Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra000814.1-P | Field mustard | nucleus | 97.11 | 96.12 |
| CDY21330 | Canola | nucleus | 94.64 | 94.83 |
| CDY39169 | Canola | cytosol, nucleus, plastid | 64.33 | 83.87 |
| AT4G05410.1 | Thale cress | nucleus | 75.26 | 72.42 |
| CDY28878 | Canola | nucleus | 34.43 | 55.3 |
| KRH11768 | Soybean | cytosol, mitochondrion, nucleus | 28.25 | 53.31 |
| PGSC0003DMT400054611 | Potato | nucleus | 54.23 | 50.97 |
| VIT_10s0003g04610.t01 | Wine grape | nucleus | 54.23 | 50.67 |
| Solyc02g069770.2.1 | Tomato | nucleus | 53.81 | 50.58 |
| KRH36772 | Soybean | nucleus | 51.13 | 50.0 |
| GSMUA_Achr8P02970_001 | Banana | nucleus | 51.96 | 49.8 |
| GSMUA_Achr10P... | Banana | nucleus | 51.75 | 48.08 |
| EER91177 | Sorghum | cytosol, nucleus, plastid | 50.31 | 47.66 |
| HORVU5Hr1G010440.3 | Barley | cytosol, nucleus | 45.77 | 47.54 |
| Os03t0625900-01 | Rice | nucleus | 49.48 | 46.97 |
| Zm00001d033244_P001 | Maize | cytosol, nucleus, plastid | 49.07 | 46.67 |
| Zm00001d013697_P002 | Maize | plasma membrane | 48.45 | 45.9 |
| TraesCS5A01G043100.1 | Wheat | plastid | 48.66 | 45.38 |
| TraesCS5D01G051600.1 | Wheat | nucleus | 48.45 | 45.37 |
| CDY45049 | Canola | endoplasmic reticulum, mitochondrion, nucleus, plastid | 17.53 | 43.59 |
| CDY71917 | Canola | cytosol | 8.45 | 16.8 |
| CDY59680 | Canola | cytosol | 7.42 | 16.0 |
| CDX81860 | Canola | cytosol | 8.25 | 16.0 |
| CDX83869 | Canola | cytosol | 8.25 | 16.0 |
| CDX96736 | Canola | cytosol | 8.25 | 16.0 |
| CDY26186 | Canola | cytosol | 8.25 | 16.0 |
| CDY21720 | Canola | cytosol | 8.04 | 15.6 |
| CDY60778 | Canola | cytosol, plastid | 8.04 | 15.6 |
| CDX95784 | Canola | cytosol | 10.31 | 15.38 |
| CDX92200 | Canola | extracellular | 10.31 | 15.38 |
| CDX95554 | Canola | cytosol | 10.31 | 15.34 |
| CDY18497 | Canola | cytosol | 10.31 | 15.34 |
| CDX77299 | Canola | plastid | 2.89 | 14.43 |
| CDY64888 | Canola | cytosol | 8.87 | 14.38 |
| CDX93686 | Canola | cytosol | 8.45 | 13.76 |
| CDX86074 | Canola | cytosol | 8.45 | 13.76 |
| CDY44104 | Canola | cytosol | 8.45 | 13.76 |
| CDY52180 | Canola | cytosol | 4.54 | 13.58 |
| CDX77303 | Canola | cytosol | 5.57 | 8.74 |
| CDY46056 | Canola | cytosol, endoplasmic reticulum, plasma membrane | 11.75 | 6.34 |
Protein Annotations
| MapMan:17.1.3.2.1.9 | Gene3D:2.130.10.10 | UniProt:A0A078JCJ3 | EnsemblPlants:CDY62001 | ProteinID:CDY62001 | ProteinID:CDY62001.1 |
| InterPro:G-protein_beta_WD-40_rep | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0006139 | GO:GO:0006364 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0034511 |
| EnsemblPlantsGene:GSBRNA2T00035812001 | InterPro:IPR001680 | InterPro:IPR015943 | InterPro:IPR017986 | PFAM:PF00400 | PRINTS:PR00320 |
