Factsheet for Os02t0593600-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 5
cytosol 1
extracellular 1
nucleus 1

Predictors

GFP

MS/MS

Papers

plasma membrane: 28056797

msms PMID: 28056797 doi

N Yang, T Wang

Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES05350	Sorghum	plastid	73.25	72.96
TraesCS6D01G191800.1	Wheat	plastid	71.66	72.82
Zm00001d017071_P002	Maize	plastid	74.85	70.89
HORVU6Hr1G053210.1	Barley	cytosol, plastid	72.46	70.35
GSMUA_Achr1P13500_001	Banana	plastid	55.29	56.65
GSMUA_Achr8P28520_001	Banana	cytosol, nucleus, plastid	55.69	55.69
CDY00732	Canola	cytosol	46.51	54.19
CDX73881	Canola	cytosol	46.31	53.95
CDX70122	Canola	cytosol	50.9	52.8
CDX98871	Canola	cytosol	50.9	52.8
CDY01012	Canola	plastid	49.7	52.09
VIT_17s0000g09230.t01	Wine grape	cytosol	45.71	51.0
Bra009140.1-P	Field mustard	cytosol	51.1	50.79
Bra034849.1-P	Field mustard	plastid	50.1	50.5
CDY08535	Canola	plastid	50.1	50.5
AT5G05850.1	Thale cress	plastid	50.5	50.0
Bra001399.1-P	Field mustard	plastid	49.5	49.8
KRH63625	Soybean	nucleus	50.9	49.71
AT3G11330.1	Thale cress	plastid	49.5	49.7
KRH57134	Soybean	plastid	50.3	49.32
Solyc03g112270.2.1	Tomato	cytosol, nucleus, plastid	50.9	48.48
PGSC0003DMT400046655	Potato	cytosol	50.3	47.91
KRH74520	Soybean	cytosol	43.91	47.72
AT1G12970.1	Thale cress	cytosol	42.71	46.12
CDY16042	Canola	cytosol	42.12	45.57
CDY26604	Canola	cytosol	41.92	45.36
Bra026944.1-P	Field mustard	cytosol	41.92	45.36
CDY69629	Canola	cytosol	28.94	42.65
Bra032935.1-P	Field mustard	plastid	37.52	42.15
AT3G26500.1	Thale cress	cytosol	39.32	41.83
CDY48988	Canola	cytosol	38.52	40.8
Os04t0605300-01	Rice	nucleus	23.95	34.09
Os10t0572300-01	Rice	plasma membrane	27.94	25.78
Os08t0511700-00	Rice	plasma membrane	27.94	24.39
Os03t0212200-01	Rice	plasma membrane	6.39	22.54
Os02t0826600-01	Rice	cytosol	19.56	16.72

Protein Annotations

Gene3D:3.80.10.10	MapMan:35.1	EntrezGene:4329845	EMBL:AK069976	ProteinID:BAD16887.1	ProteinID:BAD34094.1
ProteinID:BAF09215.1	ProteinID:BAS79529.1	ProteinID:EAZ23646.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	EnsemblPlantsGene:Os02g0593600
EnsemblPlants:Os02t0593600-01	PFAM:PF13855	PFscan:PS51450	PANTHER:PTHR44373	PANTHER:PTHR44373:SF2	UniProt:Q6ZH85
SMART:SM00364	SMART:SM00369	SUPFAM:SSF52058	UniParc:UPI000035AD3E	RefSeq:XP_015625350.1	SEG:seg

Description

intracellular Ras-group-related LRR protein 2Leucine-rich repeat, typical subtype containing protein. (Os02t0593600-01)

Coordinates

chr2:+:22978830..22981452

Molecular Weight (calculated)

55210.8 Da

IEP (calculated)

5.444

GRAVY (calculated)

-0.349

Length

501 amino acids

Sequence
(BLAST)

001: MDPTPQSHPI LAYVLSRLPS LLPVSPSLST PRARDIEQPS PRAPSGAAEF DLVSRMPGLR HPSVLSAMTR AVADVSSARD ALRLLGPRPD HELVDSARAF
101: LRSHAAEEAE EEEEDEKVAK SREVVRLDEA HESYGGLLRE AEERLDRVYR TAMRGRDMQV VAAAHGGGGE EEAGVVDDEV VRVLRDAEEG KAVERLLLAD
201: RQLRHLPEQL GRIRGLLVLD VSRNQLKNVP DAIGGLEHLE ELRLASNALV SLPDSIGLLT SLKILDVSGN KLRSLPDSIS KCRSLVELDV SYNVLSYLPT
301: GIGQEMARLE KLWVHLNKLR SLPSSVCEMR SLRLLDAHFN QLRGLPAGIG RLAALESLNL SSNFSDMRDL PASFGDLLGL RELDLSNNQI HALPDCFGRL
401: QRLERLRLDQ NPLAVPPKEV VAGGVGAVKE YMARRWRDAR AEEERRGSAV AESPRVSTPK EWLVRSVSSL GSWVSDVTRY GAGQDKAAAE EEEDAYLQQN
501: L

Best Arabidopsis Sequence Match ( AT5G05850.1 )
(BLAST)

001: MATELNPKNF PVLSYVLDRL PSFTAKSSSS SDVEPPPSKS DPSSSSNHSI EIVTQMPHLA HPDVLASMTN ATADVSQTRS VLRTLGPRPD HETVDRARAR
101: LREIDASLSE SFEEIALSPN DIDVAEKEQK RREAVEQEKI WYKSILKLNE LHESYEKLLK EAEERLVRIY ESAEKNAAAV AEEEAAEVEV NEEVVSILQQ
201: AAENPLDRVD LSGRKLKLLP EAFGKIQGLL VLNLYNNQLQ AIPDSIAGLH NLLELDVSTN FLETLPDSIG LLSKLKILNV SCNKLTTLPD SICHCGSLVV
301: LDASYNNLTY LPTNIGFELV KLEKLLIHLN KIRSLPTSIG EMRSLRYLDA HFNELNGLPN SFGLLTNLEY LNLSSNFSDL QDLPASFGDL ISLQELDLSN
401: NQIHSLPDAF GTLVNLTKLN LDQNPLVVPP DEVVKQGVDA VKMYMGKRWV SMLEEEEKMA NMKDEMDQTN TDWLTRTTSK LKTYVTEVSE YLGSNPPRDP
501: YLDQQL

Arabidopsis Description

PIRL1Plant intracellular Ras-group-related LRR protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FFJ3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.