomato | nucleus | 61.2 | 58.23 |
| TraesCS7B01G143600.3 | Wheat | nucleus | 55.01 | 53.26 |
| Os08t0511700-00 | Rice | plasma membrane | 55.37 | 52.96 |
| EES14257 | Sorghum | nucleus | 55.37 | 52.6 |
| TraesCS7A01G247900.2 | Wheat | cytosol | 54.46 | 52.46 |
| TraesCS7D01G246700.1 | Wheat | nucleus | 54.46 | 52.46 |
| Zm00001d031470_P001 | Maize | plasma membrane | 54.64 | 51.99 |
| AT4G26050.1 | Thale cress | cytosol | 19.67 | 28.2 |
| AT5G07910.1 | Thale cress | cytosol | 13.3 | 27.86 |
| AT4G29880.1 | Thale cress | nucleus | 18.76 | 27.61 |
| AT3G11330.1 | Thale cress | plastid | 24.77 | 27.25 |
| AT2G19330.1 | Thale cress | nucleus, plastid | 18.58 | 26.84 |
| AT3G26500.1 | Thale cress | cytosol | 22.95 | 26.75 |
| AT1G12970.1 | Thale cress | cytosol | 22.59 | 26.72 |
| AT5G05850.1 | Thale cress | plastid | 24.04 | 26.09 |
| GSMUA_Achr6P03430_001 | Banana | nucleus | 21.13 | 24.58 |
| AT2G30105.1 | Thale cress | cytosol | 12.93 | 18.98 |
| AT3G15410.2 | Thale cress | cytosol, mitochondrion, nucleus | 18.58 | 17.29 |
Protein Annotations
| Gene3D:3.80.10.10 | MapMan:35.1 | EntrezGene:829699 | UniProt:A0A178UV21 | ProteinID:AEE86519.1 | ArrayExpress:AT4G35470 |
| EnsemblPlantsGene:AT4G35470 | RefSeq:AT4G35470 | TAIR:AT4G35470 | RefSeq:AT4G35470-TAIR-G | EnsemblPlants:AT4G35470.1 | TAIR:AT4G35470.1 |
| EMBL:AY072324 | EMBL:AY128730 | EMBL:AY849574 | Unigene:At.22486 | ProteinID:CAB54875.1 | ProteinID:CAB80263.1 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 |
| GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016020 | InterPro:IPR001611 |
| InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt | InterPro:Leu-rich_rpt_typical-subtyp | RefSeq:NP_195272.1 | ProteinID:OAO96692.1 |
| PFAM:PF13516 | PFAM:PF13855 | Symbol:PIRL4 | PO:PO:0000005 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PFscan:PS51450 | PANTHER:PTHR44513 |
| PANTHER:PTHR44513:SF1 | UniProt:Q9SVW8 | SMART:SM00364 | SMART:SM00369 | SUPFAM:SSF52058 | UniParc:UPI000009F185 |
| SEG:seg | : | : | : | : | : |
Description
PIRL4Plant intracellular Ras-group-related LRR protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SVW8]
Coordinates
chr4:+:16846138..16849183
Molecular Weight (calculated)
60998.5 Da
IEP (calculated)
5.346
GRAVY (calculated)
-0.265
Length
549 amino acids
Sequence
(BLAST)
(BLAST)
001: MDLMQMDKRL DSTEQVVEEI MRIHRSLPAR PGIDEVEAAK GLIDNVEKED QACLEAIARQ RKSSEVPGEL FMVLQEMKKG YVQFRSKEQI REALKLLDLE
101: SVHSLFDDFI QRASNCIASP SSNGSVSSRP PLPPATTTAA RSDSQSSLNF SERAPVRPKD MVSRDDSFVT KSKPSSLYSD GFAAPPRRPQ ILDSTLTTGN
201: DGEKLSLIKL ASLIEVSAKK ATQEINLQNK LTEQLEWLPD SLGKLSSLTS LDLSENHIVV LPNTIGGLSS LTKLDLHSNR IGQLPESIGE LLNLVYLNLG
301: SNQLSSLPSA FSRLVRLEEL DLSCNNLPIL PESIGSLVSL KKLDVETNDI EEIPYSIGGC SSLIELRADY NKLKALPEAI GKITTLEILS VRYNNIRQLP
401: TTMSSLASLK ELDVSFNELE SVPESLCFAT TLVKLNIGNN FADMVSLPRS IGNLEMLEEL DISNNQIRVL PDSFKMLTKL RVFRAQENPL HIPPRDIAEK
501: GPQAVVQYMN DLVETRNAKS LMVKPKKSWV QMCFFSKSNK RKQSSMEIV
101: SVHSLFDDFI QRASNCIASP SSNGSVSSRP PLPPATTTAA RSDSQSSLNF SERAPVRPKD MVSRDDSFVT KSKPSSLYSD GFAAPPRRPQ ILDSTLTTGN
201: DGEKLSLIKL ASLIEVSAKK ATQEINLQNK LTEQLEWLPD SLGKLSSLTS LDLSENHIVV LPNTIGGLSS LTKLDLHSNR IGQLPESIGE LLNLVYLNLG
301: SNQLSSLPSA FSRLVRLEEL DLSCNNLPIL PESIGSLVSL KKLDVETNDI EEIPYSIGGC SSLIELRADY NKLKALPEAI GKITTLEILS VRYNNIRQLP
401: TTMSSLASLK ELDVSFNELE SVPESLCFAT TLVKLNIGNN FADMVSLPRS IGNLEMLEEL DISNNQIRVL PDSFKMLTKL RVFRAQENPL HIPPRDIAEK
501: GPQAVVQYMN DLVETRNAKS LMVKPKKSWV QMCFFSKSNK RKQSSMEIV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.