Factsheet for Zm00001d017071_P002

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES05350	Sorghum	plastid	86.01	90.46
Os02t0593600-01	Rice	plasma membrane	70.89	74.85
TraesCS6D01G191800.1	Wheat	plastid	66.35	71.2
HORVU6Hr1G053210.1	Barley	cytosol, plastid	66.92	68.6
Zm00001d025681_P001	Maize	plasma membrane	59.74	62.95
GSMUA_Achr1P13500_001	Banana	plastid	51.23	55.42
GSMUA_Achr8P28520_001	Banana	cytosol, nucleus, plastid	50.85	53.69
CDX73881	Canola	cytosol	41.59	51.16
CDY00732	Canola	cytosol	41.59	51.16
CDX70122	Canola	cytosol	46.69	51.14
CDX98871	Canola	cytosol	46.69	51.14
VIT_17s0000g09230.t01	Wine grape	cytosol	42.72	50.33
CDY01012	Canola	plastid	44.61	49.37
Bra009140.1-P	Field mustard	cytosol	46.88	49.21
KRH57134	Soybean	plastid	47.07	48.73
AT5G05850.1	Thale cress	plastid	46.5	48.62
Bra001399.1-P	Field mustard	plastid	45.37	48.19
KRH74520	Soybean	cytosol	41.97	48.16
KRH63625	Soybean	nucleus	46.69	48.15
Bra034849.1-P	Field mustard	plastid	45.18	48.09
Solyc03g112270.2.1	Tomato	cytosol, nucleus, plastid	47.64	47.91
CDY08535	Canola	plastid	44.8	47.69
AT3G11330.1	Thale cress	plastid	44.8	47.49
AT1G12970.1	Thale cress	cytosol	41.21	46.98
CDY16042	Canola	cytosol	40.83	46.65
PGSC0003DMT400046655	Potato	cytosol	46.31	46.58
CDY26604	Canola	cytosol	40.45	46.22
Bra026944.1-P	Field mustard	cytosol	40.26	46.0
Bra032935.1-P	Field mustard	plastid	36.29	43.05
CDY69629	Canola	cytosol	27.41	42.65
CDY48988	Canola	cytosol	37.24	41.65
AT3G26500.1	Thale cress	cytosol	36.48	40.98
Zm00001d002399_P001	Maize	nucleus	17.01	35.86
Zm00001d002402_P001	Maize	cytosol, nucleus, plastid	22.87	33.33
Zm00001d047045_P001	Maize	extracellular, mitochondrion, plasma membrane	25.52	25.28
Zm00001d030062_P001	Maize	cytosol	20.23	24.65
Zm00001d031470_P001	Maize	plasma membrane	26.28	24.09
Zm00001d028191_P002	Maize	cytosol	13.99	22.29
Zm00001d018525_P004	Maize	cytosol	17.2	14.58

Protein Annotations

EntrezGene:103627372	Gene3D:3.80.10.10	MapMan:35.1	UniProt:A0A1D6HC06	ProteinID:AQK72233.1	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt
InterPro:Leu-rich_rpt_typical-subtyp	PFAM:PF13855	PFscan:PS51450	PANTHER:PTHR44373	PANTHER:PTHR44373:SF2	SMART:SM00364
SMART:SM00369	SUPFAM:SSF52058	UniParc:UPI000221317F	EnsemblPlantsGene:Zm00001d017071	EnsemblPlants:Zm00001d017071_P002	EnsemblPlants:Zm00001d017071_T002
SEG:seg	:	:	:	:	:

Description

Plant intracellular Ras-group-related LRR protein 3

Coordinates

chr5:+:184385751..184388156

Molecular Weight (calculated)

58015.2 Da

IEP (calculated)

5.241

GRAVY (calculated)

-0.313

Length

529 amino acids

Sequence
(BLAST)

001: MDPTPQSHPI LAYVLSRLPS LPAVRTPRSP RERDLEQPSP RTPSGAAEID LVGRMPGLRH PSVLSAMTRA VADVSSARDA IRLLGPRPDH EQVDASRELL
101: RLADAGKKAD ANADVKTKDL DEEKLAKCRE VVRLEEDHEA YGALLRDAEG KLEHVYQMAM HGRDIKKVGG GDGKGEEGSG AVDEEVVRVL KDAGEGKVVE
201: RVNLADRQMR LLPEPIGRIR GLLALDVSRN QLKFSSRANS LFGAFNSDVP CLNSQVIPDA IGGLEHLEEL RLASNDLVSL PDSIGLLSNL KILDVSGNRL
301: RVLPDTISKC RSLVELDASY NALAYLPTGI GHELVDLQIL RVHLNKLRSL PSSVCEMRSL RLLDAHFNEL HGLPAAIGQL SALETLDLSS NFSDMRDLPP
401: SFGDLAGLRE LDLSNNQIRA LPDCFGRLAK LERLRLDQNP LAVPPPEVVA DGVVAVNEYM ARRWAEAVAE EERRRANAAA VAESPRASTP REWLTRSVSS
501: LSTWVSDVTV KVVGQEKVDD EDEFLQQQF

Best Arabidopsis Sequence Match ( AT5G05850.1 )
(BLAST)

001: MATELNPKNF PVLSYVLDRL PSFTAKSSSS SDVEPPPSKS DPSSSSNHSI EIVTQMPHLA HPDVLASMTN ATADVSQTRS VLRTLGPRPD HETVDRARAR
101: LREIDASLSE SFEEIALSPN DIDVAEKEQK RREAVEQEKI WYKSILKLNE LHESYEKLLK EAEERLVRIY ESAEKNAAAV AEEEAAEVEV NEEVVSILQQ
201: AAENPLDRVD LSGRKLKLLP EAFGKIQGLL VLNLYNNQLQ AIPDSIAGLH NLLELDVSTN FLETLPDSIG LLSKLKILNV SCNKLTTLPD SICHCGSLVV
301: LDASYNNLTY LPTNIGFELV KLEKLLIHLN KIRSLPTSIG EMRSLRYLDA HFNELNGLPN SFGLLTNLEY LNLSSNFSDL QDLPASFGDL ISLQELDLSN
401: NQIHSLPDAF GTLVNLTKLN LDQNPLVVPP DEVVKQGVDA VKMYMGKRWV SMLEEEEKMA NMKDEMDQTN TDWLTRTTSK LKTYVTEVSE YLGSNPPRDP
501: YLDQQL

Arabidopsis Description

PIRL1Plant intracellular Ras-group-related LRR protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FFJ3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.