Factsheet for VIT_17s0000g07650.t01

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 2
plastid 2
peroxisome 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_17s0000g07660.t01	Wine grape	cytosol	43.34	87.55
AT1G74920.1	Thale cress	cytosol, peroxisome, plastid	81.31	81.64
KRH57015	Soybean	endoplasmic reticulum	78.33	80.74
CDX68159	Canola	plastid	80.12	80.44
CDX85862	Canola	cytosol, peroxisome, plastid	80.12	80.28
Bra003781.1-P	Field mustard	plastid	79.92	80.24
GSMUA_Achr9P16120_001	Banana	peroxisome	79.52	79.21
KRH54453	Soybean	endoplasmic reticulum	78.73	78.73
Os08t0424500-01	Rice	plastid	77.73	77.73
Zm00001d032257_P001	Maize	extracellular	77.73	77.27
EES13852	Sorghum	peroxisome	77.34	77.03
Zm00001d050339_P001	Maize	extracellular	76.74	76.44
Os04t0464200-01	Rice	peroxisome	75.55	75.25
VIT_14s0066g02410.t01	Wine grape	cytosol, peroxisome, plastid	74.35	75.1
TraesCS6A01G371100.1	Wheat	golgi, nucleus, unclear	74.95	75.1
TraesCS6B01G408100.1	Wheat	mitochondrion	74.95	74.95
TraesCS6D01G355000.2	Wheat	golgi	74.75	74.75
Zm00001d025626_P002	Maize	mitochondrion	75.15	74.7
KXG26485	Sorghum	peroxisome	74.75	74.31
TraesCS2D01G326900.1	Wheat	golgi, unclear	73.36	72.92
HORVU2Hr1G080970.1	Barley	peroxisome	73.16	72.73
TraesCS2B01G346000.1	Wheat	mitochondrion	44.33	71.7
HORVU6Hr1G087460.1	Barley	plastid	74.95	71.67
PGSC0003DMT400063205	Potato	cytosol, peroxisome, plastid	71.57	71.29
Solyc03g113800.2.1	Tomato	plastid	71.37	71.09
PGSC0003DMT400083025	Potato	cytosol	70.58	70.44
Solyc06g071290.2.1	Tomato	plastid	69.38	69.25
TraesCS2A01G336000.1	Wheat	peroxisome	73.16	67.65
VIT_01s0137g00080.t01	Wine grape	cytosol	30.62	38.89
VIT_14s0066g01550.t01	Wine grape	mitochondrion	40.56	38.13
VIT_19s0085g00860.t01	Wine grape	cytosol, mitochondrion, peroxisome	35.79	37.5
VIT_01s0026g00220.t01	Wine grape	mitochondrion	40.16	37.06
VIT_17s0000g08070.t01	Wine grape	mitochondrion	39.56	36.99
VIT_19s0085g00880.t01	Wine grape	plastid	38.17	36.23
VIT_19s0085g00870.t01	Wine grape	cytosol	34.59	35.29
VIT_01s0026g00210.t01	Wine grape	cytosol	35.59	30.49
VIT_11s0037g00070.t01	Wine grape	cytosol	30.02	30.44
VIT_04s0008g05810.t01	Wine grape	cytosol	29.62	30.04
VIT_03s0132g00200.t01	Wine grape	mitochondrion	29.03	27.09
VIT_11s0016g00900.t01	Wine grape	cytosol	26.44	26.18
VIT_05s0077g01060.t01	Wine grape	vacuole	29.82	25.3
VIT_09s0002g01010.t01	Wine grape	cytosol	19.48	21.68
VIT_03s0132g00230.t01	Wine grape	cytosol	19.88	17.3
VIT_00s0218g00070.t01	Wine grape	cytosol	28.43	10.36

