Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY39169 | Canola | cytosol, nucleus, plastid | 56.75 | 76.88 |
| CDY21330 | Canola | nucleus | 73.02 | 76.03 |
| Bra000814.1-P | Field mustard | nucleus | 73.41 | 75.51 |
| CDY62001 | Canola | nucleus | 72.42 | 75.26 |
| Bra029576.1-P | Field mustard | nucleus | 69.25 | 71.81 |
| AT4G21130.1 | Thale cress | nucleus | 56.15 | 59.08 |
| KRH11768 | Soybean | cytosol, mitochondrion, nucleus | 27.18 | 53.31 |
| VIT_10s0003g04610.t01 | Wine grape | nucleus | 53.97 | 52.41 |
| PGSC0003DMT400054611 | Potato | nucleus | 52.18 | 50.97 |
| Solyc02g069770.2.1 | Tomato | nucleus | 51.79 | 50.58 |
| KRH36772 | Soybean | nucleus | 48.81 | 49.6 |
| GSMUA_Achr8P02970_001 | Banana | nucleus | 49.4 | 49.21 |
| GSMUA_Achr10P... | Banana | nucleus | 50.6 | 48.85 |
| HORVU5Hr1G010440.3 | Barley | cytosol, nucleus | 44.44 | 47.97 |
| CDY28878 | Canola | nucleus | 28.57 | 47.68 |
| EER91177 | Sorghum | cytosol, nucleus, plastid | 48.41 | 47.66 |
| Zm00001d033244_P001 | Maize | cytosol, nucleus, plastid | 47.62 | 47.06 |
| Os03t0625900-01 | Rice | nucleus | 47.42 | 46.77 |
| Zm00001d013697_P002 | Maize | plasma membrane | 47.02 | 46.29 |
| TraesCS5A01G043100.1 | Wheat | plastid | 46.43 | 45.0 |
| TraesCS5D01G051600.1 | Wheat | nucleus | 46.03 | 44.79 |
| Bra014236.1-P | Field mustard | cytosol, endoplasmic reticulum, nucleus, plastid | 14.88 | 38.46 |
| CDY45049 | Canola | endoplasmic reticulum, mitochondrion, nucleus, plastid | 14.29 | 36.92 |
| AT3G18130.1 | Thale cress | cytosol | 10.52 | 16.26 |
| AT1G18080.1 | Thale cress | cytosol | 10.52 | 16.21 |
| AT1G48630.1 | Thale cress | cytosol | 10.32 | 15.95 |
Protein Annotations
| MapMan:17.1.3.2.1.9 | Gene3D:2.130.10.10 | EntrezGene:825889 | ProteinID:AEE82516.1 | ArrayExpress:AT4G05410 | EnsemblPlantsGene:AT4G05410 |
| RefSeq:AT4G05410 | TAIR:AT4G05410 | RefSeq:AT4G05410-TAIR-G | EnsemblPlants:AT4G05410.1 | TAIR:AT4G05410.1 | EMBL:AY099817 |
| Unigene:At.33853 | EMBL:BT000325 | ProteinID:CAB81083.1 | ncoils:Coil | InterPro:G-protein_beta_WD-40_rep | GO:GO:0000003 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005730 | GO:GO:0006139 | GO:GO:0006364 |
| GO:GO:0007154 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009553 | GO:GO:0009790 |
| GO:GO:0009791 | GO:GO:0009793 | GO:GO:0009856 | GO:GO:0009875 | GO:GO:0009987 | GO:GO:0030515 |
| GO:GO:0030529 | GO:GO:0032040 | GO:GO:0034511 | GO:GO:0060321 | GO:GO:0080008 | InterPro:IPR001680 |
| InterPro:IPR015943 | InterPro:IPR017986 | RefSeq:NP_192450.1 | PFAM:PF00400 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0009089 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PRINTS:PR00320 | ScanProsite:PS00678 |
| PFscan:PS50082 | PFscan:PS50294 | PANTHER:PTHR19865 | PANTHER:PTHR19865:SF0 | UniProt:Q9M0V4 | SMART:SM00320 |
| SUPFAM:SSF50978 | UniParc:UPI00000AC55F | InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat | InterPro:WD40_repeat_CS | InterPro:WD40_repeat_dom |
| InterPro:WD40_repeat_dom_sf | Symbol:YAO | SEG:seg | : | : | : |
Description
YAOU3 snoRNP-associated protein-like YAO [Source:UniProtKB/Swiss-Prot;Acc:Q9M0V4]
Coordinates
chr4:-:2742932..2745635
Molecular Weight (calculated)
56521.7 Da
IEP (calculated)
6.181
GRAVY (calculated)
-0.790
Length
504 amino acids
Sequence
(BLAST)
(BLAST)
001: MKYNNEKKKG GSFKRGGKKG SNERDPFFEE EPKKRRKVSY DDDDIESVDS DAEENGFTGG DEDGRRVDGE VEDEDEFADE TAGEKRKRLA EEMLNRRREA
101: MRREREEADN DDDDDEDDDE TIKKSLMQKQ QEDSGRIRRL IASRVQEPLS TDGFSVIVKH RRSVVSVALS DDDSRGFSAS KDGTIMHWDV SSGKTDKYIW
201: PSDEILKSHG MKLREPRNKN HSRESLALAV SSDGRYLATG GVDRHVHIWD VRTREHVQAF PGHRNTVSCL CFRYGTSELY SGSFDRTVKV WNVEDKAFIT
301: ENHGHQGEIL AIDALRKERA LTVGRDRTML YHKVPESTRM IYRAPASSLE SCCFISDNEY LSGSDNGTVA LWGMLKKKPV FVFKNAHQDI PDGITTNGIL
401: ENGDHEPVNN NCSANSWVNA VATSRGSDLA ASGAGNGFVR LWAVETNAIR PLYELPLTGF VNSLAFAKSG KFLIAGVGQE TRFGRWGCLK SAQNGVAIHP
501: LRLA
101: MRREREEADN DDDDDEDDDE TIKKSLMQKQ QEDSGRIRRL IASRVQEPLS TDGFSVIVKH RRSVVSVALS DDDSRGFSAS KDGTIMHWDV SSGKTDKYIW
201: PSDEILKSHG MKLREPRNKN HSRESLALAV SSDGRYLATG GVDRHVHIWD VRTREHVQAF PGHRNTVSCL CFRYGTSELY SGSFDRTVKV WNVEDKAFIT
301: ENHGHQGEIL AIDALRKERA LTVGRDRTML YHKVPESTRM IYRAPASSLE SCCFISDNEY LSGSDNGTVA LWGMLKKKPV FVFKNAHQDI PDGITTNGIL
401: ENGDHEPVNN NCSANSWVNA VATSRGSDLA ASGAGNGFVR LWAVETNAIR PLYELPLTGF VNSLAFAKSG KFLIAGVGQE TRFGRWGCLK SAQNGVAIHP
501: LRLA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.