Factsheet for VIT_11s0016g00900.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH12550	Soybean	mitochondrion	83.86	83.86
GSMUA_Achr8P23610_001	Banana	cytosol, peroxisome, plastid	84.25	83.11
KRH37502	Soybean	endoplasmic reticulum	83.27	83.1
PGSC0003DMT400058895	Potato	cytosol	82.48	82.32
Os09t0440300-01	Rice	cytosol, mitochondrion, peroxisome, plastid	81.1	80.94
TraesCS5D01G218400.1	Wheat	peroxisome	80.91	80.75
TraesCS5B01G210100.1	Wheat	peroxisome	80.91	80.75
Bra030906.1-P	Field mustard	cytosol, peroxisome, plastid	79.92	80.56
CDY61473	Canola	cytosol, peroxisome, plastid	79.92	80.56
EER98972	Sorghum	cytosol, peroxisome, plasma membrane	80.71	80.55
TraesCS5A01G213600.1	Wheat	golgi, unclear	80.51	80.35
Zm00001d005818_P001	Maize	cytosol	80.51	80.04
AT1G54100.2	Thale cress	peroxisome	79.92	79.92
CDY02483	Canola	cytosol, peroxisome, plastid	80.31	79.38
Zm00001d003983_P002	Maize	cytosol	32.48	76.74
Solyc03g122310.2.1	Tomato	nucleus	79.72	76.27
HORVU5Hr1G062090.1	Barley	plastid	80.31	71.33
CDY51401	Canola	cytosol	30.51	70.45
VIT_09s0002g01010.t01	Wine grape	cytosol	58.27	65.49
Bra037964.1-P	Field mustard	cytosol	29.53	65.22
Zm00001d050495_P001	Maize	plastid	28.74	48.67
Zm00001d008814_P001	Maize	cytosol	15.16	34.68
VIT_17s0000g07660.t01	Wine grape	cytosol	14.37	29.32
VIT_19s0085g00860.t01	Wine grape	cytosol, mitochondrion, peroxisome	25.39	26.88
VIT_17s0000g07650.t01	Wine grape	peroxisome	26.18	26.44
VIT_01s0137g00080.t01	Wine grape	cytosol	20.28	26.01
VIT_14s0066g01550.t01	Wine grape	mitochondrion	27.17	25.79
VIT_17s0000g08070.t01	Wine grape	mitochondrion	27.17	25.65
VIT_19s0085g00880.t01	Wine grape	plastid	26.57	25.47
VIT_19s0085g00870.t01	Wine grape	cytosol	24.61	25.36
VIT_14s0066g02410.t01	Wine grape	cytosol, peroxisome, plastid	24.8	25.3
VIT_11s0037g00070.t01	Wine grape	cytosol	23.23	23.79
VIT_01s0026g00220.t01	Wine grape	mitochondrion	25.39	23.67
VIT_04s0008g05810.t01	Wine grape	cytosol	23.03	23.59
VIT_03s0132g00200.t01	Wine grape	mitochondrion	22.83	21.52
VIT_01s0026g00210.t01	Wine grape	cytosol	23.23	20.1
VIT_05s0077g01060.t01	Wine grape	vacuole	20.87	17.88
VIT_03s0132g00230.t01	Wine grape	cytosol	15.94	14.01
VIT_00s0218g00070.t01	Wine grape	cytosol	23.62	8.7

