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Rice
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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 1
  • mitochondrion 9
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:mitochondrion, plastid
BaCelLo:plastid
EpiLoc:mitochondrion
iPSORT:mitochondrion
MultiLoc:mitochondrion
Plant-mPloc:mitochondrion
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:mitochondrion
YLoc:mitochondrion
 mitochondrion: 11027709
mitochondrion: 17383966
mitochondrion: 12746528
mitochondrion: 15069638
mitochondrion: 16429260
mitochondrion: 16443157
plastid: 17189339
mitochondrion: 19010998
mitochondrion: 23027867
plasma membrane: 27800704
plastid: 27992503
gfp PMID: 17383966 doi
KA Howell, K Cheng, MW Murcha, LE Jenkin, AH Millar, J Whelan
Australian Research Council Centre of Excellence in Plant Energy Biology, University of Western Australia, Perth, Western Australia 6009, Australia.
gfp PMID: 11027709 doi
M Nakazono, H Tsuji, Y Li, D Saisho, S Arimura, N Tsutsumi, A Hirai
Laboratory of Plant Molecular Genetics, Graduate School of Agricultural and Life Sciences, University of Tokyo, 1-1-1 Yayoi, Bunkyo-ku, Tokyo 113-8657, Japan. anakazo@mail.ecc.u-tokyo.ac.jp
msms PMID: 23027867 doi
G Liu, H Tian, YQ Huang, J Hu, YX Ji, SQ Li, YQ Feng, L Guo, YG Zhu
State Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan 430072, China.
msms PMID: 16443157 doi
IM Møller, BK Kristensen
Department of Agricultural Sciences, The Royal Veterinary and Agricultural University, Thorvaldsensvej 40, DK-1871 Frederiksberg C, Denmark.
msms PMID: 27800704 doi
J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
msms PMID: 12746528 doi
JL Heazlewood, KA Howell, J Whelan, AH Millar
Plant Molecular Biology Group, School of Biomedical and Chemical Sciences, The University of Western Australia, Crawley 6009, Australia.
msms PMID: 16429260 doi
KA Howell, AH Millar, J Whelan
ARC Centre of Excellence in Plant Energy Biology, CMS Building M310, University of Western Australia, 35 Stirling Hwy, Perth, WA 6009, Australia.
msms PMID: 15069638 doi
N Tanaka, M Fujita, H Handa, S Murayama, M Uemura, Y Kawamura, T Mitsui, S Mikami, Y Tozawa, T Yoshinaga, S Komatsu
Department of Molecular Genetics, National Institute of Agrobiological Sciences, 305-8602, Tsukuba, Japan.
msms PMID: 19010998 doi
S Huang, NL Taylor, R Narsai, H Eubel, J Whelan, AH Millar
Australian Research Council Centre of Excellence in Plant Energy Biology, M316, University of Western Australia, Crawley, 6009 Western Australia, Australia.
msms PMID: 27992503 doi
S Xing, X Meng, L Zhou, H Mujahid, C Zhao, Y Zhang, C Wang, Z Peng
Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.
msms PMID: 17189339 doi
T Kleffmann, A von Zychlinski, D Russenberger, M Hirsch-Hoffmann, P Gehrig, W Gruissem, S Baginsky
Institute of Plant Sciences, Eidgenössische Technische Hochschule Zurich, 8092 Zurich, Switzerland.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KXG19772 Sorghum mitochondrion 89.62 88.49
TraesCS7D01G211900.1 Wheat mitochondrion 87.98 87.98
TraesCS7B01G116800.1 Wheat mitochondrion 88.34 87.86
HORVU7Hr1G042880.1 Barley mitochondrion 87.8 87.8
TraesCS7A01G210100.1 Wheat mitochondrion 87.61 87.61
GSMUA_Achr3P06170_001 Banana mitochondrion 80.33 82.89
GSMUA_Achr5P05290_001 Banana mitochondrion 81.24 82.29
Zm00001d045706_P001 Maize mitochondrion 87.43 81.91
KRH03318 Soybean mitochondrion 66.67 81.15
KRG99327 Soybean mitochondrion 77.23 79.1
KRH74615 Soybean mitochondrion 77.41 79.0
KRH45689 Soybean nucleus 77.05 78.92
KRH69545 Soybean mitochondrion 76.87 78.29
Solyc02g086970.2.1 Tomato cytosol 67.4 78.22
AT1G23800.1 Thale cress mitochondrion 75.96 78.09
VIT_14s0066g01550.t01 Wine grape mitochondrion 75.96 77.94
Solyc03g114150.2.1 Tomato plastid 75.77 77.76
CDY57318 Canola mitochondrion 75.96 77.65
Os02t0730000-02 Rice mitochondrion 78.14 77.58
PGSC0003DMT400062930 Potato cytosol 75.59 77.57
