Factsheet for VIT_01s0026g00220.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 8

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_01s0137g00080.t01	Wine grape	cytosol	65.32	89.9
VIT_14s0066g01550.t01	Wine grape	mitochondrion	80.37	81.87
VIT_17s0000g08070.t01	Wine grape	mitochondrion	80.37	81.41
KRG99327	Soybean	mitochondrion	79.63	80.97
KRH45689	Soybean	nucleus	79.27	80.6
KRH74615	Soybean	mitochondrion	78.72	79.74
KRH69545	Soybean	mitochondrion	78.17	79.04
GSMUA_Achr3P06170_001	Banana	mitochondrion	76.51	78.38
Solyc05g005700.2.1	Tomato	mitochondrion, unclear	75.41	77.69
PGSC0003DMT400010555	Potato	mitochondrion	75.41	77.69
Solyc08g068190.2.1	Tomato	nucleus, unclear	75.96	77.53
AT1G23800.1	Thale cress	mitochondrion	75.41	76.97
Os06t0270900-01	Rice	mitochondrion	77.25	76.68
Bra024619.1-P	Field mustard	mitochondrion	75.41	76.68
CDY57318	Canola	mitochondrion	75.23	76.35
KXG19772	Sorghum	mitochondrion	77.8	76.26
CDX91724	Canola	mitochondrion	75.05	76.16
Bra016330.1-P	Field mustard	mitochondrion	74.86	75.98
GSMUA_Achr5P05290_001	Banana	mitochondrion	75.41	75.83
HORVU6Hr1G072830.2	Barley	peroxisome	71.38	75.83
TraesCS7A01G210100.1	Wheat	mitochondrion	76.33	75.77
TraesCS7D01G211900.1	Wheat	mitochondrion	76.33	75.77
CDY47634	Canola	mitochondrion	75.23	75.37
TraesCS7B01G116800.1	Wheat	mitochondrion	76.33	75.36
HORVU7Hr1G042880.1	Barley	mitochondrion	75.41	74.86
TraesCS6D01G272400.1	Wheat	mitochondrion	73.58	73.58
PGSC0003DMT400010556	Potato	plastid	32.29	73.33
Os02t0730000-02	Rice	mitochondrion	73.76	72.69
CDY61548	Canola	cytosol, peroxisome	73.94	72.61
TraesCS6B01G321400.1	Wheat	mitochondrion	56.88	72.26
KXG30827	Sorghum	mitochondrion, plastid	72.66	71.87
Zm00001d045706_P001	Maize	mitochondrion	75.96	70.65
PGSC0003DMT400037582	Potato	mitochondrion	74.68	68.52
Zm00001d051754_P003	Maize	cytosol	72.11	67.88
VIT_01s0026g00210.t01	Wine grape	cytosol	69.72	64.74
VIT_14s0066g02410.t01	Wine grape	cytosol, peroxisome, plastid	36.7	40.16
VIT_17s0000g07650.t01	Wine grape	peroxisome	37.06	40.16
VIT_17s0000g07660.t01	Wine grape	cytosol	17.61	38.55
VIT_19s0085g00880.t01	Wine grape	plastid	35.23	36.23
VIT_19s0085g00860.t01	Wine grape	cytosol, mitochondrion, peroxisome	31.74	36.04
VIT_19s0085g00870.t01	Wine grape	cytosol	31.01	34.28
VIT_11s0037g00070.t01	Wine grape	cytosol	27.34	30.04
VIT_04s0008g05810.t01	Wine grape	cytosol	26.42	29.03
VIT_03s0132g00200.t01	Wine grape	mitochondrion	27.71	28.01
VIT_11s0016g00900.t01	Wine grape	cytosol	23.67	25.39
VIT_05s0077g01060.t01	Wine grape	vacuole	26.42	24.28
VIT_09s0002g01010.t01	Wine grape	cytosol	18.9	22.79
VIT_03s0132g00230.t01	Wine grape	cytosol	20.73	19.55
VIT_00s0218g00070.t01	Wine grape	cytosol	28.81	11.38

