Factsheet for Solyc08g068190.2.1

Subcellular Localization

min:

: max

Winner_takes_all: unclear, nucleus

Predictor Summary:

plastid 4
mitochondrion 7

Predictors

GFP

MS/MS

Papers

nucleus: 25464976
unclear: 26455813

msms PMID: 26455813 doi

P Paul, P Chaturvedi, M Selymesi, A Ghatak, A Mesihovic, KD Scharf, W Weckwerth, S Simm, E Schleiff

Goethe University, Department of Biosciences, Molecular Cell Biology of Plants, Frankfurt/Main, Germany., Goethe University, Department of Biosciences, Molecular Cell Biology of Plants, Frankfurt/Main, Germany; SPOT-ITN Consortium., Goethe University, Department of Biosciences, Molecular Cell Biology of Plants, Frankfurt/Main, Germany; SPOT-ITN Consortium; Goethe University, Cluster of Excellence Frankfurt, Frankfurt/Main, Germany; Goethe University, Buchmann Institute of Molecular Life Sciences, Frankfurt/Main, Germany. Electronic address: schleiff@bio.uni-frankfurt.de., SPOT-ITN Consortium; University of Vienna, Department of Ecogenomics and Systems biology, Vienna, Austria., University of Vienna, Department of Ecogenomics and Systems biology, Vienna, Austria; School of Biotechnology and Bioinformatics, D.Y. Patil University, Mumbai, India.

msms PMID: 25464976 doi

Y Wang, W Wang, J Cai, Y Zhang, G Qin, S Tian

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400037582	Potato	mitochondrion	94.94	85.35
Solyc05g005700.2.1	Tomato	mitochondrion, unclear	80.34	81.1
KRG99327	Soybean	mitochondrion	78.84	78.54
KRH74615	Soybean	mitochondrion	78.65	78.07
KRH45689	Soybean	nucleus	78.28	77.99
KRH69545	Soybean	mitochondrion	78.09	77.37
Solyc02g086970.2.1	Tomato	cytosol	67.79	76.53
AT1G23800.1	Thale cress	mitochondrion	76.03	76.03
CDX91724	Canola	mitochondrion	76.4	75.98
CDY57318	Canola	mitochondrion	76.4	75.98
VIT_01s0026g00220.t01	Wine grape	mitochondrion	77.53	75.96
Bra016330.1-P	Field mustard	mitochondrion	76.22	75.79
VIT_01s0137g00080.t01	Wine grape	cytosol	56.18	75.76
Solyc03g114150.2.1	Tomato	plastid	75.28	75.14
GSMUA_Achr3P06170_001	Banana	mitochondrion	74.34	74.62
GSMUA_Achr5P05290_001	Banana	mitochondrion	75.66	74.54
Bra024619.1-P	Field mustard	mitochondrion	74.16	73.88
HORVU7Hr1G042880.1	Barley	mitochondrion	75.84	73.77
HORVU6Hr1G072830.2	Barley	peroxisome	70.6	73.49
TraesCS7A01G210100.1	Wheat	mitochondrion	75.47	73.41
TraesCS7D01G211900.1	Wheat	mitochondrion	75.28	73.22
KXG19772	Sorghum	mitochondrion	76.22	73.2
TraesCS7B01G116800.1	Wheat	mitochondrion	75.66	73.19
CDY47634	Canola	mitochondrion	74.34	72.98
Os06t0270900-01	Rice	mitochondrion	74.72	72.68
CDY61548	Canola	cytosol, peroxisome	73.03	70.27
TraesCS6D01G272400.1	Wheat	mitochondrion	70.6	69.17
KXG30827	Sorghum	mitochondrion, plastid	70.79	68.6
Os02t0730000-02	Rice	mitochondrion	70.79	68.35
TraesCS6B01G321400.1	Wheat	mitochondrion	54.87	68.3
Zm00001d045706_P001	Maize	mitochondrion	74.16	67.58
Zm00001d051754_P003	Maize	cytosol	70.79	65.28
VIT_01s0026g00210.t01	Wine grape	cytosol	64.61	58.77
Solyc12g007030.1.1	Tomato	cytosol	52.25	55.8
Solyc03g113800.2.1	Tomato	plastid	37.27	39.41
Solyc06g071290.2.1	Tomato	plastid	36.14	38.29
Solyc09g090700.1.1	Tomato	plastid	35.58	36.4
Solyc07g005390.2.1	Tomato	cytosol, extracellular, nucleus, plastid	28.46	30.65
Solyc12g099290.1.1	Tomato	plastid	27.9	25.13
Solyc03g122310.2.1	Tomato	nucleus	24.91	25.05