VIT_17s0000g08070.t01 Wine grape mitochondrion 75.96 77.51
Bra016330.1-P Field mustard mitochondrion 75.59 77.28
VIT_01s0026g00220.t01 Wine grape mitochondrion 76.68 77.25
CDX91724 Canola mitochondrion 75.41 77.09
VIT_01s0137g00080.t01 Wine grape cytosol 55.37 76.77
Bra024619.1-P Field mustard mitochondrion 74.32 76.12
PGSC0003DMT400010555 Potato mitochondrion 73.22 75.99
Solyc05g005700.2.1 Tomato mitochondrion, unclear 73.04 75.8
KRH54419 Soybean nucleus 74.5 75.74
CDY47634 Canola mitochondrion 74.5 75.18
KRH20324 Soybean mitochondrion 73.77 75.0
Solyc08g068190.2.1 Tomato nucleus, unclear 72.68 74.72
CDY61548 Canola cytosol, peroxisome 73.41 72.61
KRG93347 Soybean peroxisome 69.58 72.35
KRH63505 Soybean mitochondrion 57.92 71.62
PGSC0003DMT400010556 Potato plastid 30.78 70.42
PGSC0003DMT400037582 Potato mitochondrion 72.68 67.17
VIT_01s0026g00210.t01 Wine grape cytosol 65.03 60.82
Os01t0591000-01 Rice cytosol 51.73 56.57
Os01t0591300-01 Rice cytosol 51.18 55.42
Os04t0464200-01 Rice peroxisome 36.61 39.8
Os08t0424500-01 Rice plastid 36.07 39.36
Os02t0173900-01 Rice mitochondrion 20.58 36.45
Os08t0440800-01 Rice extracellular, plasma membrane 27.5 30.26
Os07t0188800-01 Rice mitochondrion 25.87 26.59
Os09t0440300-01 Rice cytosol, mitochondrion, peroxisome, plastid 24.59 26.52
Os07t0688800-01 Rice plasma membrane 27.32 25.13
Os07t0689150-00 Rice endoplasmic reticulum 5.46 16.13
Protein Annotations
Gene3D:3.40.309.10Gene3D:3.40.605.10EntrezGene:4340725MapMan:50.1.2EMBL:AB044537EMBL:AK073079
EMBL:AK099248EMBL:AK120296InterPro:Ald_DH/histidinol_DHInterPro:Ald_DH_CInterPro:Ald_DH_CS_CYSInterPro:Ald_DH_CS_GLU
InterPro:Ald_DH_NInterPro:Aldehyde_DH_domProteinID:BAD54414.1ProteinID:BAF19272.1ProteinID:BAS97182.1ncoils:Coil
ProteinID:EAZ36586.1GO:GO:0003674GO:GO:0003824GO:GO:0004029GO:GO:0004491GO:GO:0008150
GO:GO:0008152GO:GO:0016491GO:GO:0016620GO:GO:0055114InterPro:IPR016162InterPro:IPR016163
EnsemblPlantsGene:Os06g0270900EnsemblPlants:Os06t0270900-01PFAM:PF00171ScanProsite:PS00070ScanProsite:PS00687PANTHER:PTHR11699
PANTHER:PTHR11699:SF225UniProt:Q9FRX7SUPFAM:SSF53720UniParc:UPI00000AC844RefSeq:XP_015643334.1SEG:seg
Description
Similar to RF2 (EC 1.2.1.3) (T cytoplasm male sterility restorer factor 2). (Os06t0270900-01);Similar to Aldehyde dehydrogenase. (Os06t0270900-02)
Coordinates
chr6:+:9091026..9096472
Molecular Weight (calculated)
59310.0 Da
IEP (calculated)
6.794
GRAVY (calculated)
-0.036
Length
549 amino acids
Sequence
(BLAST)
001: MAAAAARRGS SLLSRCLLSR PAAAASPAVP SALRRADGTQ GLLPGILQRF STAAVAEEPI SPPVQVNYTQ LLIDGKFVDS ASGKTFPTLD PRTGELIAHV
101: AEGDAEDINR AVHAARKAFD EGPWPKMTAY ERSRILLRFA DLIEKHNDEI AALETWDNGK PYAQAANIEV PMVARLMRYY AGWADKIHGL VVPADGPHHV
201: QVLHEPIGVA GQIIPWNFPL LMFAWKVGPA LACGNTVVLK TAEQTPLSAL FASKLLHEAG LPDGVVNVVS GFGPTAGAAL ASHMDVDKIA FTGSTDTGKV
301: VLELAARSNL KSVTLELGGK SPFIIMDDAD VDHAVELAHF ALFFNQGQCC CAGSRTFVHE RIYDEFVEKA KARALKRVVG DPFKNGVEQG PQIDDEQFNK
401: ILRYIKYGVD SGANLVTGGD RLGDKGYYIQ PTIFSDVQDN MRIAQEEIFG PVQSILKFND LNEVIKRANA SQYGLAAGVF TNNLNTANTL TRALRVGTVW
501: VNCFDVFDAA IPFGGYKQSG IGREKGIDSL KNYLQVKAVV TPIKNAAWL
Best Arabidopsis Sequence Match ( AT1G23800.1 )
(BLAST)
001: MASRRVSSLL SRSFMSSSRS IFSLRGMNRG AQRYSNLAAA VENTITPPVK VEHTQLLIGG RFVDAVSGKT FPTLDPRNGE VIAQVSEGDA EDVNRAVAAA
101: RKAFDEGPWP KMTAYERSKI LFRFADLIEK HNDEIAALET WDNGKPYEQS AQIEVPMLAR VFRYYAGWAD KIHGMTMPGD GPHHVQTLHE PIGVAGQIIP
201: WNFPLLMLSW KLGPALACGN TVVLKTAEQT PLSALLVGKL LHEAGLPDGV VNIVSGFGAT AGAAIASHMD VDKVAFTGST DVGKIILELA SKSNLKAVTL
301: ELGGKSPFIV CEDADVDQAV ELAHFALFFN QGQCCCAGSR TFVHERVYDE FVEKAKARAL KRNVGDPFKS GIEQGPQVDS EQFNKILKYI KHGVEAGATL
401: QAGGDRLGSK GYYIQPTVFS DVKDDMLIAT DEIFGPVQTI LKFKDLDEVI ARANNSRYGL AAGVFTQNLD TAHRLMRALR VGTVWINCFD VLDASIPFGG
501: YKMSGIGREK GIYSLNNYLQ VKAVVTSLKN PAWL
Arabidopsis Description
ALDH2B7Aldehyde dehydrogenase family 2 member B7, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8S528]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.