Protein Annotations

EntrezGene:100252622	wikigene:100252622	Gene3D:3.40.309.10	Gene3D:3.40.605.10	MapMan:50.1.2	InterPro:Ald_DH/histidinol_DH
InterPro:Ald_DH_C	InterPro:Ald_DH_CS_GLU	InterPro:Ald_DH_N	InterPro:Aldehyde_DH_dom	ProteinID:CBI27794	ProteinID:CBI27794.3
UniProt:D7TCD6	EMBL:FN595756	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152
GO:GO:0009269	GO:GO:0009628	GO:GO:0009651	GO:GO:0009719	GO:GO:0009737	GO:GO:0016491
GO:GO:0016620	GO:GO:0055114	InterPro:IPR016162	InterPro:IPR016163	EntrezGene:LOC100252622	wikigene:LOC100252622
PFAM:PF00171	ScanProsite:PS00687	PANTHER:PTHR43521	PANTHER:PTHR43521:SF1	SUPFAM:SSF53720	TIGR:TC65177
UniParc:UPI00019842BF	ArrayExpress:VIT_11s0016g00900	EnsemblPlantsGene:VIT_11s0016g00900	EnsemblPlants:VIT_11s0016g00900.t01	unigene:Vvi.6085	RefSeq:XP_002278093
RefSeq:XP_002278093.1	RefSeq:XP_010656112.1	RefSeq:XP_010656113.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr11:-:787578..794926

Molecular Weight (calculated)

54593.1 Da

IEP (calculated)

5.136

GRAVY (calculated)

0.068

Length

508 amino acids

Sequence
(BLAST)

001: MSFERKEYQF LAEIGVGPAN PGCYINGEWK ARGPLVSSVN PSNNQRIAVV TEASIEDYEE GLMACSEAAK TWMKIPAPKR GEIVRQIGEA LRAKLGSLGR
101: LVSLEMGKIL AEGIGEVQEI VDMCDYAVGL SRQINGSIIP SERPDHMMCE VWNPMGIVGV ITAFNFPCAV LGWNACLALV CGNCVVWKGA PTTPLVTIAV
201: TKLVAEVLEK NNLPGAIFTS FCGGAEIGEA ISKDARIPLV SFTGSSKVGL MVQQAVNQRF GKCLLELSGN NAIIIMEDAD IGLAVRSVLF AAVGTAGQRC
301: TTCRRLLVHE SIYETVLNQL IDVYKQVKMG DPLEKSTLVG PLHTRASKEN FEKGIEIIKF QGGNILIGGS TVESEGNFVQ PTIVEISPNA SVVKEELFGP
401: VLYVMKFQTF EEAVEMNNSV PQGLSSSIFT RKPEVIFKWI GPHGSDCGIV NVNIPTNGAE IGGAFGGEKA TGGGREAGSD SWKQYMRRST CTINYGNELP
501: LAQGINFG

Best Arabidopsis Sequence Match ( AT1G54100.1 )
(BLAST)

001: MGSANNEYEF LSEIGLTSHN LGSYVAGKWQ ANGPLVSTLN PANNQPIAQV VEASLEDYEQ GLKACEEAAK IWMQVTAPKR GDIVRQIGDA LRSKLDYLGR
101: LLSLEMGKIL AEGIGEVQEV IDMCDFAVGL SRQLNGSVIP SERPNHMMLE MWNPLGIVGV ITAFNFPCAV LGWNACIALV CGNCVVWKGA PTTPLITIAM
201: TKLVAEVLEK NNLPGAIFTA MCGGAEIGEA IAKDTRIPLV SFTGSSRVGS MVQQTVNARS GKTLLELSGN NAIIVMDDAD IQLAARSVLF AAVGTAGQRC
301: TTCRRLLLHE SVYDKVLEQL LTSYKQVKIG NPLEKGTLLG PLHTPESKKN FEKGIEVIKS QGGKILTGGK AVEGEGNFVE PTIIEISADA AVVKEELFAP
401: VLYVLKFKSF GEAVAINNSV PQGLSSSIFT RNPENIFRWI GPLGSDCGIV NVNIPTNGAE IGGAFGGEKA TGGGREAGSD SWKQYMRRST CTINYGNELP
501: LAQGINFG

Arabidopsis Description

ALDH7B4ALDH7B4 [Source:UniProtKB/TrEMBL;Acc:A0A178W3F2]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.