Factsheet for Bra034849.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra034850.1-P	Field mustard	nucleus	12.68	100.0
CDY08535	Canola	plastid	97.99	97.99
AT3G11330.1	Thale cress	plastid	82.5	82.16
Bra001399.1-P	Field mustard	plastid	81.69	81.53
Bra009140.1-P	Field mustard	cytosol	72.23	71.23
VIT_17s0000g09230.t01	Wine grape	cytosol	52.72	58.35
KRH63625	Soybean	nucleus	60.16	58.28
GSMUA_Achr1P13500_001	Banana	plastid	56.34	57.26
GSMUA_Achr8P28520_001	Banana	cytosol, nucleus, plastid	56.34	55.89
KRH57134	Soybean	plastid	56.54	54.99
Zm00001d025681_P001	Maize	plasma membrane	53.52	52.99
TraesCS6D01G191800.1	Wheat	plastid	51.51	51.93
PGSC0003DMT400046655	Potato	cytosol	54.73	51.71
TraesCS2B01G354900.1	Wheat	plastid	51.91	51.39
TraesCS2D01G335800.1	Wheat	cytosol, plastid	51.91	51.39
TraesCS2A01G327100.1	Wheat	cytosol, plastid	51.91	51.29
Solyc03g112270.2.1	Tomato	cytosol, nucleus, plastid	53.92	50.95
EES10994	Sorghum	plastid	52.31	50.88
HORVU6Hr1G053210.1	Barley	cytosol, plastid	52.11	50.19
Os02t0593600-01	Rice	plasma membrane	50.5	50.1
HORVU7Hr1G066320.3	Barley	cytosol	27.36	48.57
Bra026944.1-P	Field mustard	cytosol	44.27	47.52
Bra032935.1-P	Field mustard	plastid	42.05	46.86
EES05350	Sorghum	plastid	47.28	46.72
HORVU2Hr1G082540.6	Barley	cytosol, mitochondrion	37.63	45.61
Zm00001d017071_P002	Maize	plastid	48.09	45.18
Bra038857.1-P	Field mustard	nucleus, plastid	26.16	33.85
Bra019126.1-P	Field mustard	cytosol, plastid	26.56	33.42
Bra024119.1-P	Field mustard	cytosol	24.55	33.33
Bra013944.1-P	Field mustard	cytosol, plastid	26.36	32.91
Bra028680.1-P	Field mustard	cytosol	14.29	26.89
Bra011617.1-P	Field mustard	cytosol	23.94	26.04
Bra005960.1-P	Field mustard	cytosol, mitochondrion, nucleus	13.68	25.95
Bra024514.1-P	Field mustard	cytosol	25.55	25.4
Bra037271.1-P	Field mustard	cytosol	25.96	25.05
Bra017712.1-P	Field mustard	nucleus	25.96	23.67
Bra021606.1-P	Field mustard	cytosol	16.1	22.04
Bra027245.1-P	Field mustard	nucleus	18.91	16.07

Protein Annotations

Gene3D:3.80.10.10	MapMan:35.1	EnsemblPlantsGene:Bra034849	EnsemblPlants:Bra034849.1	EnsemblPlants:Bra034849.1-P	ncoils:Coil
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_dom_sf
InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	UniProt:M4F1A3	PFAM:PF13855	PRINTS:PR00019	PFscan:PS51450
PANTHER:PTHR44373	SMART:SM00364	SMART:SM00369	SUPFAM:SSF52058	UniParc:UPI000254773D	SEG:seg

Description

AT3G11330 (E=8e-181) | leucine-rich repeat family protein

Coordinates

chrA05:+:21712108..21714942

Molecular Weight (calculated)

55053.7 Da

IEP (calculated)

4.420

GRAVY (calculated)

-0.224

Length

497 amino acids

Sequence
(BLAST)

001: MAADPNPNKF PVLSYVLSRL PSFTATKSSS PSSSSSSAPA FDVEQPIEIV TQMPHLAHPS VLASMTKAIS DVAQTRSILR TLGPRPDHES VDKARAKLSE
101: IEGILSESLN DIAINEGKDE DEDEKKREEM GKDKTVCESI LKLDEVHDSY EKLLKEAEER LVRMYESAAV AADEEGVAAV EVNEEVVGIL QQALDNRVER
201: VDLSGRKLRL LPEAFGRIQG LLVLDLSNNQ LQAIPDSIAG LHDLVELNVS GNILETLPDS IGLLSKLKIL NVSTNKLTVL PDSICRCGSL VILDVSFNRL
301: TYLPTNIGSE LVNLEKLMIQ YNKIRSFPSS IGEMISLTYL DAHFNELQGL PDSFCLLANL EYLNLSSNFS DLIELPISFG DLINLQELDL SNNQIHALPD
401: TFGSLESLTK LNVSQNPLVV PPEEVVKEGA EVVKMYMGKR RISMFEEEEK RKMEEEMEQA NAGWLTRTTS KLKTYVTDVS EYLGSGSPRD SYLEQKL

Best Arabidopsis Sequence Match ( AT3G11330.1 )
(BLAST)

001: MAAEPNPKNF PVLSYVLARL PSFTAKSPSS SVPPFDIEQP PPSSSSSSIE IVTQMPHLTQ PDVLASMTSA ISDVAETRSI LRTLGPRPDH ESVDKARAKL
101: SEIESFLSES FEDIALTDAA AKDEKRRQEM DQEKTWCESI LKLDEVHASY EKLLKEAEER LVRIYESAEK NAAEDEENVA AVEVNEEVVG ILQHASANPV
201: DRVDLSGRKL RLLPEAFGRI QGLLVLNLSN NKLESIPDSI AGLHSLVELD VSTNSLETLP DSIGLLSKLK ILNVSTNKLT SLPDSICRCG SLVILDVSFN
301: RLTYLPTNIG PELVNLEKLL VQYNKIRSFP TSIGEMRSLK HLDAHFNELN GLPDSFVLLT NLEYLNLSSN FSDLKDLPFS FGELISLQEL DLSNNQIHAL
401: PDTFGTLDSL TKLNVDQNPL VVPPEEVVKE GVEAVKTYMG QRRISMLEEE EKKKMEEEME QANAGWLTRT TSKLKTYVAD VSEYLGSNSP RDPYLERQL

Arabidopsis Description

PIRL9Plant intracellular Ras-group-related LRR protein 9 [Source:UniProtKB/Swiss-Prot;Acc:Q8VYG9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.