CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytoskeleton, cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
cytoskeleton 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytoskeleton, cytosol, peroxisome
Any Predictor:	cytosol, peroxisome
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytoskeleton
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra001952.1-P	Field mustard	cytoskeleton, cytosol, peroxisome	99.8	99.8
CDX94807	Canola	cytoskeleton, cytosol, peroxisome	99.0	99.0
AT3G24503.1	Thale cress	peroxisome	88.02	88.02
GSMUA_Achr6P04810_001	Banana	cytosol	61.48	71.63
Solyc12g007030.1.1	Tomato	cytosol	71.06	71.2
PGSC0003DMT400000852	Potato	cytosol	71.06	71.2
KRH48412	Soybean	nucleus	70.66	70.66
KRH41586	Soybean	nucleus	70.66	70.66
TraesCS3A01G417200.1	Wheat	cytosol	70.46	70.6
KRH39268	Soybean	nucleus	70.26	70.26
TraesCS3D01G412700.2	Wheat	golgi	69.86	70.0
TraesCS3B01G452100.1	Wheat	golgi	69.66	69.8
GSMUA_Achr5P24920_001	Banana	cytosol	70.06	69.64
HORVU0Hr1G031700.1	Barley	cytosol	69.26	69.54
HORVU1Hr1G068020.1	Barley	cytosol	69.06	69.34
KRH60293	Soybean	nucleus	69.46	69.32
KRH48410	Soybean	cytosol	69.26	69.26
KRH39270	Soybean	cytosol	69.06	69.06
TraesCS1D01G310100.1	Wheat	peroxisome	68.06	68.89
TraesCS1B01G321900.1	Wheat	peroxisome	68.06	68.89
KXG32803	Sorghum	cytosol	68.46	68.46
TraesCS1A01G310600.1	Wheat	peroxisome	67.66	68.35
Os01t0591000-01	Rice	cytosol	68.06	67.93
Zm00001d044340_P001	Maize	cytosol	69.26	67.91
EES00989	Sorghum	cytosol	68.26	67.86
TraesCS3A01G212300.1	Wheat	peroxisome	68.06	67.79
KRH41589	Soybean	nucleus	68.06	67.52
HORVU0Hr1G028680.4	Barley	peroxisome	56.69	67.46
HORVU3Hr1G092680.2	Barley	mitochondrion, peroxisome, plastid	70.46	67.24
Os01t0591300-01	Rice	cytosol	67.86	67.06
KRH39267	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	68.46	66.34
Zm00001d011259_P001	Maize	cytosol	67.27	65.82
TraesCS7B01G259100.1	Wheat	peroxisome	66.07	64.52
TraesCS7B01G259200.1	Wheat	peroxisome	65.67	64.13
TraesCS7D01G353900.1	Wheat	peroxisome	65.67	63.88
TraesCS7D01G354000.1	Wheat	peroxisome	65.07	63.55
KXG20268	Sorghum	cytosol	66.07	63.53
TraesCS7A01G369400.1	Wheat	unclear	64.87	63.11
KRH60295	Soybean	mitochondrion, plastid	67.66	63.01
Zm00001d036933_P001	Maize	cytosol	64.87	60.98
HORVU7Hr1G085120.2	Barley	mitochondrion	66.27	59.5
TraesCS7A01G369300.1	Wheat	peroxisome	65.87	59.35
CDY21806	Canola	cytosol	53.69	54.23
Zm00001d044339_P003	Maize	cytosol, peroxisome, plasma membrane	62.87	54.03
CDY44985	Canola	mitochondrion	54.89	51.12
CDX91724	Canola	mitochondrion	54.69	51.02
CDY36910	Canola	mitochondrion	54.69	50.83
CDY57318	Canola	mitochondrion	54.29	50.65
CDY47634	Canola	mitochondrion	53.49	49.26
CDY61548	Canola	cytosol, peroxisome	53.49	48.29
CDX77883	Canola	mitochondrion	51.1	44.76
GSMUA_Achr3P26460_001	Banana	cytosol	68.46	43.81
CDX68159	Canola	plastid	42.12	42.12
CDX85862	Canola	cytosol, peroxisome, plastid	41.72	41.63
CDY21809	Canola	mitochondrion, peroxisome	41.32	41.15
CDX77890	Canola	mitochondrion, peroxisome	41.12	40.95
CDX88542	Canola	mitochondrion	37.72	34.18
CDX87380	Canola	mitochondrion	37.52	34.06
CDY55249	Canola	cytosol	24.75	28.25
CDY37216	Canola	mitochondrion	29.54	28.08
CDX81452	Canola	mitochondrion	29.54	28.08
CDY46134	Canola	peroxisome	17.37	27.19
CDY34779	Canola	peroxisome	26.55	26.44
CDY20292	Canola	cytosol	26.55	26.44
CDY61473	Canola	cytosol, peroxisome, plastid	26.55	26.39
CDY02483	Canola	cytosol, peroxisome, plastid	26.75	26.07
CDY51401	Canola	cytosol	10.98	25.0
CDY05285	Canola	vacuole	26.95	22.77
CDY24674	Canola	vacuole	26.95	22.73
CDY55250	Canola	nucleus	2.59	18.06

