Factsheet for GSMUA_Achr6P04810_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P24920_001	Banana	cytosol	89.53	76.39
TraesCS7D01G353900.1	Wheat	peroxisome	77.67	64.85
TraesCS7B01G259100.1	Wheat	peroxisome	76.98	64.52
KRH48412	Soybean	nucleus	75.12	64.47
TraesCS7B01G259200.1	Wheat	peroxisome	76.51	64.13
TraesCS7A01G369400.1	Wheat	unclear	76.74	64.08
KRH39268	Soybean	nucleus	74.42	63.87
TraesCS7D01G354000.1	Wheat	peroxisome	75.58	63.35
KRH48410	Soybean	cytosol	72.33	62.08
PGSC0003DMT400000852	Potato	cytosol	71.86	61.8
KRH48414	Soybean	peroxisome	28.37	61.62
CDX93017	Canola	cytoskeleton, cytosol, peroxisome	71.63	61.48
KRH41586	Soybean	nucleus	71.63	61.48
Solyc12g007030.1.1	Tomato	cytosol	71.4	61.4
Bra001952.1-P	Field mustard	cytoskeleton, cytosol, peroxisome	71.4	61.28
CDX94807	Canola	cytoskeleton, cytosol, peroxisome	70.93	60.88
KRH60293	Soybean	nucleus	70.93	60.76
KRH39267	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	72.79	60.54
AT3G24503.1	Thale cress	peroxisome	70.23	60.28
KRH39270	Soybean	cytosol	70.23	60.28
TraesCS7A01G369300.1	Wheat	peroxisome	77.21	59.71
KXG20268	Sorghum	cytosol	72.33	59.69
HORVU7Hr1G085120.2	Barley	mitochondrion	77.44	59.68
KRH41589	Soybean	nucleus	69.53	59.21
Zm00001d036933_P001	Maize	cytosol	73.26	59.1
KRH60295	Soybean	mitochondrion, plastid	69.3	55.39
GSMUA_Achr3P06170_001	Banana	mitochondrion	56.51	45.68
GSMUA_Achr5P05290_001	Banana	mitochondrion	56.74	45.02
GSMUA_Achr3P26460_001	Banana	cytosol	75.58	41.51
GSMUA_Achr5P26830_001	Banana	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole	33.02	39.78
GSMUA_Achr9P16120_001	Banana	peroxisome	44.19	37.62
GSMUA_Achr6P01980_001	Banana	cytosol	28.37	24.6
GSMUA_Achr7P19330_001	Banana	cytosol	28.37	24.55
GSMUA_Achr4P22360_001	Banana	mitochondrion	29.3	23.42
GSMUA_Achr8P23610_001	Banana	cytosol, peroxisome, plastid	25.12	20.97
GSMUA_Achr11P...	Banana	endoplasmic reticulum	27.91	20.2
GSMUA_Achr8P10590_001	Banana	endoplasmic reticulum	27.91	20.17

Protein Annotations

Gene3D:3.40.309.10	Gene3D:3.40.605.10	MapMan:50.1.2	InterPro:Ald_DH/histidinol_DH	InterPro:Ald_DH_C	InterPro:Ald_DH_CS_GLU
InterPro:Ald_DH_N	InterPro:Aldehyde_DH_dom	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152
GO:GO:0016491	GO:GO:0016620	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr6G04810_001	EnsemblPlants:GSMUA_Achr6P04810_001	EnsemblPlants:GSMUA_Achr6T04810_001
InterPro:IPR016162	InterPro:IPR016163	UniProt:M0T479	PFAM:PF00171	ScanProsite:PS00687	PANTHER:PTHR11699
PANTHER:PTHR11699:SF182	SUPFAM:SSF53720	UniParc:UPI000296059D	SEG:seg	:	:

Description

Aldehyde dehydrogenase family 2 member C4 [Source:GMGC_GENE;Acc:GSMUA_Achr6G04810_001]

Coordinates

chr6:-:3264772..3268685

Molecular Weight (calculated)

46832.2 Da

IEP (calculated)

6.197

GRAVY (calculated)

-0.096

Length

430 amino acids

Sequence
(BLAST)

001: MASEANGSTG DGVKMPEIKF TKLFINGCFV DAVSGKTFET RDPRTGGVIA DIAAGDKEDV DLAVNAAREA FDHGKWPRMS GFERGRIMMK YADLIDQHAE
101: ELAAVAPALA AGCTMIVKPA EQTPLTALYY AHLAKQAGIP DGVLNVVTGF GHTAGAAITA HMDVDKVSFT GSTEVGRLVM EAAARSNLKS VSLELGGKSP
201: VIIFDDADVD MAVDLARKAI FFNKAWMGEI CVAGSRVYVQ EGIYDEFVRK IAESSRNWIV GDPFDAHVHQ GPQVDKKQFE KVLKYIDHGK REGATVLTGG
301: KPCGEKGFYI EPTIFTDVKD DMLIAKDEIF GPVMSLMKFK TIEEAIERAN NTRYGLAAGI VTKDLNIANR VSRSIRAGII WINCYFAFDD DCPFGGYKMS
401: GFGRDSGMHA LEKYLHVKSV VTPIYGSPWR

Best Arabidopsis Sequence Match ( AT3G24503.1 )
(BLAST)

001: MENGKCNGAT TVKLPEIKFT KLFINGQFID AASGKTFETI DPRNGEVIAT IAEGDKEDVD LAVNAARYAF DHGPWPRMTG FERAKLINKF ADLIEENIEE
101: LAKLDAVDGG KLFQLGKYAD IPATAGHFRY NAGAADKIHG ETLKMTRQSL FGYTLKEPIG VVGNIIPWNF PSIMFATKVA PAMAAGCTMV VKPAEQTSLS
201: ALFYAHLSKE AGIPDGVLNI VTGFGSTAGA AIASHMDVDK VSFTGSTDVG RKIMQAAAAS NLKKVSLELG GKSPLLIFND ADIDKAADLA LLGCFYNKGE
301: ICVASSRVFV QEGIYDKVVE KLVEKAKDWT VGDPFDSTAR QGPQVDKRQF EKILSYIEHG KNEGATLLTG GKAIGDKGYF IQPTIFADVT EDMKIYQDEI
401: FGPVMSLMKF KTVEEGIKCA NNTKYGLAAG ILSQDIDLIN TVSRSIKAGI IWVNCYFGFD LDCPYGGYKM SGNCRESGMD ALDNYLQTKS VVMPLHNSPW
501: M

Arabidopsis Description

ALDH2C4Aldehyde dehydrogenase family 2 member C4 [Source:UniProtKB/Swiss-Prot;Acc:Q56YU0]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.