Factsheet for Bra001952.1-P

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytoskeleton, cytosol

Predictor Summary:

cytosol 2
mitochondrion 2
plastid 1
cytoskeleton 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX93017	Canola	cytoskeleton, cytosol, peroxisome	99.8	99.8
AT3G24503.1	Thale cress	peroxisome	88.02	88.02
GSMUA_Achr6P04810_001	Banana	cytosol	61.28	71.4
Solyc12g007030.1.1	Tomato	cytosol	70.86	71.0
PGSC0003DMT400000852	Potato	cytosol	70.86	71.0
KRH41586	Soybean	nucleus	70.46	70.46
KRH48412	Soybean	nucleus	70.46	70.46
TraesCS3A01G417200.1	Wheat	cytosol	70.26	70.4
KRH39268	Soybean	nucleus	70.06	70.06
TraesCS3D01G412700.2	Wheat	golgi	69.66	69.8
TraesCS3B01G452100.1	Wheat	golgi	69.46	69.6
GSMUA_Achr5P24920_001	Banana	cytosol	69.86	69.44
HORVU0Hr1G031700.1	Barley	cytosol	69.06	69.34
HORVU1Hr1G068020.1	Barley	cytosol	68.86	69.14
KRH60293	Soybean	nucleus	69.26	69.12
KRH48410	Soybean	cytosol	69.06	69.06
KRH39270	Soybean	cytosol	68.86	68.86
TraesCS1B01G321900.1	Wheat	peroxisome	67.86	68.69
TraesCS1D01G310100.1	Wheat	peroxisome	67.86	68.69
KXG32803	Sorghum	cytosol	68.26	68.26
TraesCS1A01G310600.1	Wheat	peroxisome	67.47	68.15
Os01t0591000-01	Rice	cytosol	67.86	67.73
Zm00001d044340_P001	Maize	cytosol	69.06	67.71
EES00989	Sorghum	cytosol	68.06	67.66
TraesCS3A01G212300.1	Wheat	peroxisome	67.86	67.59
KRH41589	Soybean	nucleus	68.06	67.52
HORVU0Hr1G028680.4	Barley	peroxisome	56.49	67.22
HORVU3Hr1G092680.2	Barley	mitochondrion, peroxisome, plastid	70.26	67.05
Os01t0591300-01	Rice	cytosol	67.66	66.86
KRH39267	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	68.26	66.15
Zm00001d011259_P001	Maize	cytosol	67.07	65.62
TraesCS7B01G259100.1	Wheat	peroxisome	65.87	64.33
TraesCS7B01G259200.1	Wheat	peroxisome	65.47	63.94
TraesCS7D01G353900.1	Wheat	peroxisome	65.47	63.69
TraesCS7D01G354000.1	Wheat	peroxisome	64.87	63.35
KXG20268	Sorghum	cytosol	65.87	63.34
KRH60295	Soybean	mitochondrion, plastid	67.66	63.01
TraesCS7A01G369400.1	Wheat	unclear	64.67	62.91
Zm00001d036933_P001	Maize	cytosol	64.67	60.79
HORVU7Hr1G085120.2	Barley	mitochondrion	66.07	59.32
TraesCS7A01G369300.1	Wheat	peroxisome	65.67	59.17
Zm00001d044339_P003	Maize	cytosol, peroxisome, plasma membrane	62.67	53.86
Bra019522.1-P	Field mustard	mitochondrion	54.89	51.5
Bra016330.1-P	Field mustard	mitochondrion	54.49	50.84
Bra018090.1-P	Field mustard	mitochondrion	54.49	50.65
Bra024619.1-P	Field mustard	mitochondrion	53.89	50.37
GSMUA_Achr3P26460_001	Banana	cytosol	68.26	43.68
Bra003781.1-P	Field mustard	plastid	41.92	41.92
Bra019528.1-P	Field mustard	mitochondrion	41.32	41.15
Bra035119.1-P	Field mustard	mitochondrion	37.52	35.47
Bra037214.1-P	Field mustard	mitochondrion	29.54	28.08
Bra032110.1-P	Field mustard	cytosol	26.55	26.81
Bra007862.1-P	Field mustard	cytosol	26.35	26.61
Bra030906.1-P	Field mustard	cytosol, peroxisome, plastid	26.35	26.19
Bra037964.1-P	Field mustard	cytosol	11.18	24.35
Bra029596.1-P	Field mustard	vacuole	26.75	22.6

