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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 3
  • mitochondrion 2
  • plastid 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, peroxisome, plastid
BaCelLo:cytosol
EpiLoc:mitochondrion
MultiLoc:cytosol
Plant-mPloc:plastid
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:peroxisome
cytosol: 10831839
plasma membrane: 27800704
gfp PMID: 10831839 doi
Y Li, M Nakazono, N Tsutsumi, A Hirai
Laboratory of Plant Molecular Genetics, Graduate School of Agricultural and Life Sciences, The University of Tokyo, Bunkyo-ku, Japan.
msms PMID: 27800704 doi
J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3B01G452100.1 Wheat golgi 86.85 87.2
TraesCS3A01G417200.1 Wheat cytosol 86.85 87.2
TraesCS3D01G412700.2 Wheat golgi 86.65 87.0
KXG32803 Sorghum cytosol 85.86 86.03
HORVU3Hr1G092680.2 Barley mitochondrion, peroxisome, plastid 86.45 82.67
KRH48412 Soybean nucleus 72.71 72.85
KRH48414 Soybean peroxisome 28.69 72.73
KRH39268 Soybean nucleus 72.11 72.26
Os01t0591300-01 Rice cytosol 72.11 71.4
KRH41586 Soybean nucleus 71.12 71.26
KRH60293 Soybean nucleus 70.52 70.52
KRH48410 Soybean cytosol 70.12 70.26
KRH39267 Soybean cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole 72.11 70.02
Zm00001d044339_P003 Maize cytosol, peroxisome, plasma membrane 80.48 69.3
KRH39270 Soybean cytosol 69.12 69.26
Solyc12g007030.1.1 Tomato cytosol 68.92 69.2
PGSC0003DMT400000852 Potato cytosol 68.92 69.2
KRH41589 Soybean nucleus 69.52 69.11
CDX93017 Canola cytoskeleton, cytosol, peroxisome 67.93 68.06
Bra001952.1-P Field mustard cytoskeleton, cytosol, peroxisome 67.73 67.86
AT3G24503.1 Thale cress peroxisome 67.53 67.66
CDX94807 Canola cytoskeleton, cytosol, peroxisome 67.53 67.66
KRH60295 Soybean mitochondrion, plastid 68.92 64.31
Os02t0730000-02 Rice mitochondrion 57.77 52.44
Os06t0270900-01 Rice mitochondrion 56.57 51.73
GSMUA_Achr3P26460_001 Banana cytosol 74.1 47.51
Os08t0424500-01 Rice plastid 40.24 40.16
Os04t0464200-01 Rice peroxisome 39.24 39.01
Os02t0173900-01 Rice mitochondrion 20.12 32.58
Os08t0440800-01 Rice extracellular, plasma membrane 27.69 27.86
Os07t0188800-01 Rice mitochondrion 29.08 27.34
Os09t0440300-01 Rice cytosol, mitochondrion, peroxisome, plastid 26.29 25.93
Os07t0688800-01 Rice plasma membrane 27.29 22.95
Os07t0689150-00 Rice endoplasmic reticulum 5.38 14.52
Protein Annotations
MapMan:21.5.1Gene3D:3.40.309.10Gene3D:3.40.605.10EntrezGene:4326375EMBL:AB037421EMBL:AK119571
EMBL:AK121462InterPro:Ald_DH/histidinol_DHInterPro:Ald_DH_CInterPro:Ald_DH_CS_CYSInterPro:Ald_DH_CS_GLUInterPro:Ald_DH_N
InterPro:Aldehyde_DH_domProteinID:BAB55806.1ProteinID:BAF05367.1ProteinID:BAS72951.1GO:GO:0003674GO:GO:0003824
GO:GO:0004029GO:GO:0008150GO:GO:0008152GO:GO:0016491GO:GO:0016620GO:GO:0055114
InterPro:IPR016162InterPro:IPR016163EnsemblPlantsGene:Os01g0591000EnsemblPlants:Os01t0591000-01PFAM:PF00171ScanProsite:PS00070
ScanProsite:PS00687PANTHER:PTHR11699PANTHER:PTHR11699:SF227UniProt:Q9LRE9SUPFAM:SSF53720UniParc:UPI000009D5F1
RefSeq:XP_015618943.1:::::
Description
ALDEHYDE DEHYDROGENASE 1AAldehyde/histidinol dehydrogenase domain containing protein. (Os01t0591000-01);Aldehyde/histidinol dehydrogenase domain containing protein. (Os01t0591000-02)
Coordinates
chr1:+:23097292..23106301
Molecular Weight (calculated)
54174.4 Da
IEP (calculated)
6.909
GRAVY (calculated)
-0.047
Length
502 amino acids
Sequence
(BLAST)
001: MAAANGGDSK GFEVPKLEIK FTKLFINGRF VDAVSGKTFE TRDPRTGEVI AKIAEGDKAD IDLAVKAARE AFDHGPWPRM SGFARGRILH KFADLVEQHV
101: EELAALDTVD AGKLFAMGKL VDIPGGANLL RYYAGAADKV HGETLKMARP CHGYTLKEPV GVVGHIVPWN YPTTMFFFKA SPALAAGCTM VVKPAEQTPL
201: SALFYAHLAK LAGVPDGVLN VVPGFGPTAG AAISSHMDID KVSFTGSTEV GRLVMEAAAK SNLKPVSLEL GGKSPVIVFD DADLDTAVNL VHMASYTNKG
301: EICVAGSRIY VQEGIYDAFV KKATEMAKKS VVGDPFNPRV HQGPQIDKEQ YEKILKYIDI GKREGATLVT GGKPCGENGY YIEPTIFTDV KEEMSIAQEE
401: IFGPVMALMK FKTVEEAIQK ANSTRYGLAA GIVTKNIDVA NTVSRSIRAG AIWINCYLGF DPDVPFGGYK MSGFGKDMGM DALEKYLHTK AVVTPLYNTP
501: WL
Best Arabidopsis Sequence Match ( AT3G24503.1 )
(BLAST)
001: MENGKCNGAT TVKLPEIKFT KLFINGQFID AASGKTFETI DPRNGEVIAT IAEGDKEDVD LAVNAARYAF DHGPWPRMTG FERAKLINKF ADLIEENIEE
101: LAKLDAVDGG KLFQLGKYAD IPATAGHFRY NAGAADKIHG ETLKMTRQSL FGYTLKEPIG VVGNIIPWNF PSIMFATKVA PAMAAGCTMV VKPAEQTSLS
201: ALFYAHLSKE AGIPDGVLNI VTGFGSTAGA AIASHMDVDK VSFTGSTDVG RKIMQAAAAS NLKKVSLELG GKSPLLIFND ADIDKAADLA LLGCFYNKGE
301: ICVASSRVFV QEGIYDKVVE KLVEKAKDWT VGDPFDSTAR QGPQVDKRQF EKILSYIEHG KNEGATLLTG GKAIGDKGYF IQPTIFADVT EDMKIYQDEI
401: FGPVMSLMKF KTVEEGIKCA NNTKYGLAAG ILSQDIDLIN TVSRSIKAGI IWVNCYFGFD LDCPYGGYKM SGNCRESGMD ALDNYLQTKS VVMPLHNSPW
501: M
Arabidopsis Description
ALDH2C4Aldehyde dehydrogenase family 2 member C4 [Source:UniProtKB/Swiss-Prot;Acc:Q56YU0]
SUBAcon: [peroxisome]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.