CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome
BaCelLo:	cytosol
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d036933_P001	Maize	cytosol	88.29	86.3
TraesCS7B01G259100.1	Wheat	peroxisome	78.12	79.34
TraesCS7D01G353900.1	Wheat	peroxisome	77.35	78.25
TraesCS7A01G369400.1	Wheat	unclear	76.97	77.86
TraesCS7B01G259200.1	Wheat	peroxisome	76.2	77.39
TraesCS7D01G354000.1	Wheat	peroxisome	75.62	76.8
TraesCS7A01G369300.1	Wheat	peroxisome	77.35	72.48
HORVU7Hr1G085120.2	Barley	mitochondrion	77.54	72.4
GSMUA_Achr6P04810_001	Banana	cytosol	59.69	72.33
EES00989	Sorghum	cytosol	67.18	69.44
KXG32803	Sorghum	cytosol	66.41	69.06
GSMUA_Achr5P24920_001	Banana	cytosol	66.6	68.85
KRH41586	Soybean	nucleus	64.88	67.47
KRH39268	Soybean	nucleus	64.11	66.67
KRH60293	Soybean	nucleus	63.92	66.33
KRH48412	Soybean	nucleus	63.72	66.27
CDX93017	Canola	cytoskeleton, cytosol, peroxisome	63.53	66.07
Bra001952.1-P	Field mustard	cytoskeleton, cytosol, peroxisome	63.34	65.87
CDX94807	Canola	cytoskeleton, cytosol, peroxisome	63.15	65.67
KRH48414	Soybean	peroxisome	24.95	65.66
PGSC0003DMT400000852	Potato	cytosol	62.76	65.4
AT3G24503.1	Thale cress	peroxisome	62.57	65.07
KRH41589	Soybean	nucleus	62.96	64.95
Solyc12g007030.1.1	Tomato	cytosol	61.8	64.4
KRH48410	Soybean	cytosol	61.8	64.27
KRH39267	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	63.53	64.02
KRH39270	Soybean	cytosol	60.65	63.07
KRH60295	Soybean	mitochondrion, plastid	62.76	60.78
KXG30827	Sorghum	mitochondrion, plastid	53.17	50.27
KXG19772	Sorghum	mitochondrion	52.98	49.64
EES13852	Sorghum	peroxisome	39.35	40.59
KXG26485	Sorghum	peroxisome	37.81	38.93
KXG29578	Sorghum	mitochondrion	36.85	36.43
EES13911	Sorghum	cytosol	25.91	27.11
EER95994	Sorghum	mitochondrion	26.49	25.56
EER98972	Sorghum	cytosol, peroxisome, plasma membrane	24.57	25.15
EER99950	Sorghum	endoplasmic reticulum	28.6	25.13

Protein Annotations

MapMan:21.5.1	Gene3D:3.40.309.10	Gene3D:3.40.605.10	UniProt:A0A194YJY8	InterPro:Ald_DH/histidinol_DH	InterPro:Ald_DH_C
InterPro:Ald_DH_CS_CYS	InterPro:Ald_DH_CS_GLU	InterPro:Ald_DH_N	InterPro:Aldehyde_DH_dom	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0016620	GO:GO:0055114	InterPro:IPR016162
InterPro:IPR016163	EnsemblPlants:KXG20268	ProteinID:KXG20268	ProteinID:KXG20268.1	PFAM:PF00171	ScanProsite:PS00070
ScanProsite:PS00687	PANTHER:PTHR11699	PANTHER:PTHR11699:SF157	EnsemblPlantsGene:SORBI_3010G178300	SUPFAM:SSF53720	UniParc:UPI0007F27E7D
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr10:+:51625698..51631645

Molecular Weight (calculated)

56272.4 Da

IEP (calculated)

5.950

GRAVY (calculated)

-0.108

Length

521 amino acids

Sequence
(BLAST)

001: MGSESNRGGA ADRMVAEEEE KKKRGGRLFE MPEIRFTKLF INGCFVDAAS GRTFETRDPR TGDVIATVAE ADKDDVDSAV RAARDAFDHG EWPRMSGSER
101: GRIMARFADL VEQHADELAA LESLDAGKHP AITKAVDIGN AAGSLRYFAG AADKIHGETL KMQAQFQGYT LREPLGVAGI IIPWNFPSTM FAIKVAPALA
201: AGCAMVVKPA EQTPLSALFF AQLAKRAGVP DGVVNVVPGF GPTAGAALAS HMDVDMVTFT GSTEVGRLIM KASAESNLKP VYLELGGKSP LIIFDDADVD
301: MAVELAVSAN FFNKGEACVA ASRVYVQEGM YSRFEEKLAE RMKSWVVGDP FSDARANQGP QVDKAQYERV LSYIDHGKRE GATLLTGGGR PAACGHKGYY
401: IEPTVFTNVT EDMVIAKEEI FGPVMCLIKF KTVEEAIWRA NDSRYGLGAG VVTRDVDVAN RVVRSVRAGV VWVNCYFAMG SDCPFGGRKM SGFGKDEGMH
501: ALDKYLAIKS VVTPLRASPW M

Best Arabidopsis Sequence Match ( AT3G24503.1 )
(BLAST)

001: MENGKCNGAT TVKLPEIKFT KLFINGQFID AASGKTFETI DPRNGEVIAT IAEGDKEDVD LAVNAARYAF DHGPWPRMTG FERAKLINKF ADLIEENIEE
101: LAKLDAVDGG KLFQLGKYAD IPATAGHFRY NAGAADKIHG ETLKMTRQSL FGYTLKEPIG VVGNIIPWNF PSIMFATKVA PAMAAGCTMV VKPAEQTSLS
201: ALFYAHLSKE AGIPDGVLNI VTGFGSTAGA AIASHMDVDK VSFTGSTDVG RKIMQAAAAS NLKKVSLELG GKSPLLIFND ADIDKAADLA LLGCFYNKGE
301: ICVASSRVFV QEGIYDKVVE KLVEKAKDWT VGDPFDSTAR QGPQVDKRQF EKILSYIEHG KNEGATLLTG GKAIGDKGYF IQPTIFADVT EDMKIYQDEI
401: FGPVMSLMKF KTVEEGIKCA NNTKYGLAAG ILSQDIDLIN TVSRSIKAGI IWVNCYFGFD LDCPYGGYKM SGNCRESGMD ALDNYLQTKS VVMPLHNSPW
501: M

Arabidopsis Description

ALDH2C4Aldehyde dehydrogenase family 2 member C4 [Source:UniProtKB/Swiss-Prot;Acc:Q56YU0]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.