CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, mitochondrion

Predictor Summary:

plastid 4
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d051754_P003	Maize	cytosol	91.83	87.39
HORVU6Hr1G072830.2	Barley	peroxisome	78.77	84.6
Os02t0730000-02	Rice	mitochondrion	84.57	84.27
TraesCS6D01G272400.1	Wheat	mitochondrion	82.58	83.49
TraesCS6B01G321400.1	Wheat	mitochondrion	64.97	83.45
KXG19772	Sorghum	mitochondrion	77.68	76.98
GSMUA_Achr5P05290_001	Banana	mitochondrion	75.5	76.75
GSMUA_Achr3P06170_001	Banana	mitochondrion	74.05	76.69
KRH03318	Soybean	mitochondrion	62.43	76.27
KRG99327	Soybean	mitochondrion	72.96	75.0
Solyc03g114150.2.1	Tomato	plastid	72.6	74.77
KRH45689	Soybean	nucleus	72.6	74.63
PGSC0003DMT400062930	Potato	cytosol	72.41	74.58
KRH74615	Soybean	mitochondrion	72.6	74.35
Solyc02g086970.2.1	Tomato	cytosol	63.7	74.21
PGSC0003DMT400010555	Potato	mitochondrion	71.14	74.1
KRH69545	Soybean	mitochondrion	72.41	74.03
CDY57318	Canola	mitochondrion	72.05	73.93
VIT_14s0066g01550.t01	Wine grape	mitochondrion	71.51	73.64
Bra016330.1-P	Field mustard	mitochondrion	71.69	73.56
CDX91724	Canola	mitochondrion	71.51	73.37
Solyc05g005700.2.1	Tomato	mitochondrion, unclear	70.42	73.35
KRH54419	Soybean	nucleus	71.87	73.33
Bra024619.1-P	Field mustard	mitochondrion	71.14	73.13
VIT_17s0000g08070.t01	Wine grape	mitochondrion	71.32	73.05
AT1G23800.1	Thale cress	mitochondrion	70.78	73.03
VIT_01s0026g00220.t01	Wine grape	mitochondrion	71.87	72.66
CDY47634	Canola	mitochondrion	71.32	72.24
VIT_01s0137g00080.t01	Wine grape	cytosol	51.36	71.46
Solyc08g068190.2.1	Tomato	nucleus, unclear	68.6	70.79
KRH20324	Soybean	mitochondrion	68.97	70.37
CDY61548	Canola	cytosol, peroxisome	70.05	69.55
KRH63505	Soybean	mitochondrion	55.35	68.69
KRG93347	Soybean	peroxisome	65.52	68.37
PGSC0003DMT400010556	Potato	plastid	29.76	68.33
PGSC0003DMT400037582	Potato	mitochondrion	68.78	63.8
KXG32803	Sorghum	cytosol	53.9	59.28
EES00989	Sorghum	cytosol	52.27	57.14
VIT_01s0026g00210.t01	Wine grape	cytosol	60.62	56.9
KXG20268	Sorghum	cytosol	50.27	53.17
EES13852	Sorghum	peroxisome	37.57	40.99
KXG26485	Sorghum	peroxisome	37.02	40.32
KXG29578	Sorghum	mitochondrion	35.93	37.57
EES13911	Sorghum	cytosol	26.13	28.92
EER95994	Sorghum	mitochondrion	27.59	28.15
EER98972	Sorghum	cytosol, peroxisome, plasma membrane	25.05	27.11
EER99950	Sorghum	endoplasmic reticulum	26.5	24.62

Protein Annotations

Gene3D:3.40.309.10	Gene3D:3.40.605.10	MapMan:50.1.2	EMBL:AB084897	InterPro:Ald_DH/histidinol_DH	InterPro:Ald_DH_C
InterPro:Ald_DH_CS_CYS	InterPro:Ald_DH_CS_GLU	InterPro:Ald_DH_N	InterPro:Aldehyde_DH_dom	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0016620	GO:GO:0055114	InterPro:IPR016162
InterPro:IPR016163	EnsemblPlants:KXG30827	ProteinID:KXG30827	ProteinID:KXG30827.1	ProteinID:OQU85466.1	PFAM:PF00171
ScanProsite:PS00070	ScanProsite:PS00687	PANTHER:PTHR11699	PANTHER:PTHR11699:SF225	UniProt:Q8LST5	EnsemblPlantsGene:SORBI_3004G250900
SUPFAM:SSF53720	UniParc:UPI00000A67CA	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr4:+:59720135..59725595

Molecular Weight (calculated)

58798.3 Da

IEP (calculated)

7.119

GRAVY (calculated)

-0.002

Length

551 amino acids

Sequence
(BLAST)

001: MAARRAASSV LSRFLLTRPS PSPSPASAAS PAGKSALLGA GGPLHRFSTA PAAAAATAEE PIQPAVEVKH TQLLINGNFV DAASGKTFPT LDPRTGEVIA
101: RVAEGDSEDI DRAVAAARRA FDEGPWPRMT AYERCRVLLR FADLIERHAE EIAALETWDN GKTLAQAAGA EVPMVARCIR YYAGWADKIH GLVVPGDGAH
201: HVQVLHEPVG VAGQIIPWNF PLLMFAWKVG PALACGNTVV LKTAEQTPLS ALYVANLLHE AGLPEGVLNV VSGFGPTAGA ALCSHMGVDK LAFTGSTGTG
301: QIVLELAARS NLKPVTLELG GKSPFVVMDD ADVDQAVELA HQAVFFNQGQ CCCAGSRTFV HERVYDEFVE KSKARALKRV VGDPFRNGVE QGPQIDGDQF
401: NKILRYVQSG VDSGATLVTG GDRVGSRGFY IQPTVFADAK DDMKIAREEI FGPVQTILKF SGMEEVIRRA NATHYGLAAG VFTRSLDAAN TLSRALRAGT
501: VWVNCYDVFD ATIPFGGYKM SGVGREKGVY ALRNYLQTKA VVTPIKDPAW L

Best Arabidopsis Sequence Match ( AT3G48000.1 )
(BLAST)

001: MAARRVSSLL SRSFSASSPL LFRSQGRNCY NGGILRRFGT SSAAAEEIIN PSVQVSHTQL LINGNFVDSA SGKTFPTLDP RTGEVIAHVA EGDAEDINRA
101: VKAARTAFDE GPWPKMSAYE RSRVLLRFAD LVEKHSEELA SLETWDNGKP YQQSLTAEIP MFARLFRYYA GWADKIHGLT IPADGNYQVH TLHEPIGVAG
201: QIIPWNFPLL MFAWKVGPAL ACGNTIVLKT AEQTPLTAFY AGKLFLEAGL PPGVLNIVSG FGATAGAALA SHMDVDKLAF TGSTDTGKVI LGLAANSNLK
301: PVTLELGGKS PFIVFEDADI DKAVELAHFA LFFNQGQCCC AGSRTFVHEK VYDEFVEKSK ARALKRVVGD PFRKGIEQGP QIDLKQFEKV MKYIKSGIES
401: NATLECGGDQ IGDKGYFIQP TVFSNVKDDM LIAQDEIFGP VQSILKFSDV DEVIKRANET KYGLAAGVFT KNLDTANRVS RALKAGTVWV NCFDVFDAAI
501: PFGGYKMSGN GREKGIYSLN NYLQIKAVVT ALNKPAWI

Arabidopsis Description

ALDH2B4Aldehyde dehydrogenase family 2 member B4, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9SU63]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.