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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 5
  • mitochondrion 1
PPI

Inferred distinct locusB in Crop

locusBlocations
Os08t0511700-00

Inferred from Arabidopsis experimental PPI

Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3D01G264000.1 Wheat cytosol 90.42 90.96
TraesCS3B01G297300.1 Wheat nucleus 90.42 90.96
HORVU3Hr1G063670.2 Barley cytosol 90.42 90.96
TraesCS3A01G263900.1 Wheat nucleus 90.12 90.66
EES01286 Sorghum cytosol 85.63 86.14
GSMUA_Achr1P05500_001 Banana cytosol 66.17 81.25
GSMUA_Achr1P11860_001 Banana cytosol 65.57 80.22
Os05t0552300-02 Rice cytosol 80.54 80.06
GSMUA_Achr5P10020_001 Banana cytosol 72.16 79.8
PGSC0003DMT400074094 Potato cytosol 73.65 75.46
Solyc03g119040.2.1 Tomato nucleus 73.65 75.46
Solyc06g069010.2.1 Tomato nucleus 73.65 75.46
KRH60497 Soybean endoplasmic reticulum, nucleus 73.05 75.08
PGSC0003DMT400014419 Potato cytosol 73.35 74.92
VIT_17s0000g02750.t01 Wine grape cytosol, plastid 73.05 74.62
KRH41792 Soybean nucleus 72.46 74.46
Bra025931.1-P Field mustard cytosol 72.46 73.78
Bra031014.1-P Field mustard cytosol 71.56 73.09
AT1G18080.1 Thale cress cytosol 71.56 73.09
AT1G48630.1 Thale cress cytosol 71.26 73.01
AT3G18130.1 Thale cress cytosol 71.26 73.01
Solyc12g040510.1.1 Tomato cytosol 71.86 72.95
PGSC0003DMT400040923 Potato cytosol 71.86 72.95
PGSC0003DMT400041253 Potato cytosol 18.56 72.94
CDX92200 Canola extracellular 70.96 72.92
CDX95784 Canola cytosol 70.96 72.92
CDY18497 Canola cytosol 70.96 72.7
CDX95554 Canola cytosol 70.96 72.7
Bra022282.1-P Field mustard cytosol 70.66 72.62
CDY64888 Canola cytosol 64.97 72.58
Bra018745.1-P Field mustard cytosol 64.67 72.48
Bra016570.1-P Field mustard cytosol 70.96 72.48
Bra032261.1-P Field mustard cytosol 70.36 71.87
CDX93686 Canola cytosol 64.07 71.81
CDX86074 Canola cytosol 64.07 71.81
CDY44104 Canola cytosol 64.07 71.81
CDY26186 Canola cytosol 53.59 71.6
CDY60778 Canola cytosol, plastid 53.29 71.2
CDX81860 Canola cytosol 53.29 71.2
Bra021294.1-P Field mustard cytosol 69.46 71.17
CDX83869 Canola cytosol 52.99 70.8
CDY71917 Canola cytosol 51.5 70.49
CDY21720 Canola cytosol 52.69 70.4
CDX96736 Canola cytosol 52.4 70.0
CDY59680 Canola cytosol 47.01 69.78
CDY52180 Canola cytosol 31.74 65.43
KRH48610 Soybean cytosol 55.09 54.12
Bra000607.1-P Field mustard cytosol 48.5 40.91
CDX77303 Canola cytosol 24.85 26.86
CDX77299 Canola plastid 6.59 22.68
CDY46056 Canola cytosol, endoplasmic reticulum, plasma membrane 39.52 14.68
Os03t0625900-01 Rice nucleus 16.77 10.96
Protein Annotations
MapMan:17.1.3.1.33Gene3D:2.130.10.10EntrezGene:4324115EMBL:AK060428EMBL:AK098893EMBL:AK121587
EMBL:AP003452ProteinID:BAF05824.1ProteinID:BAS73760.1EMBL:D38231ProteinID:EAZ13132.1InterPro:G-protein_beta_WD-40_rep
GO:GO:0003674GO:GO:0004871GO:GO:0005488GO:GO:0005515GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005737GO:GO:0005840GO:GO:0005886GO:GO:0006950GO:GO:0006952
GO:GO:0007154GO:GO:0007165GO:GO:0008150GO:GO:0008152GO:GO:0009605GO:GO:0009607
GO:GO:0009987GO:GO:0016020GO:GO:0050832GO:GO:0060267InterPro:IPR001680InterPro:IPR015943
InterPro:IPR017986EnsemblPlantsGene:Os01g0686800EnsemblPlants:Os01t0686800-02UniProt:P49027PFAM:PF00400PRINTS:PR00320
ScanProsite:PS00678PFscan:PS50082PFscan:PS50294PANTHER:PTHR19868PANTHER:PTHR19868:SF3SMART:SM00320
SUPFAM:SSF50978UniParc:UPI0000001741InterPro:WD40/YVTN_repeat-like_dom_sfInterPro:WD40_repeatInterPro:WD40_repeat_CSInterPro:WD40_repeat_dom
InterPro:WD40_repeat_dom_sfRefSeq:XP_015620921.1SEG:seg:::
Description
RECEPTOR FOR ACTIVATED C-KINASE 1Protein containing the WD-40 repeat, Innate immunuty (Os01t0686800-01);Similar to Guanine nucleotide-binding protein subunit beta-like protein A. (Os01t0686800-02)
Coordinates
chr1:+:28330800..28333317
Molecular Weight (calculated)
36233.6 Da
IEP (calculated)
6.412
GRAVY (calculated)
-0.124
Length
334 amino acids
Sequence
(BLAST)
001: MAGAQESLVL AGVMHGHNDV VTAIATPIDN SPFIVSSSRD KSLLVWDLTN PVQNVGEGAG ASEYGVPFRR LTGHSHFVQD VVLSSDGQFA LSGSWDGELR
101: LWDLSTGVTT RRFVGHDKDV LSVAFSVDNR QIVSASRDRT IKLWNTLGEC KYTIGGDLGG GEGHNGWVSC VRFSPNTFQP TIVSGSWDRT VKVWNLTNCK
201: LRCNLEGHGG YVNAVAVSPD GSLCASGGKD GVTLLWDLAE GKRLYSLDAG SIIHSLCFSP NRYWLCAATQ DSIKIWDLES KHIVQDLKPE IPVSKNQMLY
301: CTSLNWSADG STLYAGYTDG TIRIYKISGF SYAG
Best Arabidopsis Sequence Match ( AT1G18080.1 )
(BLAST)
001: MAEGLVLKGT MRAHTDMVTA IATPIDNADI IVSASRDKSI ILWKLTKDDK AYGVAQRRLT GHSHFVEDVV LSSDGQFALS GSWDGELRLW DLAAGVSTRR
101: FVGHTKDVLS VAFSLDNRQI VSASRDRTIK LWNTLGECKY TISEGGEGHR DWVSCVRFSP NTLQPTIVSA SWDKTVKVWN LSNCKLRSTL AGHTGYVSTV
201: AVSPDGSLCA SGGKDGVVLL WDLAEGKKLY SLEANSVIHA LCFSPNRYWL CAATEHGIKI WDLESKSIVE DLKVDLKAEA EKADNSGPAA TKRKVIYCTS
301: LNWSADGSTL FSGYTDGVIR VWGIGRY
Arabidopsis Description
RACK1ARACK1A_AT [Source:UniProtKB/TrEMBL;Acc:A0A178WHX3]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.