Protein Annotations

EntrezGene:100246770	wikigene:100246770	Gene3D:3.40.309.10	Gene3D:3.40.605.10	MapMan:9.4.1.2	InterPro:Ald_DH/histidinol_DH
InterPro:Ald_DH_C	InterPro:Ald_DH_CS_CYS	InterPro:Ald_DH_CS_GLU	InterPro:Ald_DH_N	InterPro:Aldehyde_DH_dom	ProteinID:CBI15093
ProteinID:CBI15093.3	UniProt:D7SHY3	EMBL:FN594950	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0016620	GO:GO:0055114	InterPro:IPR016162	InterPro:IPR016163
EntrezGene:LOC100246770	wikigene:LOC100246770	PFAM:PF00171	ScanProsite:PS00070	ScanProsite:PS00687	PANTHER:PTHR43860
PANTHER:PTHR43860:SF3	SUPFAM:SSF53720	TIGR:TC58388	UniParc:UPI00015C8306	ArrayExpress:VIT_17s0000g07650	EnsemblPlantsGene:VIT_17s0000g07650
EnsemblPlants:VIT_17s0000g07650.t01	unigene:Vvi.8989	RefSeq:XP_002283690	RefSeq:XP_002283690.1	RefSeq:XP_003634296	RefSeq:XP_003634296.1

Description

No Description!

Coordinates

chr17:-:8614309..8620601

Molecular Weight (calculated)

54623.8 Da

IEP (calculated)

5.405

GRAVY (calculated)

-0.008

Length

503 amino acids

Sequence
(BLAST)

001: METKIPCRQL FIDGKWVEPI TKRRIPVINP ATEQTIGLIP AATGEDVELA VDAARRAFAR NKGADWAKAP GAVRAKYLRA IAAKITERKT ELAKLEALDC
101: GKPLDEAAWD IDDVASCFEY FADHAEALDA QQKAPLSLPM ETFKCHILKE PVGVVGLITP WNYPLLMATW KVAPALAAGC TAILKPSELA SVTCLELADV
201: CIEVGLPPGV LNILTGLGSE AGAPLSSHPH VDKIAFTGST VTGSKIMTAA AQLVKPVSLE LGGKSPILVF EDVDLDKAAE WTAFGCFWTN GQICSATSRL
301: LVHESIAAEF LDKLVKWTKN IKISDPFEEG CRLGPVVSRE QYEKILKLVS TAKSEGATIL CGGGRPQHLK MGFYIEPTII SDVTTSMQIW REEVFGPVLC
401: VKTFSSEDEA IELANDTQYG LAGAVISNDL ERCERVSKAL NAGIVWINCS QPCFCQAPWG GNKRSGFGRE LGPRGLDNYL SVKQVTQYLS NEPWGWYQSP
501: SKL

Best Arabidopsis Sequence Match ( AT3G48170.1 )
(BLAST)

001: MAITVPRRQL FIGGQWTEPV LRKTLPVVNP ATEDIIGYIP AATSEDVELA VEAARKAFTR NNGKDWARAT GAVRAKYLRA IAAKVIERKS ELANLEAIDC
101: GKPLDEAAWD MDDVAGCFEY YADLAEGLDA KQKTPLSLPM DTFKGYILKE PIGVVGMITP WNYPLLMAVW KVAPSLAAGC TAILKPSELA SLTCLELADI
201: CREVGLPPGV LNILTGLGTE AGAPLASHPH VDKIVFTGST TTGSSIMTSA AKLVKPVSLE LGGKSPIIVF DDVDIDKAVE WTMFGCFWTN GQICSATSRL
301: LVHERIADEF LDKLVKWTKN IKISDPFEEG CRLGPVVSKG QYERVLKFVS NARNEGATVL CGGVRPEHLK KGYFVEPAIV SNVTTSMEIW REEVFGPALC
401: VKTFSTEDEA IQLANDSQYG LAGAVLSNDL ERCDRVSKAF QAGIVWVNCS QPCFCQAPWG GTKRSGFGRE LGEWGLENYL SVKQVTQYIS DEPWGWYKPP
501: SKL

Arabidopsis Description

ALDH10A9Betaine aldehyde dehydrogenase 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9STS1]
SUBAcon: [mitochondrion,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.