Protein Annotations

Gene3D:3.40.309.10	Gene3D:3.40.605.10	MapMan:50.1.2	InterPro:Ald_DH/histidinol_DH	InterPro:Ald_DH_C	InterPro:Ald_DH_CS_CYS
InterPro:Ald_DH_CS_GLU	InterPro:Ald_DH_N	InterPro:Aldehyde_DH_dom	GO:GO:0003674	GO:GO:0003824	GO:GO:0004029
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0016620	GO:GO:0055114	InterPro:IPR016162
InterPro:IPR016163	UniProt:K4CM43	PFAM:PF00171	ScanProsite:PS00070	ScanProsite:PS00687	PANTHER:PTHR11699
PANTHER:PTHR11699:SF225	SUPFAM:SSF53720	EnsemblPlantsGene:Solyc08g068190.2	EnsemblPlants:Solyc08g068190.2.1	UniParc:UPI000276C88B	SEG:seg

Description

No Description!

Coordinates

chr8:+:57303048..57306002

Molecular Weight (calculated)

58402.7 Da

IEP (calculated)

6.518

GRAVY (calculated)

-0.087

Length

534 amino acids

Sequence
(BLAST)

001: MAFRLITSRL SHSSSSSLAS LFQGRNSRVA ATAALRYTTA AQDPIKPSVN VEYTKLFING QFVDSASGKT FPTLDPRTGE VIAHVAEGDV EDINRAVVAA
101: RNAFDEGPWP KMSAYERSKI LFRIADLIEK HNDEIATLET WDSGKLYQQV ATIEIPMIVR LLRYYAGWAD KIHGMTVPAD GPYHVQTLHE PIGVVGQIIP
201: WNFPLLMFAW KIGPALACGN TVVLKTAEQT PLSALYVSKL LQEAGLPEGV LNVISGFGPT AGAALSSHMD VDKLAFTGST DTGKTIMSLA ANSNLKPVTL
301: ELGGKSPFIV CEDADVDQAV EFAHFALFFN QGQCCCAGSR TYVHESIYDE FVEKAKARAL KRTVGDPFDS SNEQGPQISS EQFEKVLKYI RSGIESGATL
401: ETGGDRLGTQ GYYIKPTVFS NVKDDMLIAT DEIFGPVQSI LKFKDHDEVI RRANATKYGL AAGVFTKNID TANTFMRALR VGTIWINCFD IFDAAIPFGG
501: YKMSGQGREK GEYSLKQYLQ VKAVVTSLKN PAWL

Best Arabidopsis Sequence Match ( AT1G23800.1 )
(BLAST)

001: MASRRVSSLL SRSFMSSSRS IFSLRGMNRG AQRYSNLAAA VENTITPPVK VEHTQLLIGG RFVDAVSGKT FPTLDPRNGE VIAQVSEGDA EDVNRAVAAA
101: RKAFDEGPWP KMTAYERSKI LFRFADLIEK HNDEIAALET WDNGKPYEQS AQIEVPMLAR VFRYYAGWAD KIHGMTMPGD GPHHVQTLHE PIGVAGQIIP
201: WNFPLLMLSW KLGPALACGN TVVLKTAEQT PLSALLVGKL LHEAGLPDGV VNIVSGFGAT AGAAIASHMD VDKVAFTGST DVGKIILELA SKSNLKAVTL
301: ELGGKSPFIV CEDADVDQAV ELAHFALFFN QGQCCCAGSR TFVHERVYDE FVEKAKARAL KRNVGDPFKS GIEQGPQVDS EQFNKILKYI KHGVEAGATL
401: QAGGDRLGSK GYYIQPTVFS DVKDDMLIAT DEIFGPVQTI LKFKDLDEVI ARANNSRYGL AAGVFTQNLD TAHRLMRALR VGTVWINCFD VLDASIPFGG
501: YKMSGIGREK GIYSLNNYLQ VKAVVTSLKN PAWL

Arabidopsis Description

ALDH2B7Aldehyde dehydrogenase family 2 member B7, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8S528]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.