CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d044340_P001	Maize	cytosol	95.83	94.52
Zm00001d011259_P001	Maize	cytosol	93.45	91.99
TraesCS1D01G310100.1	Wheat	peroxisome	88.1	89.7
TraesCS1B01G321900.1	Wheat	peroxisome	88.1	89.7
TraesCS1A01G310600.1	Wheat	peroxisome	88.1	89.52
TraesCS3A01G212300.1	Wheat	peroxisome	88.1	88.27
HORVU0Hr1G031700.1	Barley	cytosol	86.71	87.58
Os01t0591300-01	Rice	cytosol	88.1	87.57
HORVU1Hr1G068020.1	Barley	cytosol	86.51	87.37
HORVU0Hr1G028680.4	Barley	peroxisome	71.23	85.27
KXG32803	Sorghum	cytosol	71.63	72.06
KRH48414	Soybean	peroxisome	27.58	70.2
KRH41586	Soybean	nucleus	68.85	69.26
KRH48412	Soybean	nucleus	68.65	69.06
KRH39268	Soybean	nucleus	68.45	68.86
KRH60293	Soybean	nucleus	68.25	68.53
CDX93017	Canola	cytoskeleton, cytosol, peroxisome	67.86	68.26
KRH48410	Soybean	cytosol	67.86	68.26
Bra001952.1-P	Field mustard	cytoskeleton, cytosol, peroxisome	67.66	68.06
CDX94807	Canola	cytoskeleton, cytosol, peroxisome	67.66	68.06
PGSC0003DMT400000852	Potato	cytosol	67.06	67.6
KRH39270	Soybean	cytosol	66.87	67.27
KXG20268	Sorghum	cytosol	69.44	67.18
AT3G24503.1	Thale cress	peroxisome	66.47	66.87
Solyc12g007030.1.1	Tomato	cytosol	66.27	66.8
KRH41589	Soybean	nucleus	65.87	65.74
KRH39267	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	66.87	65.18
KRH60295	Soybean	mitochondrion, plastid	65.48	61.34
KXG30827	Sorghum	mitochondrion, plastid	57.14	52.27
KXG19772	Sorghum	mitochondrion	56.94	51.62
GSMUA_Achr3P26460_001	Banana	cytosol	71.83	46.23
EES13852	Sorghum	peroxisome	41.07	40.99
KXG26485	Sorghum	peroxisome	40.48	40.32
KXG29578	Sorghum	mitochondrion	40.48	38.71
EES13911	Sorghum	cytosol	28.97	29.32
EER98972	Sorghum	cytosol, peroxisome, plasma membrane	27.38	27.11
EER95994	Sorghum	mitochondrion	27.58	25.74
EER99950	Sorghum	endoplasmic reticulum	27.38	23.27

Protein Annotations

MapMan:21.5.1	Gene3D:3.40.309.10	Gene3D:3.40.605.10	EntrezGene:8082171	InterPro:Ald_DH/histidinol_DH	InterPro:Ald_DH_C
InterPro:Ald_DH_CS_CYS	InterPro:Ald_DH_CS_GLU	InterPro:Ald_DH_N	InterPro:Aldehyde_DH_dom	UniProt:C5XPJ0	EnsemblPlants:EES00989
ProteinID:EES00989	ProteinID:EES00989.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004029	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0016620	GO:GO:0055114	InterPro:IPR016162	InterPro:IPR016163
PFAM:PF00171	ScanProsite:PS00070	ScanProsite:PS00687	PANTHER:PTHR11699	PANTHER:PTHR11699:SF182	EnsemblPlantsGene:SORBI_3003G203600
SUPFAM:SSF53720	unigene:Sbi.4856	UniParc:UPI0001A84916	RefSeq:XP_002455869.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr3:+:53368965..53376625

Molecular Weight (calculated)

54247.2 Da

IEP (calculated)

5.381

GRAVY (calculated)

0.005

Length

504 amino acids

Sequence
(BLAST)

001: MASNGSNGKA APAAGVVVPE IKFTKLFING EFVDAASGKT FETRDPRTGD VLAHVAEADK ADVDLAVKSA RDAFEHGKWP RMSGYERGRI MSKLADLVEQ
101: HTEELAALDG ADAGKLVLLG KIIDIPAATQ MLRYYAGAAD KIHGEVLRVS GKYQGYTLKE PVGVVGVIIP WNFPTMMFFL KVSPALAAGC TVVVKPAEQT
201: PLSALYYAHL AKLAGVPDGV INVVPGFGPT AGAALTSHMD VDSVAFTGST EVGRLIMESA ARSNLKMVSL ELGGKSPLIV FDDADVDMAV NLSRLAIFYN
301: KGEVCVAGSR VYVQEGIYDE FVKKAVEAAQ NWKVGDPFDV TTNMGPQVDK DQFERVLKYI EHGKSEGATL LTGGKPAADK GYYIEPTIFV DVTEDMKIAQ
401: EEIFGPVMSL MKFRSVDEVI EKANCTKYGL AAGIVTKSLD IANRVSRSVR AGTVWVNCYY AFDPDAPFGG YKMSGFGRDQ GLAAMDKYLQ VKSVITALPD
501: SPWY

Best Arabidopsis Sequence Match ( AT3G24503.1 )
(BLAST)

001: MENGKCNGAT TVKLPEIKFT KLFINGQFID AASGKTFETI DPRNGEVIAT IAEGDKEDVD LAVNAARYAF DHGPWPRMTG FERAKLINKF ADLIEENIEE
101: LAKLDAVDGG KLFQLGKYAD IPATAGHFRY NAGAADKIHG ETLKMTRQSL FGYTLKEPIG VVGNIIPWNF PSIMFATKVA PAMAAGCTMV VKPAEQTSLS
201: ALFYAHLSKE AGIPDGVLNI VTGFGSTAGA AIASHMDVDK VSFTGSTDVG RKIMQAAAAS NLKKVSLELG GKSPLLIFND ADIDKAADLA LLGCFYNKGE
301: ICVASSRVFV QEGIYDKVVE KLVEKAKDWT VGDPFDSTAR QGPQVDKRQF EKILSYIEHG KNEGATLLTG GKAIGDKGYF IQPTIFADVT EDMKIYQDEI
401: FGPVMSLMKF KTVEEGIKCA NNTKYGLAAG ILSQDIDLIN TVSRSIKAGI IWVNCYFGFD LDCPYGGYKM SGNCRESGMD ALDNYLQTKS VVMPLHNSPW
501: M

Arabidopsis Description

ALDH2C4Aldehyde dehydrogenase family 2 member C4 [Source:UniProtKB/Swiss-Prot;Acc:Q56YU0]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.