Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDY59680 | Canola | cytosol | 65.34 | 94.67 |
CDY71917 | Canola | cytosol | 69.94 | 93.44 |
AT3G18130.1 | Thale cress | cytosol | 92.94 | 92.94 |
Bra032261.1-P | Field mustard | cytosol | 92.94 | 92.66 |
CDY64888 | Canola | cytosol | 83.44 | 90.97 |
Bra018745.1-P | Field mustard | cytosol | 83.13 | 90.94 |
CDX86074 | Canola | cytosol | 82.21 | 89.93 |
CDX93686 | Canola | cytosol | 82.21 | 89.93 |
CDY44104 | Canola | cytosol | 82.21 | 89.93 |
AT1G18080.1 | Thale cress | cytosol | 87.73 | 87.46 |
KRH60497 | Soybean | endoplasmic reticulum, nucleus | 86.2 | 86.46 |
KRH41792 | Soybean | nucleus | 85.58 | 85.85 |
VIT_17s0000g02750.t01 | Wine grape | cytosol, plastid | 85.28 | 85.02 |
Solyc03g119040.2.1 | Tomato | nucleus | 81.6 | 81.6 |
PGSC0003DMT400074094 | Potato | cytosol | 80.98 | 80.98 |
Solyc06g069010.2.1 | Tomato | nucleus | 80.37 | 80.37 |
PGSC0003DMT400014419 | Potato | cytosol | 80.37 | 80.12 |
Solyc12g040510.1.1 | Tomato | cytosol | 79.14 | 78.42 |
PGSC0003DMT400040923 | Potato | cytosol | 79.14 | 78.42 |
PGSC0003DMT400041253 | Potato | cytosol | 19.94 | 76.47 |
Zm00001d038923_P001 | Maize | plastid | 73.31 | 71.56 |
Os01t0686800-02 | Rice | cytosol | 73.01 | 71.26 |
Zm00001d009480_P001 | Maize | plasma membrane, plastid | 73.01 | 71.26 |
EES18632 | Sorghum | cytosol | 72.09 | 70.36 |
TraesCS1B01G398800.1 | Wheat | plastid | 71.78 | 69.85 |
EES01286 | Sorghum | cytosol | 70.86 | 69.58 |
TraesCS1A01G378000.1 | Wheat | cytosol, golgi, nucleus, unclear | 71.47 | 69.55 |
TraesCS1D01G385000.1 | Wheat | cytosol | 70.86 | 68.96 |
Os05t0552300-02 | Rice | cytosol | 70.86 | 68.75 |
HORVU3Hr1G063670.2 | Barley | cytosol | 69.94 | 68.67 |
TraesCS3B01G297300.1 | Wheat | nucleus | 69.94 | 68.67 |
TraesCS3D01G264000.1 | Wheat | cytosol | 69.94 | 68.67 |
TraesCS3A01G263900.1 | Wheat | nucleus | 69.63 | 68.37 |
HORVU1Hr1G083710.1 | Barley | cytosol | 67.79 | 62.96 |
GSMUA_Achr2P14580_001 | Banana | cytosol | 57.06 | 59.62 |
AT4G21130.1 | Thale cress | nucleus | 17.79 | 12.11 |
AT4G05410.1 | Thale cress | nucleus | 15.95 | 10.32 |
Protein Annotations
MapMan:17.1.3.1.33 | Gene3D:2.130.10.10 | EntrezGene:841284 | UniProt:A0A178W908 | ProteinID:AAG50846.1 | ProteinID:AAG60127.1 |
ProteinID:AEE32329.1 | ArrayExpress:AT1G48630 | EnsemblPlantsGene:AT1G48630 | RefSeq:AT1G48630 | TAIR:AT1G48630 | RefSeq:AT1G48630-TAIR-G |
EnsemblPlants:AT1G48630.1 | TAIR:AT1G48630.1 | EMBL:AY059723 | EMBL:AY087855 | EMBL:AY091352 | InterPro:G-protein_beta_WD-40_rep |
GO:GO:0003674 | GO:GO:0003735 | GO:GO:0004871 | GO:GO:0005078 | GO:GO:0005198 | GO:GO:0005488 |
GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 |
GO:GO:0005829 | GO:GO:0005840 | GO:GO:0006412 | GO:GO:0006417 | GO:GO:0006464 | GO:GO:0007154 |
GO:GO:0007165 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009719 |
GO:GO:0009791 | GO:GO:0009845 | GO:GO:0009967 | GO:GO:0009987 | GO:GO:0019538 | GO:GO:0022626 |
GO:GO:0030529 | GO:GO:0042254 | GO:GO:0042788 | GO:GO:0043410 | GO:GO:0048364 | GO:GO:0048367 |
GO:GO:0071215 | InterPro:IPR001680 | InterPro:IPR015943 | InterPro:IPR017986 | RefSeq:NP_175296.1 | ProteinID:OAP14939.1 |
PFAM:PF00400 | PO:PO:0000003 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 |
PO:PO:0000293 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PRINTS:PR00320 | ScanProsite:PS00678 |
PFscan:PS50082 | PFscan:PS50294 | PANTHER:PTHR19868 | PANTHER:PTHR19868:SF3 | UniProt:Q9C4Z6 | Symbol:RACK1B_AT |
SMART:SM00320 | SUPFAM:SSF50978 | UniParc:UPI000009EC0C | InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat | InterPro:WD40_repeat_CS |
InterPro:WD40_repeat_dom | InterPro:WD40_repeat_dom_sf | EMBL:Z26552 | : | : | : |
Description
RACK1BRACK1B_AT [Source:UniProtKB/TrEMBL;Acc:A0A178W908]
Coordinates
chr1:-:17981636..17983377
Molecular Weight (calculated)
35802.4 Da
IEP (calculated)
7.125
GRAVY (calculated)
-0.176
Length
326 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEGLVLKGT MCAHTDMVTA IATPVDNSDV IVTSSRDKSI ILWKLTKEDK SYGVAQRRMT GHSHFVQDVV LSSDGQFALS GSWDGELRLW DLATGESTRR
101: FVGHTKDVLS VAFSTDNRQI VSASRDRTIK LWNTLGECKY TISEADGHKE WVSCVRFSPN TLVPTIVSAS WDKTVKVWNL QNCKLRNTLA GHSGYLNTVA
201: VSPDGSLCAS GGKDGVILLW DLAEGKKLYS LEAGSIIHSL CFSPNRYWLC AATENSIRIW DLESKSVVED LKVDLKAEAE KTDGSTGIGN KTKVIYCTSL
301: NWSADGNTLF SGYTDGVIRV WGIGRY
101: FVGHTKDVLS VAFSTDNRQI VSASRDRTIK LWNTLGECKY TISEADGHKE WVSCVRFSPN TLVPTIVSAS WDKTVKVWNL QNCKLRNTLA GHSGYLNTVA
201: VSPDGSLCAS GGKDGVILLW DLAEGKKLYS LEAGSIIHSL CFSPNRYWLC AATENSIRIW DLESKSVVED LKVDLKAEAE KTDGSTGIGN KTKVIYCTSL
301: NWSADGNTLF SGYTDGVIRV WGIGRY
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.