CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
EES14257

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G48630.1	EES14257	AT4G35470.1	21798944
AT3G18130.1	EES14257	AT4G35470.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d038923_P001	Maize	plastid	95.81	95.81
Zm00001d009480_P001	Maize	plasma membrane, plastid	95.81	95.81
TraesCS1A01G378000.1	Wheat	cytosol, golgi, nucleus, unclear	83.53	83.28
TraesCS1B01G398800.1	Wheat	plastid	83.23	82.99
TraesCS1D01G385000.1	Wheat	cytosol	82.63	82.39
EES01286	Sorghum	cytosol	81.74	82.23
GSMUA_Achr1P11860_001	Banana	cytosol	64.97	79.49
GSMUA_Achr1P05500_001	Banana	cytosol	64.37	79.04
GSMUA_Achr5P10020_001	Banana	cytosol	70.36	77.81
Os05t0552300-02	Rice	cytosol	76.95	76.49
Solyc03g119040.2.1	Tomato	nucleus	73.65	75.46
PGSC0003DMT400014419	Potato	cytosol	73.35	74.92
Solyc06g069010.2.1	Tomato	nucleus	73.05	74.85
PGSC0003DMT400074094	Potato	cytosol	73.05	74.85
KRH60497	Soybean	endoplasmic reticulum, nucleus	72.16	74.15
VIT_17s0000g02750.t01	Wine grape	cytosol, plastid	72.46	74.01
KRH41792	Soybean	nucleus	71.56	73.54
Bra025931.1-P	Field mustard	cytosol	71.56	72.87
Bra031014.1-P	Field mustard	cytosol	71.26	72.78
Bra016570.1-P	Field mustard	cytosol	71.26	72.78
AT3G18130.1	Thale cress	cytosol	70.66	72.39
HORVU1Hr1G083710.1	Barley	cytosol	76.05	72.36
Solyc12g040510.1.1	Tomato	cytosol	71.26	72.34
PGSC0003DMT400040923	Potato	cytosol	71.26	72.34
AT1G18080.1	Thale cress	cytosol	70.66	72.17
AT1G48630.1	Thale cress	cytosol	70.36	72.09
CDY64888	Canola	cytosol	64.37	71.91
Bra032261.1-P	Field mustard	cytosol	70.36	71.87
Bra018745.1-P	Field mustard	cytosol	64.07	71.81
PGSC0003DMT400041253	Potato	cytosol	18.26	71.76
CDX95784	Canola	cytosol	69.76	71.69
CDX92200	Canola	extracellular	69.76	71.69
CDY18497	Canola	cytosol	69.76	71.47
CDX95554	Canola	cytosol	69.76	71.47
Bra022282.1-P	Field mustard	cytosol	69.46	71.38
CDY44104	Canola	cytosol	63.47	71.14
CDX86074	Canola	cytosol	63.47	71.14
CDX93686	Canola	cytosol	63.47	71.14
CDY71917	Canola	cytosol	51.8	70.9
CDY26186	Canola	cytosol	52.69	70.4
CDX83869	Canola	cytosol	52.69	70.4
CDX96736	Canola	cytosol	52.69	70.4
Bra021294.1-P	Field mustard	cytosol	68.56	70.25
CDY59680	Canola	cytosol	47.31	70.22
CDY21720	Canola	cytosol	52.4	70.0
CDX81860	Canola	cytosol	52.4	70.0
CDY60778	Canola	cytosol, plastid	52.4	70.0
CDY52180	Canola	cytosol	32.04	66.05
KRH48610	Soybean	cytosol	53.29	52.35
Bra000607.1-P	Field mustard	cytosol	48.5	40.91
CDX77303	Canola	cytosol	25.75	27.83
CDX77299	Canola	plastid	7.19	24.74
CDY46056	Canola	cytosol, endoplasmic reticulum, plasma membrane	38.92	14.46
EER91177	Sorghum	cytosol, nucleus, plastid	17.96	11.72

Protein Annotations

MapMan:17.1.3.1.33	Gene3D:2.130.10.10	EntrezGene:8063065	UniProt:C5YV24	EnsemblPlants:EES18632	ProteinID:EES18632
ProteinID:EES18632.1	InterPro:G-protein_beta_WD-40_rep	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR001680
InterPro:IPR015943	InterPro:IPR017986	PFAM:PF00400	PRINTS:PR00320	ScanProsite:PS00678	PFscan:PS50082
PFscan:PS50294	PANTHER:PTHR19868	PANTHER:PTHR19868:SF3	SMART:SM00320	EnsemblPlantsGene:SORBI_3009G223300	SUPFAM:SSF50978
unigene:Sbi.18334	UniParc:UPI0001A88DB6	InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat	InterPro:WD40_repeat_CS	InterPro:WD40_repeat_dom
InterPro:WD40_repeat_dom_sf	RefSeq:XP_002440202.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr9:+:56594236..56596576

Molecular Weight (calculated)

36190.6 Da

IEP (calculated)

6.776

GRAVY (calculated)

-0.154

Length

334 amino acids

Sequence
(BLAST)

001: MAGAQESLSL VGTMRAHNGE VTAIATPIDN SPFIVSASRD KSVLLWDLEN PVHSTPESGV TADYGVPKRR LTGHSHFVQD VVLSSDGMFA LSGSWDGELR
101: LWDLSTGATT RRFVGHGKDI LSVAFSVDNR QIISASRDKT IKLWNTLGEC KYTIGGDLGG GEGHNGWVSC VRFSPNTFQP TIVSGSWDRT VKVWNLTNCK
201: LRCTLDGHGG YVNAVAVSPD GSLCASGGKD GVTLLWDLAE GKRLYSLDAG SIIHSLCFSP NRYWLCAATQ DSVKIWDLES KHVVQDLKPD IQISKNQILY
301: CSSLSWSADG STLYTGYTDG SIRVWKISAY GYAG

Best Arabidopsis Sequence Match ( AT1G18080.1 )
(BLAST)

001: MAEGLVLKGT MRAHTDMVTA IATPIDNADI IVSASRDKSI ILWKLTKDDK AYGVAQRRLT GHSHFVEDVV LSSDGQFALS GSWDGELRLW DLAAGVSTRR
101: FVGHTKDVLS VAFSLDNRQI VSASRDRTIK LWNTLGECKY TISEGGEGHR DWVSCVRFSP NTLQPTIVSA SWDKTVKVWN LSNCKLRSTL AGHTGYVSTV
201: AVSPDGSLCA SGGKDGVVLL WDLAEGKKLY SLEANSVIHA LCFSPNRYWL CAATEHGIKI WDLESKSIVE DLKVDLKAEA EKADNSGPAA TKRKVIYCTS
301: LNWSADGSTL FSGYTDGVIR VWGIGRY

Arabidopsis Description

RACK1ARACK1A_AT [Source:UniProtKB/TrEMBL;Acc:A0A178WHX3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.