Protein Annotations

EntrezGene:100267386	wikigene:100267386	Gene3D:3.40.309.10	Gene3D:3.40.605.10	MapMan:50.1.2	InterPro:Ald_DH/histidinol_DH
InterPro:Ald_DH_C	InterPro:Ald_DH_CS_CYS	InterPro:Ald_DH_CS_GLU	InterPro:Ald_DH_N	InterPro:Aldehyde_DH_dom	ProteinID:CCB56660
ProteinID:CCB56660.1	UniProt:F6HPN2	EMBL:FN596002	GO:GO:0003674	GO:GO:0003824	GO:GO:0004029
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006464
GO:GO:0006511	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0009056
GO:GO:0009987	GO:GO:0016491	GO:GO:0016567	GO:GO:0016620	GO:GO:0019538	GO:GO:0046872
GO:GO:0055114	InterPro:IPR016162	InterPro:IPR016163	EntrezGene:LOC100267386	wikigene:LOC100267386	PFAM:PF00171
ScanProsite:PS00070	ScanProsite:PS00687	PANTHER:PTHR11699	PANTHER:PTHR11699:SF225	SUPFAM:SSF53720	TIGR:TC63185
UniParc:UPI0002108B42	ArrayExpress:VIT_01s0026g00220	EnsemblPlantsGene:VIT_01s0026g00220	EnsemblPlants:VIT_01s0026g00220.t01	unigene:Vvi.12364	RefSeq:XP_002263479
RefSeq:XP_002263479.1	RefSeq:XP_003631254	RefSeq:XP_003631254.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr1:-:8860707..8865414

Molecular Weight (calculated)

59080.7 Da

IEP (calculated)

7.523

GRAVY (calculated)

-0.053

Length

545 amino acids

Sequence
(BLAST)

001: MTIPRISSLL SRSFTSSASS ALLSSIGRNS SRRGGIFRYS TAAVVEEPIN PSVNVNYTQL LINGQFVDAA TGKTFETLDP RTGNVIASVA EGDAEDVNRA
101: VSAARKAFDE GPWPRMSPYE RSKILLRFAD LLEKHNDEIA ALETWDNGKP FEQAAKAEVP LVIRLMRYYA GWADKIHGLT VPADGLHQVQ TLHEPIGVAG
201: QIIPWNFPLL MYAWKIGPAL ACGNTIVLKT AEQTPLSALY ASKLLHEAGL PPGVLNVVSG YGPTAGAALA SHMDVDKLAF TGSTATGKIV LQLAARSNLK
301: PVTLELGGKS PFIVCEDANV DEAVELAHFA LFFNQGQCCC AGSRTFVHES IYDEFVEKAK ARALRRTVGD PFKAGIEQGP QIDSDQFEKI LRYIRSGVEN
401: GATLETGGER FGKEGFFIKP TVFSNVQDGM LIAQDEIFGP VQSILKFKDL GEVIRRANAT SYGLAAGVFT QNLDTANTLT RALKVGTVWI NCFDVFDAAI
501: PFGGYKMSGH GREKGIYSLQ NYLQVKAVIT PLKNPACQVA RIRQS

Best Arabidopsis Sequence Match ( AT3G48000.1 )
(BLAST)

001: MAARRVSSLL SRSFSASSPL LFRSQGRNCY NGGILRRFGT SSAAAEEIIN PSVQVSHTQL LINGNFVDSA SGKTFPTLDP RTGEVIAHVA EGDAEDINRA
101: VKAARTAFDE GPWPKMSAYE RSRVLLRFAD LVEKHSEELA SLETWDNGKP YQQSLTAEIP MFARLFRYYA GWADKIHGLT IPADGNYQVH TLHEPIGVAG
201: QIIPWNFPLL MFAWKVGPAL ACGNTIVLKT AEQTPLTAFY AGKLFLEAGL PPGVLNIVSG FGATAGAALA SHMDVDKLAF TGSTDTGKVI LGLAANSNLK
301: PVTLELGGKS PFIVFEDADI DKAVELAHFA LFFNQGQCCC AGSRTFVHEK VYDEFVEKSK ARALKRVVGD PFRKGIEQGP QIDLKQFEKV MKYIKSGIES
401: NATLECGGDQ IGDKGYFIQP TVFSNVKDDM LIAQDEIFGP VQSILKFSDV DEVIKRANET KYGLAAGVFT KNLDTANRVS RALKAGTVWV NCFDVFDAAI
501: PFGGYKMSGN GREKGIYSLN NYLQIKAVVT ALNKPAWI

Arabidopsis Description

ALDH2B4Aldehyde dehydrogenase family 2 member B4, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9SU63]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.