Factsheet for HORVU1Hr1G083710.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	plastid
MultiLoc:	cytosol
TargetP:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G378000.1	Wheat	cytosol, golgi, nucleus, unclear	84.33	88.36
TraesCS1D01G385000.1	Wheat	cytosol	83.48	87.46
TraesCS1B01G398800.1	Wheat	plastid	82.34	86.27
Zm00001d009480_P001	Maize	plasma membrane, plastid	75.5	79.34
Zm00001d038923_P001	Maize	plastid	74.93	78.74
EES18632	Sorghum	cytosol	72.36	76.05
HORVU3Hr1G063670.2	Barley	cytosol	71.79	75.9
Os05t0552300-02	Rice	cytosol	70.09	73.21
GSMUA_Achr5P10020_001	Banana	cytosol	62.39	72.52
GSMUA_Achr1P05500_001	Banana	cytosol	56.13	72.43
GSMUA_Achr1P11860_001	Banana	cytosol	56.13	72.16
PGSC0003DMT400041253	Potato	cytosol	16.81	69.41
PGSC0003DMT400074094	Potato	cytosol	64.39	69.33
Solyc06g069010.2.1	Tomato	nucleus	64.1	69.02
Bra025931.1-P	Field mustard	cytosol	64.39	68.9
Solyc03g119040.2.1	Tomato	nucleus	63.82	68.71
Bra031014.1-P	Field mustard	cytosol	63.82	68.5
KRH60497	Soybean	endoplasmic reticulum, nucleus	63.25	68.31
Bra016570.1-P	Field mustard	cytosol	63.53	68.2
PGSC0003DMT400014419	Potato	cytosol	63.53	68.2
KRH41792	Soybean	nucleus	62.96	68.0
VIT_17s0000g02750.t01	Wine grape	cytosol, plastid	63.25	67.89
AT1G48630.1	Thale cress	cytosol	62.96	67.79
CDX92200	Canola	extracellular	62.68	67.69
CDX95784	Canola	cytosol	62.68	67.69
AT1G18080.1	Thale cress	cytosol	62.96	67.58
AT3G18130.1	Thale cress	cytosol	62.68	67.48
CDY18497	Canola	cytosol	62.68	67.48
CDX95554	Canola	cytosol	62.68	67.48
Bra022282.1-P	Field mustard	cytosol	62.39	67.38
CDY64888	Canola	cytosol	57.27	67.22
Bra018745.1-P	Field mustard	cytosol	56.98	67.11
Bra032261.1-P	Field mustard	cytosol	62.39	66.97
CDY44104	Canola	cytosol	56.7	66.78
CDX86074	Canola	cytosol	56.7	66.78
CDX93686	Canola	cytosol	56.7	66.78
Solyc12g040510.1.1	Tomato	cytosol	62.11	66.26
PGSC0003DMT400040923	Potato	cytosol	62.11	66.26
Bra021294.1-P	Field mustard	cytosol	61.25	65.95
CDY26186	Canola	cytosol	46.72	65.6
CDY60778	Canola	cytosol, plastid	46.44	65.2
CDX81860	Canola	cytosol	46.44	65.2
CDX96736	Canola	cytosol	46.15	64.8
CDX83869	Canola	cytosol	46.15	64.8
CDY21720	Canola	cytosol	46.15	64.8
CDY71917	Canola	cytosol	45.01	64.75
CDY59680	Canola	cytosol	41.31	64.44
CDY52180	Canola	cytosol	29.34	63.58
KRH48610	Soybean	cytosol	47.29	48.82
Bra000607.1-P	Field mustard	cytosol	43.59	38.64
CDX77303	Canola	cytosol	21.65	24.6
CDX77299	Canola	plastid	6.27	22.68
CDY46056	Canola	cytosol, endoplasmic reticulum, plasma membrane	36.47	14.24
HORVU5Hr1G010440.3	Barley	cytosol, nucleus	14.81	11.13

Protein Annotations

MapMan:17.1.3.1.33	Gene3D:2.130.10.10	UniProt:A0A287GIZ9	InterPro:G-protein_beta_WD-40_rep	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	EnsemblPlantsGene:HORVU1Hr1G083710	EnsemblPlants:HORVU1Hr1G083710.1	InterPro:IPR001680	InterPro:IPR015943	InterPro:IPR017986
PFAM:PF00400	PRINTS:PR00320	ScanProsite:PS00678	PFscan:PS50082	PFscan:PS50294	PANTHER:PTHR19868
PANTHER:PTHR19868:SF3	SMART:SM00320	SUPFAM:SSF50978	UniParc:UPI000B47E67A	InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat
InterPro:WD40_repeat_CS	InterPro:WD40_repeat_dom	InterPro:WD40_repeat_dom_sf	SEG:seg	:	:

Description

No Description!

Coordinates

chrchr1H:-:532325138..532327679

Molecular Weight (calculated)

38454.8 Da

IEP (calculated)

8.581

GRAVY (calculated)

-0.199

Length

351 amino acids

Sequence
(BLAST)

001: NPPPLRRRRR RHLHPPRREL RPTNLPAAAM ANMQESLTLV GTMRGHNDVV TAIAAPIDNS PYIVSGSRDK SLLVWDLTNP VASLGDGTVG TDYAVPFRRL
101: TGHGHFVQDV VISSDGQFAL SGSWDGELRL WDLSTGLTTR RFVGHTKDVI SVAFSVDNRQ IVSASRDNTI KLWNTLGECK YTIGGDMGGG EGHTGWVSCV
201: RFSPNIQQPT IVSGSWDKTV KVWNLANCKL RSTLAGHGGY VNAVAVSPDG SLCASGGKDG VTLLWDLSEG KRLYQLEAGS IIHSLCFSPN RYWLCAATEE
301: SIKIWDLESK HVVQDLKPEV QVSKNQVLPS TAVYLLVRSA VMFDYDSSLR V

Best Arabidopsis Sequence Match ( AT1G18080.1 )
(BLAST)

001: MAEGLVLKGT MRAHTDMVTA IATPIDNADI IVSASRDKSI ILWKLTKDDK AYGVAQRRLT GHSHFVEDVV LSSDGQFALS GSWDGELRLW DLAAGVSTRR
101: FVGHTKDVLS VAFSLDNRQI VSASRDRTIK LWNTLGECKY TISEGGEGHR DWVSCVRFSP NTLQPTIVSA SWDKTVKVWN LSNCKLRSTL AGHTGYVSTV
201: AVSPDGSLCA SGGKDGVVLL WDLAEGKKLY SLEANSVIHA LCFSPNRYWL CAATEHGIKI WDLESKSIVE DLKVDLKAEA EKADNSGPAA TKRKVIYCTS
301: LNWSADGSTL FSGYTDGVIR VWGIGRY

Arabidopsis Description

RACK1ARACK1A_AT [Source:UniProtKB/TrEMBL;Acc:A0A178WHX3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.