Protein Annotations

MapMan:21.5.1	Gene3D:3.40.309.10	Gene3D:3.40.605.10	InterPro:Ald_DH/histidinol_DH	InterPro:Ald_DH_C	InterPro:Ald_DH_CS_CYS
InterPro:Ald_DH_CS_GLU	InterPro:Ald_DH_N	InterPro:Aldehyde_DH_dom	EnsemblPlantsGene:Bra001952	EnsemblPlants:Bra001952.1	EnsemblPlants:Bra001952.1-P
GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009699
GO:GO:0009987	GO:GO:0016491	GO:GO:0016620	GO:GO:0019748	GO:GO:0050269	GO:GO:0055114
InterPro:IPR016162	InterPro:IPR016163	UniProt:M4CCM2	PFAM:PF00171	ScanProsite:PS00070	ScanProsite:PS00687
PANTHER:PTHR11699	PANTHER:PTHR11699:SF182	SUPFAM:SSF53720	UniParc:UPI000254081C	:	:

Description

AT3G24503 (E=6e-267) ALDH2C4, ALDH1A, REF1 | ALDH2C4; 3-chloroallyl aldehyde dehydrogenase/ aldehyde dehydrogenase (NAD)/ coniferyl-aldehyde dehydrogenase

Coordinates

chrA03:-:19569691..19573716

Molecular Weight (calculated)

54292.3 Da

IEP (calculated)

6.431

GRAVY (calculated)

-0.090

Length

501 amino acids

Sequence
(BLAST)

001: MENGKCNGGA TAKLPEIKFT KLFINGQFLD AASGKTFETI DPRNGEVIAK IAAGDKEDVD LAVNAARHAF DHGPWPRMTG FERARIINKY TDLIQQNIEE
101: LAALDAVDGG KLFQVGKMND IPAAAGHFRY YAGAADKIHG ETLRMTRPSL FGYTLKEPIG VVGHIIPWNF PSIMFAMKVA PALAAGCTMV VKPAEQTPLS
201: ALFYAHLSKE AGFPDGVINL VTGFGSTAGA AIASHMDIDK VSFTGSTDVG RKIMQAAATS NLKKVSLELG GKSPLLIFDD ADVNKAAELA LLGCFYNKGE
301: ICVASSRVFV QEGIYDKVVA KMVEKVKDWP VGDPFDSTSR QGPQVDKKQY EKVLSYIEHG KNEGATLLTG GNAIGDKGYY IEPTIFADVT DDMKIYKEEI
401: FGPVMSLMKF KTMEEGIKCA NNTKYGLAAG IVSQNVDVIN TVSRSIKAGV IWVNCYFAFD LDSPYGGYKM SGNCRESGMD ALDSYLQVKS IAMPLHNSPW
501: M

Best Arabidopsis Sequence Match ( AT3G24503.1 )
(BLAST)

001: MENGKCNGAT TVKLPEIKFT KLFINGQFID AASGKTFETI DPRNGEVIAT IAEGDKEDVD LAVNAARYAF DHGPWPRMTG FERAKLINKF ADLIEENIEE
101: LAKLDAVDGG KLFQLGKYAD IPATAGHFRY NAGAADKIHG ETLKMTRQSL FGYTLKEPIG VVGNIIPWNF PSIMFATKVA PAMAAGCTMV VKPAEQTSLS
201: ALFYAHLSKE AGIPDGVLNI VTGFGSTAGA AIASHMDVDK VSFTGSTDVG RKIMQAAAAS NLKKVSLELG GKSPLLIFND ADIDKAADLA LLGCFYNKGE
301: ICVASSRVFV QEGIYDKVVE KLVEKAKDWT VGDPFDSTAR QGPQVDKRQF EKILSYIEHG KNEGATLLTG GKAIGDKGYF IQPTIFADVT EDMKIYQDEI
401: FGPVMSLMKF KTVEEGIKCA NNTKYGLAAG ILSQDIDLIN TVSRSIKAGI IWVNCYFGFD LDCPYGGYKM SGNCRESGMD ALDNYLQTKS VVMPLHNSPW
501: M

Arabidopsis Description

ALDH2C4Aldehyde dehydrogenase family 2 member C4 [Source:UniProtKB/Swiss-Prot;Acc:Q56YU0]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.