Factsheet for GSMUA_Achr1P11860_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr1P05500_001	Banana	cytosol	91.21	91.54
GSMUA_Achr5P10020_001	Banana	cytosol	94.14	85.1
Zm00001d038923_P001	Maize	plastid	81.69	66.77
Zm00001d009480_P001	Maize	plasma membrane, plastid	81.32	66.47
Os01t0686800-02	Rice	cytosol	80.22	65.57
TraesCS1B01G398800.1	Wheat	plastid	79.85	65.07
EES18632	Sorghum	cytosol	79.49	64.97
TraesCS1A01G378000.1	Wheat	cytosol, golgi, nucleus, unclear	79.12	64.48
HORVU3Hr1G063670.2	Barley	cytosol	77.66	63.86
TraesCS3B01G297300.1	Wheat	nucleus	77.66	63.86
TraesCS3D01G264000.1	Wheat	cytosol	77.66	63.86
Os05t0552300-02	Rice	cytosol	78.39	63.69
TraesCS1D01G385000.1	Wheat	cytosol	78.02	63.58
EES01286	Sorghum	cytosol	77.29	63.55
TraesCS3A01G263900.1	Wheat	nucleus	77.29	63.55
HORVU1Hr1G083710.1	Barley	cytosol	72.16	56.13
GSMUA_Achr2P14580_001	Banana	cytosol	59.34	51.92
GSMUA_Achr8P02970_001	Banana	nucleus	16.85	9.09
GSMUA_Achr10P...	Banana	nucleus	16.48	8.62

Protein Annotations

MapMan:17.1.3.1.33	Gene3D:2.130.10.10	InterPro:G-protein_beta_WD-40_rep	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
EnsemblPlantsGene:GSMUA_Achr1G11860_001	EnsemblPlants:GSMUA_Achr1P11860_001	EnsemblPlants:GSMUA_Achr1T11860_001	InterPro:IPR001680	InterPro:IPR015943	InterPro:IPR017986
UniProt:M0RZ44	PFAM:PF00400	PRINTS:PR00320	ScanProsite:PS00678	PFscan:PS50082	PFscan:PS50294
PANTHER:PTHR19868	PANTHER:PTHR19868:SF3	SMART:SM00320	SUPFAM:SSF50978	UniParc:UPI0002951E32	InterPro:WD40/YVTN_repeat-like_dom_sf
InterPro:WD40_repeat	InterPro:WD40_repeat_CS	InterPro:WD40_repeat_dom	InterPro:WD40_repeat_dom_sf	SEG:seg	:

Description

Guanine nucleotide-binding protein subunit beta-like protein [Source:GMGC_GENE;Acc:GSMUA_Achr1G11860_001]

Coordinates

chr1:-:9038512..9042025

Molecular Weight (calculated)

29944.1 Da

IEP (calculated)

7.136

GRAVY (calculated)

-0.202

Length

273 amino acids

Sequence
(BLAST)

001: MIVSSSRDKS VLVWHLTKDA PAALADGSGA GSAYGVPRRR LTGHSHFVED VVLSSDGQFA LSGSWDGDLR LWDLSTGATT RRFSGHTKDV LSVSFSVDNR
101: QIVSASRDRT IKLWNTLGEC KYTIQDADAH TNWVSCVWNL TNCKLRSTLA GHSGYVNTVA VSPDGSLCAS GGKDGVTLLW DLAEGKRLYS LDAGAIIHSL
201: CFSPNRYWLC AATQESVKIW DLESKTIVQD LKPETTTTKN QMLYCTSLTW SADGSTLFTG YTDGTIRVWE IRY

Best Arabidopsis Sequence Match ( AT1G48630.1 )
(BLAST)

001: MAEGLVLKGT MCAHTDMVTA IATPVDNSDV IVTSSRDKSI ILWKLTKEDK SYGVAQRRMT GHSHFVQDVV LSSDGQFALS GSWDGELRLW DLATGESTRR
101: FVGHTKDVLS VAFSTDNRQI VSASRDRTIK LWNTLGECKY TISEADGHKE WVSCVRFSPN TLVPTIVSAS WDKTVKVWNL QNCKLRNTLA GHSGYLNTVA
201: VSPDGSLCAS GGKDGVILLW DLAEGKKLYS LEAGSIIHSL CFSPNRYWLC AATENSIRIW DLESKSVVED LKVDLKAEAE KTDGSTGIGN KTKVIYCTSL
301: NWSADGNTLF SGYTDGVIRV WGIGRY

Arabidopsis Description

RACK1BRACK1B_AT [Source:UniProtKB/TrEMBL;Acc:A0A178W908]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.