Protein Annotations

MapMan:21.5.1	Gene3D:3.40.309.10	Gene3D:3.40.605.10	InterPro:Ald_DH/histidinol_DH	InterPro:Ald_DH_C	InterPro:Ald_DH_CS_CYS
InterPro:Ald_DH_CS_GLU	InterPro:Ald_DH_N	InterPro:Aldehyde_DH_dom	ProteinID:CBP94210.1	EnsemblPlants:CDX93017	ProteinID:CDX93017
ProteinID:CDX93017.1	GO:E1VD28	UniProt:E1VD28	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0016620	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00154907001	InterPro:IPR016162
InterPro:IPR016163	PFAM:PF00171	ScanProsite:PS00070	ScanProsite:PS00687	PANTHER:PTHR11699	PANTHER:PTHR11699:SF182
SUPFAM:SSF53720	UniParc:UPI0001E55FC6	:	:	:	:

Description

BnaA03g37390DBnaA03g37390D protein [Source:UniProtKB/TrEMBL;Acc:E1VD28]

Coordinates

chrLK031874:-:727469..731600

Molecular Weight (calculated)

54278.3 Da

IEP (calculated)

6.431

GRAVY (calculated)

-0.089

Length

501 amino acids

Sequence
(BLAST)

001: MENGKCNGGA TAKLPEIKFT KLFINGQFLD AASGKTFETI DPRNGEVIAK IAAGDKEDVD LAVNAARHAF DHGPWPRMTG FERARIINKY TDLIQQNIEE
101: LAALDAVDGG KLFQVGKMND IPAAAGHFRY YAGAADKIHG ETLRMTRPSL FGYTLKEPIG VVGHIIPWNF PSIMFAMKVA PALAAGCTMV VKPAEQTPLS
201: ALFYAHLSKE AGFPDGVINV VTGFGSTAGA AIASHMDIDK VSFTGSTDVG RKIMQAAATS NLKKVSLELG GKSPLLIFDD ADVNKAAELA LLGCFYNKGE
301: ICVASSRVFV QEGIYDKVVA KMVEKVKDWP VGDPFDSTSR QGPQVDKKQY EKVLSYIEHG KNEGATLLTG GNAIGDKGYY IEPTIFADVT DDMKIYKEEI
401: FGPVMSLMKF KTMEEGIKCA NNTKYGLAAG IVSQNVDVIN TVSRSIKAGV IWVNCYFAFD LDSPYGGYKM SGNCRESGMD ALDSYLQVKS IAMPLHNSPW
501: M

Best Arabidopsis Sequence Match ( AT3G24503.1 )
(BLAST)

001: MENGKCNGAT TVKLPEIKFT KLFINGQFID AASGKTFETI DPRNGEVIAT IAEGDKEDVD LAVNAARYAF DHGPWPRMTG FERAKLINKF ADLIEENIEE
101: LAKLDAVDGG KLFQLGKYAD IPATAGHFRY NAGAADKIHG ETLKMTRQSL FGYTLKEPIG VVGNIIPWNF PSIMFATKVA PAMAAGCTMV VKPAEQTSLS
201: ALFYAHLSKE AGIPDGVLNI VTGFGSTAGA AIASHMDVDK VSFTGSTDVG RKIMQAAAAS NLKKVSLELG GKSPLLIFND ADIDKAADLA LLGCFYNKGE
301: ICVASSRVFV QEGIYDKVVE KLVEKAKDWT VGDPFDSTAR QGPQVDKRQF EKILSYIEHG KNEGATLLTG GKAIGDKGYF IQPTIFADVT EDMKIYQDEI
401: FGPVMSLMKF KTVEEGIKCA NNTKYGLAAG ILSQDIDLIN TVSRSIKAGI IWVNCYFGFD LDCPYGGYKM SGNCRESGMD ALDNYLQTKS VVMPLHNSPW
501: M

Arabidopsis Description

ALDH2C4Aldehyde dehydrogenase family 2 member C4 [Source:UniProtKB/Swiss-Prot;Acc:Q56YU0]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.