| ScanProsite:PS00678 | PFscan:PS50082 | PFscan:PS50294 | PANTHER:PTHR19865 | PANTHER:PTHR19865:SF0 | SMART:SM00320 |
| SUPFAM:SSF50978 | UniParc:UPI0004EEB9C9 | InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat | InterPro:WD40_repeat_CS | InterPro:WD40_repeat_dom |
| InterPro:WD40_repeat_dom_sf | SEG:seg | : | : | : | : |
Description
BnaA03g57210DBnaA03g57210D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JCJ3]
Coordinates
chrLK034076:+:32766..35228
Molecular Weight (calculated)
53746.8 Da
IEP (calculated)
7.129
GRAVY (calculated)
-0.653
Length
485 amino acids
Sequence
(BLAST)
(BLAST)
001: MKHPKGGGFK RGGGKKGSTD ADPFFEQETK KRRKVSYDDE DIESIDSDAE ENGFHGEDRK GFADETAGEK RKRLAEALLL RTREAQRRQR EERDDDEEDD
101: EDEDDDIVKT LMKQQQEDSG RVRRAIASSV QEPLSSDEFS IIVKHRKSVV SVALSDDDTR GFSASKDGTI LHWDVSSGKS DKYKWPSDEV LKSHGMKVRE
201: PRSKKHSRES LALAVSSDGR YLATGGVDRH VHIWDVRTRE HVQAFPGHRN TVSCLCFRHG TAELYSGSFD RSVKAWNVED KAFVQDSFGH QDEILAIDAL
301: RKERALTVGR DRTMLLHKMP ETSRTIYRAP ASSLESCCFI SDTEYLSGSD NGTVALWGML KKKPVFLLKN AHAVVADGTA TTENGDHDYV NSSTTNSWVS
401: SVAVCRSSDL AASGAGNGFV HLMAVEAGAI RPLFKLPLTG FVNSMAFAKS GKFLIAGVGQ ETRFGRWGCI KSAQNGVAIH PLRLS
101: EDEDDDIVKT LMKQQQEDSG RVRRAIASSV QEPLSSDEFS IIVKHRKSVV SVALSDDDTR GFSASKDGTI LHWDVSSGKS DKYKWPSDEV LKSHGMKVRE
201: PRSKKHSRES LALAVSSDGR YLATGGVDRH VHIWDVRTRE HVQAFPGHRN TVSCLCFRHG TAELYSGSFD RSVKAWNVED KAFVQDSFGH QDEILAIDAL
301: RKERALTVGR DRTMLLHKMP ETSRTIYRAP ASSLESCCFI SDTEYLSGSD NGTVALWGML KKKPVFLLKN AHAVVADGTA TTENGDHDYV NSSTTNSWVS
401: SVAVCRSSDL AASGAGNGFV HLMAVEAGAI RPLFKLPLTG FVNSMAFAKS GKFLIAGVGQ ETRFGRWGCI KSAQNGVAIH PLRLS
001: MKYNNEKKKG GSFKRGGKKG SNERDPFFEE EPKKRRKVSY DDDDIESVDS DAEENGFTGG DEDGRRVDGE VEDEDEFADE TAGEKRKRLA EEMLNRRREA
101: MRREREEADN DDDDDEDDDE TIKKSLMQKQ QEDSGRIRRL IASRVQEPLS TDGFSVIVKH RRSVVSVALS DDDSRGFSAS KDGTIMHWDV SSGKTDKYIW
201: PSDEILKSHG MKLREPRNKN HSRESLALAV SSDGRYLATG GVDRHVHIWD VRTREHVQAF PGHRNTVSCL CFRYGTSELY SGSFDRTVKV WNVEDKAFIT
301: ENHGHQGEIL AIDALRKERA LTVGRDRTML YHKVPESTRM IYRAPASSLE SCCFISDNEY LSGSDNGTVA LWGMLKKKPV FVFKNAHQDI PDGITTNGIL
401: ENGDHEPVNN NCSANSWVNA VATSRGSDLA ASGAGNGFVR LWAVETNAIR PLYELPLTGF VNSLAFAKSG KFLIAGVGQE TRFGRWGCLK SAQNGVAIHP
501: LRLA
101: MRREREEADN DDDDDEDDDE TIKKSLMQKQ QEDSGRIRRL IASRVQEPLS TDGFSVIVKH RRSVVSVALS DDDSRGFSAS KDGTIMHWDV SSGKTDKYIW
201: PSDEILKSHG MKLREPRNKN HSRESLALAV SSDGRYLATG GVDRHVHIWD VRTREHVQAF PGHRNTVSCL CFRYGTSELY SGSFDRTVKV WNVEDKAFIT
301: ENHGHQGEIL AIDALRKERA LTVGRDRTML YHKVPESTRM IYRAPASSLE SCCFISDNEY LSGSDNGTVA LWGMLKKKPV FVFKNAHQDI PDGITTNGIL
401: ENGDHEPVNN NCSANSWVNA VATSRGSDLA ASGAGNGFVR LWAVETNAIR PLYELPLTGF VNSLAFAKSG KFLIAGVGQE TRFGRWGCLK SAQNGVAIHP
501: LRLA
Arabidopsis Description
YAOU3 snoRNP-associated protein-like YAO [Source:UniProtKB/Swiss-Prot;Acc:Q9M0V4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.